Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_019917.1
Length=62952
Score E
Sequences producing significant alignments: (Bits) Value
seq9587 461 3e-125
seq10635 233 8e-57
seq11465 122 4e-23
seq2892 98.7 4e-16
seq9795 91.5 6e-14
seq13715 89.7 2e-13
seq7835 86.0 3e-12
seq6714 84.2 9e-12
seq8237 82.4 3e-11
>seq9587
Length=50143
Score = 461 bits (510), Expect = 3e-125
Identities = 818/1169 (70%), Gaps = 43/1169 (4%)
Strand=Plus/Minus
Query 24375 TGCCCTTCCGCCCGAACCGCGCGCAACGCCGGCTCCTGCGACGCCTCTGGCACCGCAACG 24434
|||||||||| || || |||||||| || || | | || |||||||||||||||
Sbjct 14416 TGCCCTTCCGGCCCAATCGCGCGCAGAAGCGTTTCATCAGCCGGCTCTGGCACCGCAACA 14357
Query 24435 TCATCCTGAAGGCCCGCCAGCTCGGCTTTACCACCCTGATCTGCATCATCTGGCTCGACC 24494
||||||||||||| || ||||| ||||| |||||||||||| |||| | ||||| ||||
Sbjct 14356 TCATCCTGAAGGCGCGGCAGCTGGGCTTCACCACCCTGATCGCCATCCTGTGGCTGGACC 14297
Query 24495 ACGCGCTGTTCAACGCGAA-CAGCCGGTGCGGCATCATCGCCCAGAACCGCGAGACGGCC 24553
| ||||||||||| ||| | |||| | |||||||||||||| || | ||||| | |||
Sbjct 14296 ATGCGCTGTTCAATGCGGATCAGC-GCTGCGGCATCATCGCGCACGATCGCGATTCAGCC 14238
Query 24554 GAGGCGATCTTTCGGGACAAGGTGAAGTTCGCCTACGACAACCTGCCCGAGGCGCTGCGC 24613
||||| ||||| |||||||||||||||| ||||||||| ||||||||||||| | | ||
Sbjct 14237 GAGGCCATCTTCCGGGACAAGGTGAAGTACGCCTACGAGAACCTGCCCGAGGAGATTCGA 14178
Query 24614 GACGCGATGCCGCTCGCCAACTGCACG-CAGTCC----GAGATGCTGTTCGGGCACAACA 24668
||| || | | | || || || |||| | ||| ||||||||| |||||||
Sbjct 14177 GAC-CGCTTC----CCCCTGGAGCGCGACAGTGCCGTGGAGCTGCTGTTCGCCCACAACA 14123
Query 24669 ACAGCAGCATCCGCGTCGCGACGTCGGTGCGCGGCGGCACGATCCACCGCCTGCACGTGT 24728
|||||||| | ||||| || ||||| |||| ||||||||||| || || ||||| |
Sbjct 14122 ACAGCAGCGTGCGCGTGGCTACGTCCATGCGGTCGGGCACGATCCATCGGCTCCACGTCT 14063
Query 24729 CCGAGTTCGGGAAGATCTGTGC-CGAGGCGCCGCTGAAGGCCAAGGAGATCGTGACCGGC 24787
|||| | || ||||||| || || | |||| |||||||||||| | ||||||||
Sbjct 14062 CCGAACTGGGCAAGATCTCGGCACGCTTC-CCGCATAAGGCCAAGGAGGTGATGACCGGC 14004
Query 24788 TCGATCCCGGCCGTGCCGAAGTCGGGCATTCTGGTCATCGAGTCGACGGCCGAGGGCCGC 24847
|| || ||||||||||| | | ||||| ||||| |||||| |||||||||||| |
Sbjct 14003 TCCATTCCGGCCGTGCCCACCACCGGCATCCTGGTAATCGAGAGCACGGCCGAGGGCGCC 13944
Query 24848 GAGGGCGAGTTCTACGAGATCACGATGCGCGCCGAGGCGACCGCGCAGCAGGGCCGA-CC 24906
| |||||||||||| | | | ||| |||||||| | || | || | | |
Sbjct 13943 AACGGCGAGTTCTACCACCTGTCCCAGCGGGCCGAGGC-CCTGCACTACACGCACAAGAA 13885
Query 24907 GCTCACGCCGCGCGACTACCGATTCCACTTCTATCCGTGGTGGCAGGCGCCCGAGTACCG 24966
||| | ||||||||||| || ||||||||||| |||||||||||| |||| | |||||
Sbjct 13884 GCTGAGCCCGCGCGACTATCGCTTCCACTTCTACGCGTGGTGGCAGGAGCCCAACTACCG 13825
Query 24967 CATGGACGCGGCCGGCGTC---GTCATCACCGAGAAGGACCGGCAATACTTCGAGACGAT 25023
||||||||||| | ||| ||| |||| || || | || ||||| | |
Sbjct 13824 CATGGACGCGGGCCTGGTCCATGTCGCGCGCGAGCAGCAC---GACTATTTCGACCAGGT 13768
Query 25024 CGAG---GCGAAGCACGGCATCACGATCGATGCCGAGCAGCGCGCTTGGTACGTCGCAAC 25080
|||| | || ||| | ||| |||||| || ||||| || ||||| || || ||
Sbjct 13767 CGAGGTCGAGATGCAGTG---CACCATCGATCTGGAACAGCGGGCCTGGTATGTGGCCAC 13711
Query 25081 CCGCGACGCCGACTTCTCCGGCAACGAGGAACGTATGTGGCAGGAATACCCGTCGACGCC 25140
|| || || |||||| |||| || || ||||||||||| ||||| || |||||
Sbjct 13710 CCAGGAGGCTGACTTCCCCGGTGCGCCTGAGCGCATGTGGCAGGAGTACCCCTCCACGCC 13651
Query 25141 CGACGAACCGTTCAAGGTTTCGACCGAGGGCACGTACTACGCCCAGCAGCTCGCCGCG-G 25199
| ||| | ||| || || | || |||| |||||||||| || | | |||
Sbjct 13650 GGCCGAGGCATTCCAGCAGTCCAGCGCGGGCCGGTACTACGCCAAGGCCATGGTTGCGCT 13591
Query 25200 CGCGCAAGCAGGGGCGCATCAAGCCGTCCCTGCCTGTCCTGTTCAACGTGCCGTGCTTCA 25259
| || |||| || |||||| | || |||| | ||| | ||||| || ||
Sbjct 13590 CACG-AAGCGCGGCGGCATCA---CCTCGGTGCCCGAGCTG---GATCTGCCGGTCTACA 13538
Query 25260 CCTTCTGGGACATCGGCAACAGCGACGGCACGGCAATCTGGGTGCTCCAG-CGCGTCGAG 25318
| |||||||| ||||| | ||||| ||||| |||||| | | ||| | | || |
Sbjct 13537 CATTCTGGGATATCGGGCGCGCGGACGGGACGGCCATCTGGTTCATGCAGTCCCTGCGCG 13478
Query 25319 CACGAGTGGCGCGCCATCCGGTTCAAGGAAG-GCTGGGGCGAGCCGTACAGCTACTTCGT 25377
|||| ||| |||| | | | || | || | | || | | | || ||| |||
Sbjct 13477 -GCGAGGACCGCTTCATCAACTACTACGAGGAGCACGAGGAAGACCTGCGGC-ACTACGT 13420
Query 25378 GAAGTGGCTCCAGGGGCTCGGCCTCGTGTGGGACACGATGTTCCTGCCGCACGACGCGGA 25437
| || ||||| |||||| ||||| | | | ||||||||||| |||||| |
Sbjct 13419 GCGCCACCTGCAGGGCCTCGGCTACGTGTTCGGCGGGCACTTCCTGCCGCATGACGCGAA 13360
Query 25438 CCACGTGCGTCAGGGGCAGACGACGAACAAAAGCCCGAAGCAGATGCTCGAGGAGCTGAT 25497
||| ||| | | | | || ||| | | | |||||| ||| ||| ||||||
Sbjct 13359 TCACAAGCGCCTGAGCGA---TACCAACCGATCCACAAAGCAGCAGCTGCAGGCGCTGAT 13303
Query 25498 GCCGGGCGTGCGGTTCGAGATCGTGCCGC 25526
||||||| ||| || | | | || ||||
Sbjct 13302 GCCGGGCCAGCGCTTTGTGGTGGTTCCGC 13274
>seq10635
Length=172665
Score = 233 bits (258), Expect = 8e-57
Identities = 355/499 (71%), Gaps = 5/499 (1%)
Strand=Plus/Plus
Query 54148 GCAGAAGATGCGCGCCGCGTTC-AGCCGCTGGATTTGGACGGACACGAAGCGCGCCGACC 54206
||||||||| |||||||| || | |||||| ||||| ||| | | ||| |||| |
Sbjct 170399 GCAGAAGATCAAGACCGCGTTCCAGAC-CTGGATCTGGACCGACCCCGATCGCACCGATC 170457
Query 54207 GGCTCGTCAACTACTACAACGAGAACTTC-AACAACATCGCCCCGCGCCAGTTCGACGGC 54265
|||| | || || || |||| |||||||||| |||||| |||||||||
Sbjct 170458 GGCTGGGGCGGGTGTATAAAGACCCCTTCTAACAACATCGTGCCGCGCGCCTTCGACGGC 170517
Query 54266 TCGCACCTGACGCTGCCGGGCGTGTCGCTGCG-CTTCGACCTGCGCGAGAACCAGAAGCG 54324
||||| |||| ||||||||||| || | ||| ||||| || ||| ||||||||||
Sbjct 170518 TCGCATCTGAAGCTGCCGGGCGCATC-CGGCGCCTTCGTGCTCTACGATCACCAGAAGCG 170576
Query 54325 CGCCATCTGGCGCGGCATTCAGGAAGGCGATATGTACCTCGCGCACGCTGTCGGCGCGGG 54384
|| |||||||||| ||| | |||| | |||||||| ||||| |||||||| ||
Sbjct 170577 CGGCATCTGGCGCATCATCGCCGCGGGCGCGACCTACCTCGCCCACGCCGTCGGCGCCGG 170636
Query 54385 CAAGACGTTCACGATGATCGCGACCGGCATGGAGGAGCGCCGGCTGGGCCTGTCCAACAA 54444
||| || | |||||| || || ||||||| |||||||||| |||||| | |||
Sbjct 170637 CAAAACCATGACGATGGCGGCCGCCATCATGGAGCAGCGCCGGCTTGGCCTGATCGCCAA 170696
Query 54445 GCCGATGTATGCGGTGCCGAACCACATGCTCGCGCAGTTCGCGCGCGAGTTCCTTGAGCT 54504
| ||||| || |||||| || || |||||| ||||||||| || || | |||
Sbjct 170697 GGCGATGCTTGTGGTGCCCGGTCATTGCCTGGCGCAGGCCGCGCGCGAATTTCTGGCGCT 170756
Query 54505 GTACCCGGCCGCGAACATCATGGTCGCGGACGAGCAGAATTTCCATACGCACAACCGCCG 54564
|| ||| ||| |||| | ||||| |||||| || ||| | | |||| || |
Sbjct 170757 CTATCCGAACGCCCGCATCCTCGTCGCCGACGAGACCAACTTCAGCAAGGACAAGCGGCA 170816
Query 54565 CCGGTTCGTCGCGCAGGCCGCGCTCAATAACCCGGACGCGATCATCATCACGCACTCGGC 54624
|| ||| | ||| ||| ||| | | | |||||||||||||||||||||||||||
Sbjct 170817 GCGCTTCTTATCGCGGGCGGCGACCGCGACCTGGGACGCGATCATCATCACGCACTCGGC 170876
Query 54625 GTTCGGCCGCATCGGCATG 54643
||| || ||||||| ||
Sbjct 170877 CTTCCGCTTCATCGGCGTG 170895
Score = 161 bits (178), Expect = 4e-35
Identities = 887/1377 (64%), Gaps = 69/1377 (5%)
Strand=Plus/Plus
Query 54863 CACGAGTTCCGCAAACTCGACTTCGCGACGCAGCAGGGCAACA-TCAAGGGCATCGACCC 54921
|| || |||||||| || |||||| ||| | | | | || | |||||| |||| ||
Sbjct 171109 CAGGAATTCCGCAAGCTGTCCTTCGCCACGAAT-ATGTCGACGCTGAAGGGCGTCGATCC 171167
Query 54922 GGCCGGCTCGCAACGCGCGATGGACCTGTTCATGAAGGCGCAGTACCTGCGCTCGAAGAA 54981
||||||||| || || |||||| | ||||| | | | | | |||||||
Sbjct 171168 CAACGGCTCGCAGCGTGCCTGGGACCTCTATGTGAAGTCCCGATTCATCGAAACGAAGAA 171227
Query 54982 GCCGGGCCGCGCGCTCGTCGCCGCGTCGGGCACGCCGATCACGAACACGATGGGCGAGCT 55041
|| |||||||||||||| ||||| |||||||||||||| |||||| | |||||| |
Sbjct 171228 TCCCGGCCGCGCGCTCGTGCTGGCGTCTGGCACGCCGATCACCAACACGCTCGGCGAGAT 171287
Query 55042 GTTCACGGTGCAACGCT---TCTTCCAGCCCGAGCAGATGGCCGAGGACGGTCTGGACAC 55098
|| ||||||| |||| || | | ||| | | |||| || || ||
Sbjct 171288 GTATTCGGTGCAGCGCTATCTCGGCTACGCCGCCC---TCCGCGAGCGGGGCTTGCACGA 171344
Query 55099 CTTCGACGCGTGGGCG--AACCAGTACGGCGACGTCGTGGCGGGCTTCGAGCAGAACGCG 55156
|||||||| ||||| |||| | |||||||||| | | | |||||| | |
Sbjct 171345 GTTCGACGCCTGGGCCTCAACC--TTCGGCGACGTCTCGACCGAGCTCGAGCTTCAGCCC 171402
Query 55157 GCGGGCGGCTATGAAGTCG-TCAGCCGCTTCGCGAAGTTCCAGAACGTGCCGGAGCTGAT 55215
| ||| | || ||| || ||| |||||||||| ||| || || || ||||||||
Sbjct 171403 TCCGGCAGATAC-AAGCCGGTCACGCGCTTCGCGACCTTCGTCAATGTCCCCGAGCTGAT 171461
Query 55216 GCGCCGCGTGC-GCTCGTTCATGGACATCCTGACGAGCTCGCAGCTCTCGCAG-TACGTC 55273
|||| || | | || ||| ||| | | | | | | || ||| | |||||
Sbjct 171462 -CGCCATGTTCCGGTCCTTCGCCGACGTGGTCATGGCGGAGGACCTG-CGCCGATACGTG 171519
Query 55274 GACCGCCCGGCGATCGATGGCGGCGGCCGTCAGGTCATGGTCACGCCGGAGCCGTT---C 55330
| ||||||||| |||| || ||| ||||| ||| || ||||| |
Sbjct 171520 AAGATTCCGGCGATCTCGACCGGCAAGCGCCAGATCATG---ACGGCGAAGCCGACGGCC 171576
Query 55331 GGCTATAAGGCATACCAGAAGGCGCTCGAACAGCGCATCACCGCGATCCGTAACCGCAAG 55390
| || ||| |||||| |||||| |||||||| |||||| | ||| |
Sbjct 171577 GCCTTCAAGCGTTACCAGGTCCAGCTCGATGCGCGCATCAAGGCGATCGAGATGCGCGAC 171636
Query 55391 GGGCCGCCCTCGAAGGGGCAGGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCC 55450
| ||||| | || | |||||| | || ||| ||| | |||||||| ||
Sbjct 171637 CGTCCGCCGGAGCCAGGCGACGACATCCTGCTCTCCGTCATCACCGACGGCCGCCATGCC 171696
Query 55451 GCGATCGACATGCGCTTCGTCGACCCG-ACCGCGCCGAGCGACCCGAACAGCAAGCTGAA 55509
||||||||| | ||| | ||||| ||| || | ||| ||| || ||| |||||||||
Sbjct 171697 GCGATCGACCTTCGCCTTGTCGATCCGGACAATGACGA-CGAGGCGGACAACAAGCTGAA 171755
Query 55510 CCAGATGCTCGACGCCGTGATCGCCGACTATCACGCGG----CGTCCGACTTCGAGTATT 55565
|| |||| ||| || || ||| | ||| |||| || ||||| || |||
Sbjct 171756 CCTGATGATCG--GCAATG--CGCTGCGCATCTGGCGGGAAACGGCCGACAACGCCTATG 171811
Query 55566 CGA---CGAACGGCAAGGTCGACCCGATCAAGGGCGCGTCGCACATCATCTTTACCGACA 55622
| | |||||||| | | | | ||||| |||| || ||||| ||||
Sbjct 171812 TGCGTGCCGACGGCAAGCCCTATGAGCTGCCCGGCGCCGCGCAGATGATCTTCTCCGATC 171871
Query 55623 TCGGGCTCGGCGAGCAGTCGGCGAAGAACCGCGGCTTT--GACATGAAGGCGTGGATC-G 55679
||||| | | || || ||||| ||||||||| | | | | || |||||| |
Sbjct 171872 TCGGGACCATTT--CCGT-GGAGAAGAGCCGCGGCTTCTCGGCCT-ATCGC-TGGATCAG 171926
Query 55680 AAAAGCGTCTGGTCGAGGGCGGCGTGCCGCGCGAGC-AGATCGCGTTCATGCGCGACAAC 55738
| | | ||| || ||||||||| ||| | ||||||| ||||||| ||| ||
Sbjct 171927 GGACGAG-CTGATCCGCATGGGCGTGCCG-GCGTCCGAGATCGCCTTCATGCAGGACTAC 171984
Query 55739 AAGGAGCACGCCAAGAAGGAGCGCCTGTTCGCGGACATGCGCGAGGGCAAAAAGCGCATC 55798
||| || | |||| |||||||||||| ||| |||||| ||||| ||| ||
Sbjct 171985 AAGAAGTCGGAGGCGAAGCAGCGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTTCGCTTC 172044
Query 55799 CTGATCGGCGGCAAGGA---CATGGAAACCGGCGTGAACGTGCAGAAGCGCCTCTACAGC 55855
||||||||| | || |||| |||||||| |||| |||| ||||| | ||
Sbjct 172045 CTGATCGGCTCCTCCGATACGATGGGCACCGGCGTCAACGCGCAGCTCCGCCT-GAAGGC 172103
Query 55856 G-AGGAGCATCTGGACGCGCCGTGGTTCCCGGCGTCCGTCGAGCAGCGCGAGGGGCGCAT 55914
| | | || || |||| ||| ||| |||| || ||| |||||||||||||| ||
Sbjct 172104 GCTGCATCACCTCGACGTGCCCTGGCTCCCCTCGCAGATCGCCCAGCGCGAGGGGCGGAT 172163
Query 55915 CATCCGCCAGGGCAACCAGAACAAGCAGGTGCGCATCCGCGCGTGGGCGA-CGAAGGGCA 55973
| ||||||||||| ||| || | | | || ||| | |||| ||||||
Sbjct 172164 CGAGCGCCAGGGCAATCAGCACGACGTCATCGACGTCTTCGCCTATGCGACCGAAGGCTC 172223
Query 55974 GCTACGACAGCACGATGTGGGGGATGAACGCCCGCAAGGCGCGGTTCATCGAACAGGCCC 56033
|| |||| |||||||||| || || | |||||||| || ||||||| || |
Sbjct 172224 ACT-CGACGCCACGATGTGGCAGAACAATGAGCGCAAGGCACGCTTCATCGCGGCCGCGC 172282
Query 56034 TCAACGGCGACGACAGCG-TGCGCTCGCTCGAGGACGTGTCTGAAGCGTCGGC------G 56086
| |||||| || || | ||| || |||||| | |||| ||| |
Sbjct 172283 TTTCGGGCGAC-ACCTCGATCCGCCGTCTGGAGGACCTCGGCGAAGGCCAGGCCAACCAG 172341
Query 56087 TTCGACATGGCCGCCGCGCTGGCGTCGGGCGACGAGCGCTATCTGAAG---ATGGCCGGC 56143
|||| ||||| ||| | || ||||||||| |||| ||||| | | |||||
Sbjct 172342 TTCGCGATGGCGAAGGCGATCGCATCGGGCGACCAGCG---TCTGATGCTCAAAGCCGGG 172398
Query 56144 CTGAAGGCCGACGTCGAGCGCCTGGAGCGTCTGAGCTACGCGCACCACGACGACCAG 56200
|| | |||||| ||| ||| || || || || || |||||| |||||| |||
Sbjct 172399 CTCGAAGCCGACATCGCGCGGCTCGAACGGCTCCGCGCCGCGCATATCGACGATCAG 172455
>seq11465
Length=2819
Score = 122 bits (134), Expect = 4e-23
Identities = 230/328 (70%), Gaps = 29/328 (9%)
Strand=Plus/Minus
Query 24431 AACGTCATCCTGAAGGCCCGCCAGCTCGGCTTTACCACCCTGATCTGCATCATCTGGCTC 24490
|| || ||||| || || ||||||| |||||| |||||| | ||| | || ||||
Sbjct 2715 AATGTGATCCTCAAAGCGCGCCAGCGCGGCTTCACCACCTTCATCCAGCTGTTCATGCTC 2656
Query 24491 GACCAC-GCGCTGTTCAACGCGAACAGCCGGTGCGGCATCATCGCCCAGAACCGCGAGAC 24549
||| | ||| | |||||||| |||| ||||||||| | ||| | |
Sbjct 2655 GACGCCTGCG-TCTTCAACGC------------CGGCTCCATCGCCCACA--CGCT-GTC 2612
Query 24550 GGCCG---AGGCGATCTTTCGGGACAAGGTGAAGTTCGCCTACGACAACCTGCCCGAGGC 24606
|| || ||| |||||| || ||||||||| || |||| |||||||||||||| |
Sbjct 2611 GGACGCGCAGGTGATCTTCCGCGACAAGGTGCGTTTTCCCTATGACAACCTGCCCGACG- 2553
Query 24607 GCTGCGCGACGC-GATGCCGCTCGCCAACTGCA-CGC-AGTCCGAGATGCTGTTCGGGCA 24663
|| | |||| | | || ||| ||| || ||| ||| ||| ||||| ||||
Sbjct 2552 GCATCAAGACGGTGGTCCCCATCGTGAACGACAACGCCAGT--GAGTTGCTGCTCGG--- 2498
Query 24664 CAACAACAGCAGCATCCGCGTCGCGACGTCGGTGCGCGGCGGCACGATCCACCGCCTGCA 24723
||||||| | ||||||||||| |||| ||| ||||| ||||||| | || ||||||
Sbjct 2497 CAACAACTCCGGCATCCGCGTCTCGACCTCGCTGCGCTCCGGCACGCTGCAGTACCTGCA 2438
Query 24724 CGTGTCCGAGTTCGGGAAGATCTGTGCC 24751
||| ||||| | ||| |||||||| |||
Sbjct 2437 CGTCTCCGAATACGGCAAGATCTGCGCC 2410
>seq2892
Length=791
Score = 98.7 bits (108), Expect = 4e-16
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 31096 GAAGGTCGCAACAACCCGATCTTCAAGGGCGGCCTCGGCATGATCAACAACGTGGTGCTG 31155
||||| ||| ||||||||||||| ||||| | ||| | |||| |||| | |||
Sbjct 445 GAAGGCGCCAAGAACCCGATCTTCACGGGCGCGATGGGCCTCTACAACGACGTCATCCTG 386
Query 31156 CACAAGCACCGCAACGTGATCCGCTTCAACGACTACGGCGCAGGCGCCAACGTC 31209
|||||||||||||||||||| |||||| ||||||||| || ||||| ||| ||
Sbjct 385 CACAAGCACCGCAACGTGATTCGCTTCGGCGACTACGGTGCCGGCGCAAACCTC 332
>seq9795
Length=220374
Score = 91.5 bits (100), Expect = 6e-14
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 24670 CAGCAGCATCCGCGTCGCGACGTCGGTGCGCGGCGGCACGATCCACCGCCTGCACGTGTC 24729
||||||||| ||||| || || || |||| ||||| || ||||| ||||| |||||
Sbjct 185633 CAGCAGCATTCGCGTGGCTACATCTATGCGTGGCGGTACTTATCACCGTCTGCATGTGTC 185574
Query 24730 CGAGTTCGGGAAGATCTGTGCCGAGGCGCCGCTGAAGGCCAAGGAGATCGTGACCGGCTC 24789
|||||||||||||| || || || || |||||||| || | | ||||| ||
Sbjct 185573 TGAGTTCGGGAAGATATGCGCTAAGAACCCAGCAAAGGCCAAAGAAGTTATCACCGGTTC 185514
Query 24790 GATCCCGGCCGTGCCGAAGTCGGGCATTCTGGTCATCGAGTCGACGGCCGAGGGCCGCGA 24849
|| ||| | ||||| | ||| ||||| | |||| ||| || ||||| || | ||
Sbjct 185513 TATTCCGTCTGTGCCAATGTCAGGCATATTAATCATTGAGAGTACAGCCGAAGGGCAAGA 185454
Query 24850 GGGCG 24854
||||
Sbjct 185453 CGGCG 185449
>seq13715
Length=7744
Score = 89.7 bits (98), Expect = 2e-13
Identities = 119/159 (75%), Gaps = 10/159 (6%)
Strand=Plus/Plus
Query 50090 GGCACGCTCGGCATTCCGCGCGATGAGATGCCGCAGGTGCCGACGCA----ATCGCACGG 50145
|| || || ||| | ||||||| | ||||||||||| | ||| ||| ||||| ||
Sbjct 926 GGTACCCTGGGCGTGCCGCGCGCTCAGATGCCGCAGAT-CCG-CGCTGAGCATCGC--GG 981
Query 50146 TGCGCTCGTCAATCACCTGAACGCGCAGGGCATCGAGCACGAGACGA-AGATGGTGCCGG 50204
||| || |||||| |||||| |||| ||||||||| | || || ||| | |||| |
Sbjct 982 TGCCCTGGTCAATTTCCTGAAGGCGCGGGGCATCGACAGCAAGGCGGCAGA-GATGCCAG 1040
Query 50205 CGGCCGAGCTGAAGCCGACGCAGGCCGAGTTCTCGCCCG 50243
| | ||| || || ||||||||||| || ||||||||||
Sbjct 1041 CTGGCGACCTAAAACCGACGCAGGCGGAATTCTCGCCCG 1079
>seq7835
Length=204203
Score = 86.0 bits (94), Expect = 3e-12
Identities = 74/91 (81%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 7810 TGGAGGCGTGGCAGAGTGGTTTAATGTACTGGATTTGAAATCCAGCGACGGTA--ACCCG 7867
|||| ||||||||||| ||||||||| || || |||||| || ||| ||| | |
Sbjct 60564 TGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGTCC 60623
Query 7868 TCCGTGAGTTCGAATCTCACCGCCTCCGCCA 7898
||||||||||||||||||||||| |||||||
Sbjct 60624 TCCGTGAGTTCGAATCTCACCGCTTCCGCCA 60654
>seq6714
Length=1758414
Score = 84.2 bits (92), Expect = 9e-12
Identities = 202/301 (67%), Gaps = 11/301 (4%)
Strand=Plus/Minus
Query 9704 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCCGCTATCTCCC 9763
|||||| || ||||| || || || ||| | || || ||||||||| ||| || |
Sbjct 198762 CGTCAATAAGGTCATTCTGGTTGGTAATTTGGGCGCGGACCCGGAAGTCCG---TCGGCT 198706
Query 9764 GAGC---GGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGA-TCGTTACAAGGACA 9819
|| || || || || |||||||||| |||| || | || || | | | |||
Sbjct 198705 GAATTCGGGTGATGCGGTCGTCAACATCCGCGTCGCCACCTCGGAATCCTGGCGCG-ACA 198647
Query 9820 AAGCCAGCGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCGTCGCCTTCTTCGGC---C 9876
| | ||||| ||| ||| |||||||||||| ||||| | ||||| | |
Sbjct 198646 AGAACTCGGGCGAACGCAAGGAAAAGACCGAGTGGCATAACGTCGTCATCTTCAACGATC 198587
Query 9877 GCCTCGCCGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCGGTCTACATCGAGGGGC 9936
|||||| || ||| ||| | | ||| |||||| ||| || ||||||| |
Sbjct 198586 AGCTCGCCAAGGTCGCCGAGCAATATCTGAAGAAGGGCATGAAGGTTTATGTCGAGGGTC 198527
Query 9937 GCATCAAAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCG 9996
| | || || || |||||||| || ||||||||||||||||||||||||||||
Sbjct 198526 AGCTGCAGACCCGCAAATGGCAGGACCAGCAGGGCCAGGATCGCTACACGACCGAGATCG 198467
Query 9997 T 9997
|
Sbjct 198466 T 198466
>seq8237
Length=506431
Score = 82.4 bits (90), Expect = 3e-11
Identities = 74/92 (80%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 7809 ATGGAGGCGTGGCAGAGTGGTTTAATGTACTGGATTTGAAATCCAGCGACGGTA--ACCC 7866
||||| ||||||||||| ||||||||| || || |||||| | ||| ||| | |
Sbjct 133637 ATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACGGACGAGGGTGTGAGTC 133578
Query 7867 GTCCGTGAGTTCGAATCTCACCGCCTCCGCCA 7898
||||||||||||||||||||||| |||||||
Sbjct 133577 CTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 133546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 201284651132187
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |