Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_019408.1
Length=223720
Score E
Sequences producing significant alignments: (Bits) Value
seq9463 462 3e-125
seq9548 340 3e-88
seq9477 315 1e-80
seq10549 239 6e-58
seq12126 102 1e-16
seq10139 102 1e-16
seq9576 98.7 1e-15
seq7411 96.9 5e-15
seq7053 95.1 2e-14
seq9875 84.2 3e-11
>seq9463
Length=63583
Score = 462 bits (512), Expect = 3e-125
Identities = 774/1091 (71%), Gaps = 55/1091 (5%)
Strand=Plus/Plus
Query 139505 GCGGCACTCGACGCCTTCGGTCGCCTTGATCTGGTCTTCCAGCGTGAAGGCGGC-CTTGG 139563
|||||| |||||||| ||||| || || ||||| |||| ||||||| || | |||||
Sbjct 39960 GCGGCATTCGACGCCCTCGGTGGCGCGGACGTGGTCCTCCACCGTGAAG-CGCCGCTTGG 40018
Query 139564 CGGCGGTGCGCGACATGGTCCGCCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCGGCGT 139623
| || |||| ||| | ||| || |||||||||||||| | |||||||||||| ||||
Sbjct 40019 CCTCGTTGCGGCTCATCGCCCGGCCGGCGCCGTGCGAGCAGGTGCAGAACGAGTCCGCGT 40078
Query 139624 TGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATGCCGAACT 139683
| |||||||||||||||||| | || ||| ||||||||||||||||||||||| | |
Sbjct 40079 TCCCCTTGCCGCGCACGATGAACGAGCGGGCGCCCATCGAGCCGGGGATGATGCCCAGTT 40138
Query 139684 GGTCCTTCTGAGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGGA 139743
| ||| ||| |||||| ||||||||||| ||||| ||| || | |||||||
Sbjct 40139 CGCCCTCGCCGGCCCGCACCGCCCCCTTGCGGGTGACGAACACCGTCTTGCCGAAGTGAT 40198
Query 139744 ACTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTT--GAAGGG 139801
|||| | |||||||||||||||||||||||||| || | |||||| | |||
Sbjct 40199 GCTCCCGCGCGACGTAGTTGTGGTGGCAGTTCACCG---CCGTCTCCGTCGTCGCCAGGT 40255
Query 139802 C--GGCAGGCCCGAGGCGCGCATGGCGTCCAGGACCCGGATCATCATCATCTCGCGGTTG 139859
| || | ||| || |||| || |||| ||| || |||||||| ||||||||||
Sbjct 40256 CCGGGAACGCCTGA----CGCAGCACGCCCAGCACCTGGTCCATCATCACCTCGCGGTTG 40311
Query 139860 ATCCGCGCGAAGTCCTGACCCCAGGCGACGGCTTCCACGTAGTCGTAGAATTCC-GGCTC 139918
| ||| || ||| ||||| || || || | ||||||| ||| || |||
Sbjct 40312 GCGAGGGCGTAGGTCTGCGCCCAGTTCACCGCCTCGATGTAGTCGGTGAAGCCCTCGCT- 40370
Query 139919 GCCTTCCGACAGCCACGCGAGGTCCTTGTCGAGCGGCTTCTGACCGTCCCGACGCAGCAT 139978
||| | || ||| | |||||||| | ||| || | | ||| | || ||| ||||
Sbjct 40371 GCCCTGCGGCAGGTAGGCGAGGTCTTGGTCCGGCAGGT--TGA-TGAACCAGCGCCGCAT 40427
Query 139979 CATCTC-CTTGGCCTTCTCGATGAAGATACG-GCCGATGGTGTTGCCGACGCCGCGCGAG 140036
|| | ||||||| |||| |||| || | ||||| |||||| || |||||||||
Sbjct 40428 -GTCGCGCTTGGCCAGTTCGACGAAG-TAGGAGCCGAACCGGTTGCCCACCCCGCGCGAG 40485
Query 140037 CCCGAGTGGAGCATCACCCAGACGCGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGG 140096
|| ||||| ||||||||||| | ||| || || || ||||| | |||||||||||||
Sbjct 40486 CCGGAGTGCAGCATCACCCAAAGGCGGCCTTCTTCATCCAGGCAAAGCTCGATGAAGTGG 40545
Query 140097 TTGCCGCCGCCCAGCGTGCCCAGTTGGACGA-----CGCTGTTG-GCGTTCTTGAGGGTC 140150
|||||| ||||| |||||||| ||| ||| ||||| || || |||| |
Sbjct 40546 TTGCCGGTCCCCAGGGTGCCCAGGTGGCCGAAGCCGCGCTGGTGCGCCGCCTTGGG---- 40601
Query 140151 TTGTACTTGTCG--CAGAGCTTCTCGAACCGGGCTTCCAGGCCCGAGTCGACCCACTTG- 140207
|| |||| || || ||||| | || ||||| ||| || || ||||||||
Sbjct 40602 --GTGCTTGGCGATCACCGCTTC-ATAGCCCGGCTT-CAG---CG---CGGCCCACTTGT 40651
Query 140208 CG-----CATGATCG--AGTTCGGGATGCCGCTACGCCCGT-TCCAGCCGCCCGACGGAC 140259
|| || | || | || || ||| ||||| | || |||||| |
Sbjct 40652 CGGCCGCCAGGGCCGGCGGCTC-GGCCGCCCAGGCGCCCTTGTCGTTGCGCCCGCCATTG 40710
Query 140260 CCGG-CCCGCCGTGCGGGACGGCGTGCTCGATCAGCGAGCGCAGCTTGGCGAGGCTGTCG 140318
||| || ||| |||| || || |||||| || |||||| || || ||
Sbjct 40711 TCGGTCCGGCCAAGCGGCACCGCCGCCTCGATGGCGGACCGCAGCCCCGCCAGCGAATCC 40770
Query 140319 GGCAGGTCCGAGGCCTTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATGTCCACG 140378
||||| | | |||| | |||||| | ||| ||||||||||||||||||||||| |||
Sbjct 40771 GGCAGATGCTCGGCCCGGATCGAGGTCCACACCGCCATCATGCCGCAGCCGATGTCGACG 40830
Query 140379 CCCACGGCCGCCGGGATGATGGCGCCCTTGGTCGGGATCACCGAGCCCACGGTCGAGCCG 140438
|| || |||||||||||||| || || ||||||||| |||||||| ||||| | |||
Sbjct 40831 CCGACCGCCGCCGGGATGATCGCCCCGACGGTCGGGATGACCGAGCCGACGGTGGCGCCC 40890
Query 140439 ATGCCCATGTGGACGTCCGGCATCAGGGCCACATGCGAGTGGATGAACGGCAGGGCGGCG 140498
|||||| ||| ||||| ||||||| ||||| ||| |||||||||||||||| ||||
Sbjct 40891 ATGCCCCAGTGCACGTCGGGCATCACCGCCACGTGCTTGTGGATGAACGGCAGGCTGGCG 40950
Query 140499 AGGTTGTGCGCCTGCACCTGGGCGGGCTGCTCGAAGGTCACACCCCGGACCCAGGCCTTG 140558
| |||| || |||| | ||| || |||| | ||| |||||| ||||||||||
Sbjct 40951 ACGTTGCGCAGCTGCTTCATGGCCAACTCTTCGATCGGCACGCCCCGGGTCCAGGCCTTG 41010
Query 140559 ATCACCCCGCC 140569
||| | ||||
Sbjct 41011 ATCGGCGCGCC 41021
>seq9548
Length=123183
Score = 340 bits (376), Expect = 3e-88
Identities = 520/734 (71%), Gaps = 18/734 (2%)
Strand=Plus/Plus
Query 86191 GTAGGGCTCGCCCGTCTGCACGCGCGTCTCGATCAGCAGGCGCCACAGGTCGCGCGCCCG 86250
|||||||||||| ||||||| ||| |||||| | | |||||||| |||| ||
Sbjct 105009 GTAGGGCTCGCCGGTCTGCAGGCGGATCTCGAGGATCTTCTGCCACAGGCCGCGGGCGTC 105068
Query 86251 TTCCATGCGGATCACCTCGCCCGTCTTGGGCGAGCGCAGGGCGAAGTCGG--TGTCGTCG 86308
| |||| | ||| ||||| |||||||||||| ||||| |||| ||| || |||||
Sbjct 105069 GACGTTGCGCACCACTTCGCCGGTCTTGGGCGAGAGCAGGCCGAA--CGGCTTGCCGTCG 105126
Query 86309 CGCACCGCGATCATGAACTCGTCGGTGACGTTGACCGCATTGTGCAGGTTGGTGATCTTG 86368
||||| || ||||||| ||||||||| || | | |||||||||| | ||||
Sbjct 105127 CGCACGGCCTCCATGAACGCGTCGGTGATCGAGATTCCGTGGTGCAGGTTGAGGGACTTG 105186
Query 86369 CGGTTGTGGTCCCCGCCCGTCGGCTTGCGCGCGGTGATGAACTCGCGGATTTCGGGGTGG 86428
|||||| ||| || || ||||||||| || |||||| |||||||||||||
Sbjct 105187 CGGTTGAAGTCTCC---CGACGGCTTGCGGATTTCGAGGAACTCTTCGATTTCGGGGTGG 105243
Query 86429 TGGATGTCCAGGTAGACGGCGTTGGAGCCCCGGCGCGTACCGCCCTGGCTGACGGCCAGG 86488
||||||||||| ||||| || |||||||||||| | ||||||||||| |||||||
Sbjct 105244 TGGATGTCCAGATAGACCGCCGCCGAGCCCCGGCGCAGGCTGCCCTGGCTGATGGCCAGG 105303
Query 86489 ATCAGGCGGTCGTCCACCGCCATGAACGGGATGACGCCGGTCGACTG---CGAACCCTTG 86545
|||||| ||| ||| ||||| ||||||| |||| | | ||| | |||||
Sbjct 105304 GTCAGGCTGTCCATCACACGGATGAAGGGGATGATGCCGCTGGTCTGGCCCTGGCCCTT- 105362
Query 86546 GAGGTCTTCTCGCCCAGGCCGCGCAGGGCGCCGTAATAGGAGCCGATGCCGCCGCCCATC 86605
| ||||||||| | | ||| | |||| |||||| ||||||||||||||| |
Sbjct 105363 --GACCTTCTCGCCGATGGAGCGGACCCCGCCCCAATAGGTGCCGATGCCGCCGCCGTTG 105420
Query 86606 GACGACAGCCAGATGACCTCGTCATAGTGCTCGGAGATCGACTCGCGGC-TGTCCTCGAT 86664
|| | |||||||| | ||||| || || ||| | || | || || ||
Sbjct 105421 GAGGCCAGCCAGACGTTCTCGTTCCAGACGCCGACGAT-GCCTTCCAGCGAATCGGAGAC 105479
Query 86665 CGCGGTGAGGAAGCAGGAGATCGGCAGGCCACGGGCCGAGCCGCCGTTCGACAGCAGCGG 86724
||| | ||||||||| |||||||||||| || | | ||||||||||||||||| |||
Sbjct 105480 GGCGTTCAGGAAGCAGCTGATCGGCAGGCCGCGATCGGCGCCGCCGTTCGACAGCACCGG 105539
Query 86725 GGTGGCGTACATGAACCAGAGGTTCGAGACGTATTCGTACAGACGCTGGCCGTGCTCGGC 86784
||||| |||||||||||| || |||| ||| ||||| | |||||| |||| |||||
Sbjct 105540 CGTGGCCGGCATGAACCAGAGCTTGGAGATGTAGTCGTAGATGCGCTGGGCGTGGTCGGC 105599
Query 86785 GTCATCCGCAAAGGCCGCACTCGCGCGCGCGAAGGCCTCCTGGGGGGAAGTTTCCCCAGG 86844
||| || || |||| | | |||| ||||| |||| || | | || || ||
Sbjct 105600 GTCGTCGGCGTAGGCGGTGGCCACGCGGGCGAACATGTCCT---GGTACGACTCGCCGGG 105656
Query 86845 CAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGTCGTCGAGCAGGGCGTCGCGGGT 86904
||| || ||||| || || ||| | | ||| ||| || |||||||||||| |
Sbjct 105657 CAGGAGGTAGCGATCCTCCAGCGTCCGCTTGCCGAATTCGGTGATCAGGGCGTCGCGCGC 105716
Query 86905 GAGATCGATCTTGA 86918
| | |||| || ||
Sbjct 105717 GCGGTCGACCTCGA 105730
Score = 282 bits (312), Expect = 6e-71
Identities = 553/815 (68%), Gaps = 53/815 (7%)
Strand=Plus/Plus
Query 84378 GGAAGACGTTCAGGGACTGGCCCTGGCAGATGTCCTCCGTCCGCCCGACGGCCAGCCGCA 84437
|||||||||| |||||||| ||||||||| || |||||| || |||||||| |
Sbjct 104156 GGAAGACGTTGAGGGACTGCGACTGGCAGATCTCGGGCGTCCGGTCGGCGGCCAGCTCGA 104215
Query 84438 CGACCCAGCGCTGGTCGAGTTCCATCGCCGTCTTGTAGACGCGCTTCTTGTGGTCCAGGA 84497
| ||||| ||||| || ||||| | || |||||||||| | ||||| ||
Sbjct 104216 CCACCCAACGCTGATCCAGTTCGAAGGCGGTCTTGTAGATGTCCTTCTCGT--------- 104266
Query 84498 CCGCCGGGTCGACTTCGATGCCCAGGGCCTCGAAGAACTCGACCGAGAAGTGCTGGATCG 84557
|| || || || ||| || | |||||||| ||
Sbjct 104267 ---------------------CCTGG--CT-GAGGAAGTCCAG------GTGCTGGACCG 104296
Query 84558 AGCCCTCGTTGGCGACGATGGTCTTCCAGACCTCATCGGTGTCG-GCGCCCAGGCTCGCC 84616
| || ||||| | | ||| | ||||||| ||||||||| | | ||| || |
Sbjct 104297 ATCCTTCGTTTTCCAGGATCGAGGCCCAGACCGCATCGGTGTTGCGGGCCTTTTCTT-CG 104355
Query 84617 AGCCACGCGCGCAGCCAGCGGTTCTTGACCTGGAACGAACCCGAGAGGGTCTTGTGCAGG 84676
|| | ||| || | ||||||||| ||| || ||||| |||||||||||| |
Sbjct 104356 AGAAGACCTTCCAGGTAGGGATTCTTGACCGCGAAAGAGCCCGACAGGGTCTTGTGCGTG 104415
Query 84677 AAGGTGTTGGCGCGGTTGGGCTCGATCGACGGCGAAGC-GCCGCCGCAGAGGATCGACGA 84735
|| ||||||| || | |||||||| | ||||| | ||||||||||| ||||||
Sbjct 104416 TAGATGTTGGCCGGGATCGGCTCGAT-GCCGGCGCTGGTGCCGCCGCAGATGATCGAGAT 104474
Query 84736 GGAGGCGTTGGGGGCCACCGCCAGCTTGTGGGCGAAGCGCTCGC-----CCGAGC-CTTC 84789
|||||| | ||||| | ||||||||||| | ||| ||||| ||| || | ||
Sbjct 104475 CGAGGCGGTCGGGGCGATGGCCAGCTTGTGCGAGAACCGCTCCATCACGCCGCGCTCCTC 104534
Query 84790 CATGTCAGGGGCCTCGCCGCGCTCGGCGCCCAGGACCAGCGAC--GCCGCGTCGGCCTTG 84847
||| ||| |||||||||| || ||||| ||| | ||| |||||||| |
Sbjct 104535 GGCGTCGGGGCAGGCGCCGCGCTCTTCGGCCAGGGT--GCGGCTGGCCTTGTCGGCCTCG 104592
Query 84848 CGGCGCATGTGGCGGAAGATGGTCTTATTGAGCGTCTCGGCCGCCATGCTCTCGAACGGG 84907
||||||| ||| ||| | | | || || || |||| ||||||||| ||
Sbjct 104593 CGGCGCAGGTGCTTGAACAGCCGCATGTTCCACGACTTGGCCAGGGCGCTCTCGAAGGGC 104652
Query 84908 ATGTCGAGCGACTGGAGCAGCGAGTGGAAGCCCAGCAGGCCCAGGCCCACCGAGCGCTCG 84967
| || | || || | |||||||||||||| |||||||||||||||||| ||||||
Sbjct 104653 ACGTTCTGGCTTTGCAGGAACGAGTGGAAGCCCATCAGGCCCAGGCCCACCGAACGCTCG 104712
Query 84968 CGCACGGCGCTGTAGGAGGCCCGGTGCATCTCGTCCGGCGCGTTGTCGATGAACACCTGG 85027
||| |||| ||| |||| || ||| |||| |||||| ||||||||| ||||
Sbjct 104713 CGCGTGGCGGCGTACTTGGCCGGGCCCATGGCGTCGGGCGCGCGGTCGATGAAGTCCTGC 104772
Query 85028 AGGCAGTTGTCCAGCATGCGCATCAGGTCTTCGATGAAGGTCGGGTGATCCTTCCATTCG 85087
|| |||||| || | |||||| | |||||||| ||||||||| || || ||||||
Sbjct 104773 AGCACGTTGTCGAGGAAGCGCATGACGTCTTCGACGAAGGTCGGATGGTCGCGCCATTCC 104832
Query 85088 ACCCACTTTTCGGCGTTGACGCTCGACAGGCAGCAGACGGCCGTGCGCATCTTGCCGAAC 85147
| |||| ||||||||||| ||||||||||||||||| |||||| ||| |
Sbjct 104833 AGGAACTTCTCGGCGTTGACCGAGGACAGGCAGCAGACGGCGGTGCGCTCGCGGCCCAGG 104892
Query 85148 ACGTCGCGGCCGGTGCCCAGCATGATCTCCGAGCA 85182
||| |||||| ||||||||||||||||||
Sbjct 104893 TGGTCCTTGCCGGTCGGCAGCATGATCTCCGAGCA 104927
>seq9477
Length=73713
Score = 315 bits (348), Expect = 1e-80
Identities = 560/807 (69%), Gaps = 30/807 (4%)
Strand=Plus/Minus
Query 86107 GCAGAGGTTCGACTGGCGAACGCTCAGGCCAAGCTTCTTCTGCCGGTCCGGGAAGTGGCG 86166
||||||||||||||| || || |||| || |||| || ||| | ||||| |||||
Sbjct 23349 GCAGAGGTTCGACTGCCGCACCTTCAGACCCAGCTCCTGCTGGTG--CCGGGGCATGGCG 23292
Query 86167 --GTTGGAGGTGTCGATGAAGTGGATGTAGGGCTCGCCCGTCTGCACGCGCGTCTCGATC 86224
||| | ||||| |||| | ||||||||||| ||||||| ||| ||| | |
Sbjct 23291 CGGTTCACGCTGTCGGAGAAGATCAGATAGGGCTCGCCGGTCTGCAGTCGCAGCTCCAGC 23232
Query 86225 AGCAGGCGCCACAGGTCGCGCGCCCGTTCCATGCGGATCACCTCGCCCGTCTTGGGCGAG 86284
| | |||||||| |||| || || ||| | ||| ||||||||||||||||||
Sbjct 23231 ACCTTCTGCCACAGGGCGCGGGCGTCGACCTCGCGCAGCACTTCGCCCGTCTTGGGCGAG 23172
Query 86285 CGCAGGGCGAAGTCGGTGTCGTCGCGCACCGCGATCATGAACTCGTCGGTGACGTTGACC 86344
|||||| |||| | || ||||||||||||||| |||||| |||||||||| |||||
Sbjct 23171 CGCAGGCCGAACTTCTTGCCGTCGCGCACCGCGAACATGAATTCGTCGGTGATGTTGATG 23112
Query 86345 GCATTGTGCAGGTTGGTGATCTTGCGGTTGTGGTCCCCGCCCGTCGGCTTGCGCGCGGTG 86404
| | ||||||||| | |||||||||| || |||||| |||||||||
Sbjct 23111 CCGTGGTGCAGGTTCAGGGACTTGCGGTTGAAGT---CGCCCGACGGCTTGCGGATTTCA 23055
Query 86405 ATGAACTCGCGGATTTCGGGGTGGTGGATGTCCAGGTAGACGGCGTTGGAGCCCCGGCGC 86464
| |||||| ||| || |||||||||||||| || ||||||||| ||||| ||||||
Sbjct 23054 AGGAACTCCTCGATCTCCGGGTGGTGGATGTCGAGATAGACGGCGGCCGAGCCGCGGCGC 22995
Query 86465 GTACCGCCCTGGCTGACGGCCAGGATCAGGCGGTCGTCCACCGCCATGAACGGGATGACG 86524
|||||| | |||||| |||| ||| ||| ||||| ||||||| |
Sbjct 22994 AGCGAGCCCTGCGAAATCGCCAGGGTCAGCGAGTCCATCACGCGGATGAAGGGGATGATG 22935
Query 86525 CCGGTCGACTGCGAACCCTTG---GAGGTCTTCTCGCCCAGGCCGCGCAGGGCGCCGTAA 86581
|| | | ||| ||||| | | ||||||||| | ||| | | |||| |
Sbjct 22934 CCCGAGGTCTG---ACCCTGGCCCTTGACCTTCTCGCCGATCGAGCGAACGCCGCCCCAG 22878
Query 86582 TAGGAGCCGATGCCGCCGCCCATCGACGACAGCCAGATGACCTCGTCATAG-TGCTCGGA 86640
|||| |||||| |||||||| | | || |||||||| ||||| || | || ||
Sbjct 22877 TAGGTGCCGATACCGCCGCCATTGGCCGCCAGCCAGACATTCTCGTTCCAGACGTTCAGA 22818
Query 86641 GATCGACTCGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGGCAGGCCACGGGC 86700
|| || ||||||| | || ||| | ||||||||| |||||||||||| || |
Sbjct 22817 -ATGCCGTCCAGGCTGTCATTGACCGCATTAAGGAAGCAGCTGATCGGCAGGCCGCGATC 22759
Query 86701 CGAGCCGCCGTTCGACAGCAGCGGGGTGGCGTACATGAACCAGA---GGTTCGAGACGTA 86757
| |||||||||||| |||| ||| ||||| ||||||||| | || || | ||
Sbjct 22758 GGCGCCGCCGTTCGAGAGCACCGGCGTGGCCGGCATGAACCACAAACGGCTC---ATATA 22702
Query 86758 TTCGTACAGACGCTGGCCGTGCTCGGCGTCATCCGCAAAGGCCGCACTCGCGCGCGCGAA 86817
|| || | |||||| |||| |||||||| || || ||||||| ||||||||||
Sbjct 22701 GTCATAGACGCGCTGGGCGTGGTCGGCGTCGTCGGCGAAGGCCGTGGCGACGCGCGCGAA 22642
Query 86818 GGCCTCCTGGGGGGAAGTTTCCCCAGGCAGCAGATAGCG---TTCACGGAGGGTCTGAAG 86874
|||| | | |||| || |||||||| ||||| ||| | |||||
Sbjct 22641 CATGTCCT---GATAGCTTTCGCCCGGCAGCAGGTAGCGGTCTTCCAGCGTGGTCT---T 22588
Query 86875 GGTGAAGTCGTCGAGCAGGGCGTCGCG 86901
| ||||||| ||||||||||||||
Sbjct 22587 GCCGAAGTCGGTCAGCAGGGCGTCGCG 22561
Score = 277 bits (306), Expect = 3e-69
Identities = 554/820 (68%), Gaps = 51/820 (6%)
Strand=Plus/Minus
Query 84366 CGTCGTGCGGGTGGAAGACGTTCAGGGACTGGCCCTGGCAGATGTCCTCCGTCCGCCCGA 84425
||||| ||| ||||||| || | ||||||| ||||||||| ||| ||| || ||
Sbjct 24130 CGTCGCCCGGCAGGAAGACATTGACCGACTGGCTCTGGCAGATTTCCGGCGTGCGGTCGG 24071
Query 84426 CGGCCAGCCGCACGACCCAGCGCTGGTCGAGTTCCATCGCCGTCTTGTAGACGCGCTTCT 84485
||||||| | |||||||||||||| || || | || |||||||||| | | ||
Sbjct 24070 CGGCCAGTTCGATCACCCAGCGCTGGTCCAGCTCGAAGGCGGTCTTGTAGATG---TCCT 24014
Query 84486 TGTGGTCCAGGACCGCCGGGTCGACTTCGATGCCCAGGGCCTCGAAGAACTCGACCGAGA 84545
||| |||| || ||| | ||| || |
Sbjct 24013 TGTCGTCCTGG-----------------------------CTC-AGGAAGTCCAG----- 23989
Query 84546 AGTGCTGGATCGAGCCCTCGTTGGCGACGATGGTCTTCCAGACCTCATCGGTGTCGGCGC 84605
|||||| | ||||||||||| | | ||| | ||| ||| | ||||||| | ||
Sbjct 23988 -GTGCTGCACCGAGCCCTCGTGCTCCAGGATCGAGCCCCACACCGCGTCGGTGTTGTGGC 23930
Query 84606 CCAGGCTCGCCAGCCACGCGCGCAGCCAGCGGTTCTTGACCTGGAACGAACCCGAGAGGG 84665
|| | ||||| | ||| || ||||||||||| |||||| ||||| ||||
Sbjct 23929 CCTTCTCCTCCAGCAGCCTCTCCAGATAGGGGTTCTTGACCGCGAACGAGCCCGACAGGG 23870
Query 84666 TCTTGTGCAGGAAGGTGTTGGCGCGGTTGGGCTCGATCGACGGCGAAGCGCCGCCGCAGA 84725
||||||| | || ||||||| || | |||||||| || ||| | |||||||||||
Sbjct 23869 TCTTGTGGGTGTAGATGTTGGCCGGGATCGGCTCGATGCCCGCCGACGTGCCGCCGCAGA 23810
Query 84726 GGATCGACGAGGAGGCGTTGGGGGCCACCGCCAGCTTGTGGGCGAAGCGCTCGCCCGAGC 84785
|||||| |||||| | ||||| | ||||||||||| | ||||||||| ||||
Sbjct 23809 TGATCGAGATCGAGGCGGTCGGGGCGATGGCCAGCTTGTGCGAGAAGCGCTCCATGGAGC 23750
Query 84786 CT---TCCATGTCA--GGGGCCTCGCCGCG-CTCGGCGCCCAGGACCAGCGACGCCGCGT 84839
| || | | ||||| ||| | ||| ||||||| | ||| ||| ||
Sbjct 23749 CGCGGTCGGCGGCGTCGGGGCACGGCCCCTTCTCCTCGCCCAGCTTGATCGAGGCCTTGT 23690
Query 84840 CGGCCTTGCGGCGCATGTGGCGGAAGATGGTCTTATTG-AGCGTCTCGGCCGCCATGCTC 84898
|||||| |||||||| ||| ||| || | | || ||| ||| |||| ||||
Sbjct 23689 CGGCCTCGCGGCGCAGGTGCTTGAACATCCGCATGTTCCAGC-TCTTGGCCAGGGCGCTC 23631
Query 84899 TCGAACGGGATGTCGAGCGACTGGAGCAGCGAGTGGAAGCCCAGCAGGCCCAGGCCCACC 84958
|||||||| | || | ||| || | ||||||||||| ||||||||||||||||
Sbjct 23630 TCGAACGGCACGTTCTGGCTCTGCAGGAAGCTGTGGAAGCCCATCAGGCCCAGGCCCACC 23571
Query 84959 GAGCGCTCGCGCACGGCGCTGTAGGAGGCC--CGGTGCATCTCGTCCGGCGCGTTGTCGA 85016
||||||||||||| ||| ||||| |||| || || | |||| |||||| |||||
Sbjct 23570 GAGCGCTCGCGCATGGCCGCGTAGGCGGCCGTCGAGGC--CGCGTCGGGCGCGCGGTCGA 23513
Query 85017 TGAACACCTGGAGGCAGTTGTCCAGCATGCGCATCAGGTCTTCGATGAAGGTCGGGTGAT 85076
|||| |||| ||| |||||| || | ||||| | ||| |||||||| ||| || |
Sbjct 23512 TGAAGTCCTGCAGGACGTTGTCGAGGAAACGCATGACGTCCTCGATGAACAGCGGATGGT 23453
Query 85077 CCTTCCATTCGACCCACTTTTCGGCGTTGACGCTCGACAGGCAGCAGACGGCCGTGCGCA 85136
|| ||| || | | | ||||||||||| |||||||||||| ||||||||||||
Sbjct 23452 CCCGCCACTCCAGGAAGGTCTCGGCGTTGACCGACGACAGGCAGCACACGGCCGTGCGCT 23393
Query 85137 TCTTGCCGAACACGTCGCGGCCGGTGCCCAGCATGATCTC 85176
| ||| | ||| ||||||| ||||||||||||
Sbjct 23392 CGTGGCCCAGGTGGTCCGTGCCGGTGTGCAGCATGATCTC 23353
Score = 241 bits (266), Expect = 2e-58
Identities = 524/777 (67%), Gaps = 28/777 (4%)
Strand=Plus/Minus
Query 83282 GTCGGCGATGTAGCGGATGTACTTCTTGGTGTCCTCGGGCGTGACGCCGTCGACCTCGCC 83341
|||||||| | ||||||| || |||| |||| |||||||| | ||| | ||||||||
Sbjct 38388 GTCGGCGACGAAGCGGATATAGGCCTTGATGTCGTCGGGCGTCATGCCCTGCACCTCGCC 38329
Query 83342 CAGGGCGAAGGCTTGGTCGATGAAGGCGTCTTCCAGGTCGACCATCCGGCGGCCGGCGTC 83401
||||||| |||||||||| ||| |||||| |||||| | || | |||
Sbjct 38328 GGCCTCGAAGGCCAGGTCGATGAACTTGTCCTCCAGGCCGACCACGTGCTTGCAGCAGTC 38269
Query 83402 GTAGATGCGCTTCTTGGTCTCGTCGTTC--CAGGCGCGCGGGTGCTCCTTGATCAACTCG 83459
| |||| | || || || | || || |||| || |||||| | ||| ||
Sbjct 38268 GACGATGT-CGTC--GGCGACGGCCTTGGTCAC-CGCGTTCGTT-TCCTTGTTGAACGCG 38214
Query 83460 TGCAGGAGCTTGATCATGCTCTCGACGTGGTGGGTCTCGTCGCGGATCGACCACTCGACG 83519
|| |||||||||| || ||| ||| || |||||||||||||||||||| ||||
Sbjct 38213 TGGTACAGCTTGATCACGCCGTCGCAGTGCAGGCTCTCGTCGCGGATCGACCACGAGACG 38154
Query 83520 ATCGTGGTCATGCCCTTCATCAGGCCGCGCCGCTGGTAGTTCATCAGCAGGGCGAACGAG 83579
||| | ||||||||||||| | | ||| | |||||||||||| |||||||||
Sbjct 38153 ATCTGGCCCATGCCCTTCATCTTGTTGAAGCGCGGAAAGTTCATCAGCATCGCGAACGAG 38094
Query 83580 GAGAAAAGCTGCATGCCTTCGCCGAAGGCCGAGAACACGGCGATGTCGACGATCAGGTCG 83639
| ||| ||||||| || ||| |||| | ||||| ||| | | | | | ||||
Sbjct 38093 GCGAACAGCTGCAGCCCCTCGGTGAAGCCGCCGAACATGGCCAGGGTGCGGCAGATGTCG 38034
Query 83640 GCGATCGACGTGCCGCTCTCGCGCTCGAACATGTACTCGTGCTTTTCACGCATCGCCTGA 83699
||| | || | ||| | || |||||| || ||||| | ||| ||||
Sbjct 38033 GCGTTGGAGTCGACGCCGAAGGTCTG---CATGTAGTCATGCTTGGCCTTCATGGCCTCG 37977
Query 83700 TAGTCCAGGAAGGCGCGGAACTCGACCTCGGGCAGGCCCAGGGTGTCGATCAGGGTGGCG 83759
|| |||| ||| || ||||||| |||||||| ||| | ||| |||| ||| ||||
Sbjct 37976 TATTCCATGAACGCCGAGAACTCGGTCTCGGGCATGCCGATGGTCTCGAGCAGCAGGGCG 37917
Query 83760 TAGGCGNNNNNNNNNNNNNNNTC---GGCCGCCATGAACGAGGCCAGCATCATCCGCACC 83816
||||| || | ||| ||||||||||||||||||| |||
Sbjct 37916 TAGGCCGCGATATGGATCGTCTCCATGTTCGC---GAACGAGGCCAGCATCATCTTCACT 37860
Query 83817 TCCGGGTGCGG---GAAGCGCGGGCCGTACTTTTCGAAGTAGCCGCGCGCCACATCGACG 83873
|| ||| ||| ||| | | ||||| || | |||| | | ||| ||||||
Sbjct 37859 TC--GGT-CGGTTTGAACACCCGACCGTAGCGCTCCATGTAGTTGTCCTGCACCTCGACG 37803
Query 83874 TCGGCCTGGGTGAAGAAGCGGAAGAGTTGCGTAAGCTGGTTCTTCTCGCTGGGCTTGAGC 83933
|||| |||||||||||||||||||| ||||| ||| ||||| || || || |||
Sbjct 37802 TCGGACTGGGTGAAGAAGCGGAAGATCTGCGTCAGCAGGTTCCGTTCCTTGTCGTTCAGC 37743
Query 83934 TTCTCGTTCCAGTCCTGGATGTCGGTGTCCATCGGCGCCTCGTGGGGGAGCCAGTGGA-- 83991
|| || |||||||| || ||| | ||| |||| |||| | || | ||||||||
Sbjct 37742 TTGACGGCCCAGTCCTTGAGGTCCTCGCCCAGCGGCACCTCTTCCGGCATCCAGTGGACC 37683
Query 83992 -GCGATTGCATGATCCGGTAGGCGTCGTAGGCCCAGGGGTAGGCGAAGGGCTTGTAG 84047
|| ||| | ||| || ||||||||||||||| ||| ||| |||||||||
Sbjct 37682 TGCTGCTGCTTCTTCC---AGAAGTCGTAGGCCCAGGGATAGCGGAACGGCTTGTAG 37629
>seq10549
Length=25876
Score = 239 bits (264), Expect = 6e-58
Identities = 616/922 (67%), Gaps = 46/922 (5%)
Strand=Plus/Minus
Query 83146 CGCCCTTGCCGTACTCGGTCGAGCGCTGCTCGAAGAAGTTGGCGTGGGTCGGGGCGTT-C 83204
|| ||||| ||| ||||| | |||| |||||||||||||||||| ||| || |
Sbjct 7982 CGGCCTTGGAGTATTCGGTGGCGCGCGCCTCGAAGAAGTTGGCGTGC-TCGACGCCCGAC 7924
Query 83205 ATGATCCAGTCGAGCCAGTCGAAGGGGTTCTCCTTCTGGCCGTAGTTGGGCTTCATGCCC 83264
| | | |||||| | |||||||| | ||||||| | | || | |
Sbjct 7923 AGCAGGGCCTGCAGCCAGGGCAGCGGGTTCTCGGTGACGCCGTAGACCGCCGGCAGGTCG 7864
Query 83265 AGTTGCAGCCACCGGCGGTCGGCGATGTAGCGGATGTACTTCTTGGTGTCCTCGGGCGTG 83324
|| ||| || || | |||||||||| ||||||| || ||| |||||||||||||
Sbjct 7863 AGCTGCCGCAGACGCCAGTCGGCGATGAAGCGGATATAGGCTTTGATGTCCTCGGGCGTC 7804
Query 83325 ACGCCGTCGACCTCGCCCAGGGCGAAGGCTTGGTCGATGAAGGCGTCTTCCAGGTCGACC 83384
| ||| |||||| | ||| ||||||| |||||||||| ||| || ||| |||
Sbjct 7803 ATGCCCTCGACCGAGACCATCTCGAAGGCCAGGTCGATGAACCTGTCCTCGAGGCTCACC 7744
Query 83385 A---TCCGGCGGCCGGCGTCGTAGATGCGCTTCTTGGTCTCGTCGTTC--CAGGCGCGCG 83439
| || || || |||| || ||| | || || | | | || || |||||
Sbjct 7743 ACGGTCTTGCAGCAGGCGACG---ATGT-CGTC--GGCCACCGCCTTGGTCAC-CGCGCC 7691
Query 83440 GGTGCTCCTTGATCAACTCGTGCAGGAGCTTGATCATGCTCTCGACGTGGTGGGTCTCGT 83499
||| ||||||| | || | || ||||||||| |||| ||| ||| || ||||||
Sbjct 7690 GGT-CTCCTTGTTGAAGGCCTGGTAGAGCTTGATGATGCCTTCGCAGTGCAGGCTCTCGT 7632
Query 83500 CGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATCAGGCCGCGCCGCTGGTAGT 83559
|||| | ||||||| |||||| | ||||||||||||| | | ||| || |||
Sbjct 7631 CGCGCACCGACCACGACACGATCTGGCGCATGCCCTTCATCTTGTTGAAGCGCGGGAAGT 7572
Query 83560 TCATCAGCAGGGCGAACGAGGAGAAAAGCTGCATGCCTTCGCCGAAGGCCGAGAACACGG 83619
||||||||| |||||| || ||| ||||||| ||||||| |||| | ||||| ||
Sbjct 7571 TCATCAGCATGGCGAAGCTGGCGAACAGCTGCAGGCCTTCGGTGAAGCCGCCGAACATGG 7512
Query 83620 C---GATGTCGACGATCAGGTCGGCGATCGACGTGCCGCTCTCGCGCTCGAACATGTACT 83676
| | || | |||| ||||||| | ||| || | || || |||| | |
Sbjct 7511 CCAGGGTGCGGGCGAT---GTCGGCGTT---GGTGTCGACCCCGAACTTCTGCATGAAGT 7458
Query 83677 CGTGCTTTTCACGCATCGCCTGATAGTCCAGGAAGGCGCGGAACTCGACCTCGGGCAGGC 83736
||||||| || ||||||||||| || || ||||| |||| ||||||| ||| |||| ||
Sbjct 7457 CGTGCTTGTCGCGCATCGCCTGGTATTCGAGGAACGCGCCGAACTCGCTCTCCGGCATGC 7398
Query 83737 CCAGGGTGTCGATCAGGGTGGCGTAGGCGNNNNNNNNNNNNNNNTCGGCCGCCAT----- 83791
| | ||| |||| ||| ||||||||| ||| | ||||
Sbjct 7397 CGATGGTTTCGAGCAGCAGGGCGTAGGC------CGCGATATGGACGGTCTCCATGTTCG 7344
Query 83792 -GAACGAGGCCAGCATCATCCGCACCTCCGGGTGCGG---GAAGCGCGGGCCGTACTTTT 83847
|||||| | |||||||||| ||| || ||| ||| ||| | ||||||| |
Sbjct 7343 CGAACGACGACAGCATCATCTTCACTTC--GGT-CGGTTTGAACACCCGGCCGTAGCGCT 7287
Query 83848 CGAAGTAGCCGCGCGCCACATCGACGTCGGCCTGGGTGAAGAAGCGGAAGAGTTGCGTAA 83907
| | |||| | || || |||| ||| | |||||||||||||||||||| || || |
Sbjct 7286 CCATGTAGTTGTCGGCGACCTCGATGTCCGACTGGGTGAAGAAGCGGAAGATCTGGGTCA 7227
Query 83908 GCTGGTTCTTCTCGCTGGGCTTGAGCTT-CTCGTTCCAGTCCTGGATGTCGGTGTCC-AT 83965
|| | || |||| | | ||||| ||| |||||||| | ||| | ||| |
Sbjct 7226 GCAGATTGCGTTCGCCGTCCGACAGCTTGGTCG-CCCAGTCCTTGCAGTC-CTCTCCGAG 7169
Query 83966 CGGCGCCTCGTGGGGGAGCCAGTGGAGCGATTGCATGATCCGGTAGGCGTCGTAGGCCCA 84025
|||| |||| | || |||||||||| | ||| | | || |||||||||||
Sbjct 7168 CGGCACCTCTTCCGGCAGCCAGTGGACCTGCTGCTGGCGCTTCCAGAACTCGTAGGCCCA 7109
Query 84026 GGGGTAGGCGAAGGGCTTGTAG 84047
||| ||| ||| |||||||||
Sbjct 7108 GGGATAGCGGAACGGCTTGTAG 7087
>seq12126
Length=13531
Score = 102 bits (112), Expect = 1e-16
Identities = 124/167 (74%), Gaps = 4/167 (2%)
Strand=Plus/Plus
Query 139616 GTCGGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGC--CCCCATCGAGCCGGGGATG 139673
||| |||||||||||||| |||||||||||| || || ||||| |||||| |||
Sbjct 5465 GTCCGCGTTGCCCTTGCCACGCACGATGTAG--CTGCGCGTGCCCATGCTGCCGGGAATG 5522
Query 139674 ATGCCGAACTGGTCCTTCTGAGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCG 139733
||||| | || | ||| | || |||||||||||||| ||||| | | || |
Sbjct 5523 ATGCCCAGCTCGCCCTCGCGCGCGCTGACCGCGCCCTTGCGCGTCACCAGCAGTTCCTGG 5582
Query 139734 TCGAAGTGGAACTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGC 139780
|| ||| ||||||||| ||||||||||| ||||||||| ||||
Sbjct 5583 CCGTGGTGCGTCTCCTTCTGCACGTAGTTGTGATGGCAGTTCTCCGC 5629
>seq10139
Length=54691
Score = 102 bits (112), Expect = 1e-16
Identities = 85/104 (82%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 139559 CTTGGCGGCGGTGCGCGACATGGTCCGCCCCGCGCCGTGCGAGCACGAGCAGAACGAGTC 139618
|||||| || | || ||| | ||| ||||||||||||||||||| ||||||||||||
Sbjct 13760 CTTGGCCTCGTTCCGGCTCATCGCCCGTCCCGCGCCGTGCGAGCACGTGCAGAACGAGTC 13819
Query 139619 GGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCG 139662
| ||||||| ||||||||| ||| | |||||||| |||||||
Sbjct 13820 CGGGTTGCCCCGGCCGCGCACAATGAACGACTTGGCGCCCATCG 13863
>seq9576
Length=119252
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 161221 AGAAGCTCTCGATCGGCTGCTTGAGGAAGCGCGCGGCGTCGTAGAGCTTCGAGGACGAGA 161280
||||| | |||| ||| ||| ||||| || | | ||| || ||||| | ||
Sbjct 110842 AGAAGAACCCGATGGGCGTCTTCAGGAACATGGCCGTGGCGTGCAGTTTCGACGCGCTGA 110783
Query 161281 TGCGGTTGTCGCCGCGCTCGTACTTCTGGACCTGCTGGAACGTGATGCCCAGGGCGTTGG 161340
| |||||| |||||| |||||||||||| |||||||||||||| | |||||||||| ||
Sbjct 110782 TCCGGTTGGCGCCGCCCTCGTACTTCTGCACCTGCTGGAACGTCAGCCCCAGGGCGTCGG 110723
Query 161341 CCAGATCGCCTTGCGAATAGCCGGCGGCCTTGCGGGTGTTGCGCAGCTTCTGACCGACGT 161400
| || | ||||||||||| ||||||| ||||||| | || ||||
Sbjct 110722 CGAGGGCTTGCTGCGAATAGCCAAGATCCTTGCGCCGCATGCGCAGGCGACGGCCCACGT 110663
Query 161401 ACTTGTCGACCGGGTGCGGGGTCTTGTCTTCG 161432
||||||| || | || |||||||||||
Sbjct 110662 GGATGTCGACGGGATCGGGACTCTTGTCTTCG 110631
>seq7411
Length=194455
Score = 96.9 bits (106), Expect = 5e-15
Identities = 117/157 (75%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 161230 CGATCGGCTGCTTGAGGAAGCGCGCGGCGTCGTAGAGCTTCGAGGACGAGATGCGGTTGT 161289
|||||||| ||| |||| || |||| ||||||||||| || | |||||| |||
Sbjct 57353 CGATCGGCACCTTCAGGACGCCGGCGGTCTCGTAGAGCTTGGAAGCGCTGATGCGATTGG 57412
Query 161290 CGCCGCGCTCGTACTTCTGGACCTGCTGGAACGTGATGCCCAGGGCGTTGGCCAGAT-CG 161348
||||||||||||||||||| ||||||||||| |||| ||| || |||||| |
Sbjct 57413 CGCCGCGCTCGTACTTCTGCACCTGCTGGAAAGTGAGCTTCAGTCCGGCGGCCAGCTGTT 57472
Query 161349 CCTTGCGAATAGCCGGCGGCCTTGCGGGTGTTGCGCA 161385
||| || | |||||| |||||||| | ||||||
Sbjct 57473 CCTGGCTGA-CGCCGGCCACCTTGCGGCGGGTGCGCA 57508
>seq7053
Length=464797
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 90211 AGGTGGATGATCGGGTTGTCCTTGGCCTGACGGTGGATTTCCGACAGGAAGAAGTCCGGG 90270
|| |||||||| || |||||||||||||| || |||||||||||||| | | | |||||
Sbjct 49747 AGATGGATGATGGGATTGTCCTTGGCCTGCCGATGGATTTCCGACAGCAGGTAATCCGGC 49806
Query 90271 TCGTTCGCCAGCAGGCCGGCGGCGTCCTCGACCGGCGGAAGCTGACCAGGATCGCCCATG 90330
|| | | || | | | || || || |||||||| ||||| || |||||||| |
Sbjct 49807 TCCTGCTCCGTGAAGAAGCCGCCGCCCGAAACCGGCGGCAGCTGTCCGGGATCGCCGAGC 49866
Query 90331 GCGAAGATCGGCACGCCGAATTCCATCAGGTC 90362
||| ||| ||| |||||| |||||| ||
Sbjct 49867 ACGAGGATGGGCGTGCCGAAGCTCATCAGATC 49898
>seq9875
Length=154362
Score = 84.2 bits (92), Expect = 3e-11
Identities = 73/91 (80%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 161253 GCGGCGTCGTAGAGCTTCGAGGACGAGATGCGGTTGTCGCCGCGCTCGTACTTCTGGACC 161312
||||||||||| || || || |||||| ||| |||| || ||||| ||||||| |
Sbjct 33132 GCGGCGTCGTACAGTTTACTGGCGCTGATGCGATTGGCGCCCCGTTCGTATTTCTGGATC 33191
Query 161313 TGCTGGAACGTGATGCCCAGGGCGTTGGCCA 161343
|||||||| |||||||| ||||||| |||||
Sbjct 33192 TGCTGGAAGGTGATGCCAAGGGCGTCGGCCA 33222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 715641264115200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |