Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_019709.1 Length=41567 Score E Sequences producing significant alignments: (Bits) Value seq7041 116 1e-21 >seq7041 Length=191181 Score = 116 bits (128), Expect = 1e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 40463 CTGACATTCTGCGTTCTGGTGCTGAAGAATGGCTTTACGGTCACCGGGGAAAGCGCCTGC 40522 ||||| |||||||||| || ||| |||| || || ||||| || || || ||||||||| Sbjct 27054 CTGACGGTCTGCGTTCTCGTCCTGCAGAACGGTTTCACGGTGACTGGCGAGAGCGCCTGC 26995 Query 40523 GCCAGCCCAGAGAACTTCGATGAAGAAATCGGGCGCAAGATTGCTCGCCAGAATGCTGTA 40582 |||||||| || |||||||||| ||||||||| | || || ||| ||||||| Sbjct 26994 GCCAGCCCGGAAAACTTCGATGCCAGGATCGGGCGCGATATCGCCCGCGCGAATGCTCGC 26935 Query 40583 AACAAAATCTGGATGCTCGAAGGTTACTTGCT 40614 ||||| |||||| ||| || || ||| |||| Sbjct 26934 AACAAGATCTGGCAGCTTGAGGGATACCTGCT 26903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132869035361982