Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_019713.1
Length=78751
Score E
Sequences producing significant alignments: (Bits) Value
seq9676 152 3e-32
>seq9676
Length=343241
Score = 152 bits (168), Expect = 3e-32
Identities = 382/572 (67%), Gaps = 14/572 (2%)
Strand=Plus/Plus
Query 52899 TAGTAACAACCCGCAAGAGCTTCTGGAAAGCAGCTGTAGCCGAACTGCTTGGGTACATTC 52958
|||| || ||||| || ||||| | ||| | ||| | || ||| ||||||| || | |
Sbjct 84229 TAGTCACCACCCGTAAAAGCTTTTATAAATCGGCTATTGCTGAAATGCTTGGCTATTTGC 84288
Query 52959 GTGGATACAGCAGTGCCGAAGATTTCCGAAAGCTGGGAACCACCACTTGGGACGCTAACG 53018
|||| ||| | ||| | |||||| ||||| || |||||||||||||| || || |
Sbjct 84289 GTGGTTACGATAATGCGGCAGATTTTAGAAAGGCAGGCACCACCACTTGGGATGCCAATG 84348
Query 53019 CCAACAAGAATGAAGCTTGGCTTAATAACCCGTACCGCGTGGGCAATGACCACATGGGGC 53078
||||| | ||| ||| ||| | || || ||||| ||| | || || || |||
Sbjct 84349 CCAACGACAATCAAGACTGGTTAGCCAATCCATACCGTAAGGGGCAGGATGAC-TGTGGC 84407
Query 53079 -GTGTTTACGGT---GT-GC-AGGGACGATCTTGGGCTAAGCCGGATGGCGGTACTGTGG 53132
| | |||||| || || || || || | ||||| |||||||| | | | |
Sbjct 84408 TTTATCTACGGTAAAGTCGCTAGAAACTTTC-----CCAAGCCTGATGGCGGCAGTATTG 84462
Query 53133 ACCAGCTCAAGAAGATTGTGGATAATCTTACTAACGGTATCGACGACCGTGGGGAGATCC 53192
| || || || ||| | ||| | |||| | || || || | | || || || |
Sbjct 84463 ATTTACTGAAAAATATTATTGATGACCTTAGCCAAGGCATTGATAATAGAGGTGAAATTC 84522
Query 53193 TGAACTTCTACAACCCGGGCGAGTTCCACATGGGATGCCTACGCCCGTGCATGTACAGCC 53252
| | || ||| |||| |||| || || ||||| || || | || || ||||| ||||
Sbjct 84523 TCACGTTTTACCACCCCGGCGTATTTCATATGGGCTGTTTAAGGCCTTGTATGTATAGCC 84582
Query 53253 ACCACTTCTCACTGCTAGGAGACACCCTGTATCTCAACAGCACACAACGCTCTTGTGATG 53312
| || |||||| | | || || || || ||| | || || ||||| | ||||||||
Sbjct 84583 ATCATTTCTCATTATTGGGCGATACGCTATATTTAAATAGTACACAGAGAAGTTGTGATG 84642
Query 53313 TACCTTTGGGTCTGAACTTCAACATGGTTCAGGTGTACGTGTTCCTAGCGATCATGGCTC 53372
| || | || || |||||||| ||||| || || || | || |||| | |||| |
Sbjct 84643 TGCCGCTTGGCCTCAACTTCAATATGGTGCAAGTCTATTTCTTGTTAGCTTTAGTGGCGC 84702
Query 53373 AAATCACCGGGCACAAGA-TGGGCACCGCGCACCACAAGATCGTGAACGCTCATATCTAC 53431
|||||| |||||| || | ||||| || || || | || || || ||||| ||
Sbjct 84703 AAATCA-CGGGCAAAAAAGCGGGCAAAGCTTTTCATAAACTGGTCAATGCGCATATTTAT 84761
Query 53432 GAAGACCAGATAGATCTCATGCGCGACGTACA 53463
|| || ||| ||| || ||||| || || ||
Sbjct 84762 GAGGATCAGCTAGCACTGATGCGTGATGTGCA 84793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 251832172363688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |