Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_020205.1 Length=42963 Score E Sequences producing significant alignments: (Bits) Value seq9777 405 1e-108 seq10554 228 2e-55 seq11405 179 1e-40 seq11001 80.6 7e-11 >seq9777 Length=39614 Score = 405 bits (448), Expect = 1e-108 Identities = 532/735 (72%), Gaps = 23/735 (3%) Strand=Plus/Plus Query 15811 ATCGTGGAAGTGGCCACGCCCTACGACGAAGCGAAGCTGCGCAGCGTGCGCTTCACCCAG 15870 ||||| || ||||||||||| ||| || | | | | || ||||| ||| ||| Sbjct 32837 ATCGTCGAGGTGGCCACGCCATACACCGGCGAGGACATCTACAAGGTGCGGCACACGCAG 32896 Query 15871 TCGGCGGACGTTCTCTACATCGTCCACGGCCAGGTGCCGCAGAAGGAACTGCGCCGCCTG 15930 ||||| ||||| || | | | || ||| | | |||| |||||| ||||||||| | Sbjct 32897 TCGGCCGACGTGCTGTTCCTGGTGCACCCGTGGATCCCGCCGAAGGAGCTGCGCCGCGTT 32956 Query 15931 GCGGTCAACCAGTTCGAACTGCGCGACTTCGCGTTCAAGCGCGGGCCGTTCCGCCCGTTC 15990 || ||| |||||||||||||||||||||||| || | ||| || || |||||||||||| Sbjct 32957 GCCGTCGACCAGTTCGAACTGCGCGACTTCGAGTACCGGCGTGGCCCATTCCGCCCGTTC 33016 Query 15991 AATAGCGACGAAG-CGCTCATCATGGCCGTGTCTGGCACCACCGGCATCGTCACGGTCAG 16049 || | |||||| | ||| | | |||| ||||| || ||| ||| | || | || | Sbjct 33017 AACAACGACGAGGCCGCGC-TGCTGGCGGTGTCCGGTACCCAGGGCGTGGTGCCCGTGAC 33075 Query 16050 CACCAACGTGGACACCTTCACCGCCGACATGGTGGGTTCGCTGCTGTACGTCGAGGAAAA 16109 ||||||||| ||||||||||| || ||||| || ||||||||||||| ||||||||| Sbjct 33076 CACCAACGTCCCGACCTTCACCGCGGAGATGGTCGGCTCGCTGCTGTACGCCGAGGAAAA 33135 Query 16110 GGAACTGCGCGGCGTGAAGCCGTGGGCGTCGGCCGAAAAGAACGTGCCGGTGGGCGCGCT 16169 |||||||||| ||||| || |||| | |||| || |||||||||| | |||| || || Sbjct 33136 GGAACTGCGCTCGGTGAAACCCTGGGTGGCGGCGGAGAAGAACGTGCTGCTGGGTGCCCT 33195 Query 16170 TCGCCGGTCGGACAGCAAGGTCTACCGCTGCGTGAGCATTCC------GGCCAGCCTGGG 16223 ||||| ||| ||||||||||||||||||||| | || | || |||||| Sbjct 33196 CCGCCGAAGCGACCAGAAGGTCTACCGCTGCGTGAGCGTCCCCGTGTTGACCGGCCTGG- 33254 Query 16224 CAGCAAGGGCACGCCCTACTGGGTCGCCGGCAACGTGCGCCCGATCCATGACAGCGGC-- 16281 | || ||||| |||| || ||||| ||||||||| | || ||||||||| Sbjct 33255 -----AAGGAACGCCGTACTACGTTTGCGGCAGCGTGCGCCCCGTGCACGACAGCGGCCG 33309 Query 16282 ----CGTGCCTTCGACGGTCCGCAGGACATCAAGGACGACGGCGTGAACAGCTACGCGGT 16337 ||||| |||||||| ||||||||| | ||| |||| ||| ||| |||||| || Sbjct 33310 TGGGCGTGCGTTCGACGGCCCGCAGGACGTGAAGTTCGACAACGTTAACGACTACGCCGT 33369 Query 16338 CGGCGTGGAATGGGAATTCCTGCACAACACCTTCGGCATCCTGCAGGTGCAGTCCTTCAC 16397 ||| || |||||||||| | ||||| | ||||| ||| || || | | ||||| Sbjct 33370 CGGGGTCGAATGGGAATACGTGCACGGCGGGTTCGGGATCATGAAGATCACCGCGTTCAC 33429 Query 16398 TGACGCGCGCCACGTGCAGGCGGTCGTGATCGAGCGCGTACCGGACAGCATCGTGGGCAC 16457 |||| | | || || ||||||||||| | ||||||||||||||||||| Sbjct 33430 CAGCGCGTTCGAGGTCACCGCCACGGTGATCGAGCGGATCCCGGACAGCATCGTGGGCAA 33489 Query 16458 CGCGCCGGCACC---GGCCAATAGCTGGACGTTCAGCGGCGACGGCACCACCAAGGTGTT 16514 || |||| | || ||| | |||||||||||||||||||||||||| || ||| Sbjct 33490 CGTGCCGCCGCCGGTGGCGGGTCCGTGGACGTTCAGCGGCGACGGCACCACGAAACAGTT 33549 Query 16515 CAGCATCACGGGCGC 16529 | |||| | ||||| Sbjct 33550 CTCCATCCCCGGCGC 33564 Score = 405 bits (448), Expect = 1e-108 Identities = 465/621 (75%), Gaps = 6/621 (1%) Strand=Plus/Plus Query 16931 CGATTACCCCAACTTCGGCCGGTCCTCGCCCATCGTGGACAGCGACACGGTGACGTTCGT 16990 ||||||||||||||||||||| |||||| ||||| ||||||||| ||||| ||||| Sbjct 34006 CGATTACCCCAACTTCGGCCGCAGCTCGCCGATCGTCGACAGCGACGCGGTGTCGTTCAC 34065 Query 16991 CATCAACGCGCGCCAGGTAAACACGGTGAAAGACTTGGTGCCGCTGGACAACCTGCTGGT 17050 ||||||||||||||||| || || | ||| |||| |||||||||| ||||||||| Sbjct 34066 GATCAACGCGCGCCAGGTGAATGCGATTCGCGACCTGGTTCCGCTGGACAGCCTGCTGGT 34125 Query 17051 GATGACCACGGGCGGCGAATACAAGGTCACGGGCGGGCAGGACGACGTGGTGACGCCCAG 17110 | |||| || |||||||| | |||||||| ||||||||||| || ||||||||||| Sbjct 34126 GCTGACGACTGGCGGCGAGTGGAAGGTCACCGGCGGGCAGGATTCAGTTGTGACGCCCAG 34185 Query 17111 CACCATCGGCGTCAAGAACCAGGGCAATGCCGGCAGCGGCGATGTGCAGTCCAAGCTGAT 17170 |||||||||| ||||| ||| | |||| |||||| ||||| | | || | Sbjct 34186 CACCATCGGCATCAAGCCGCAGTCCGCGTATGGCACCGGCGACCTGCAGGCGCGGGTGCT 34245 Query 17171 TGGCGAGTCGGCCATCTTCATCCAGGAAGAGGGCCAGAAGATCCGCGATCTGCGCTACCA 17230 ||||||||||| | ||| | |||| |||||||| | ||||||||| ||||| Sbjct 34246 GGGCGAGTCGGCGGTGTTCCTGCAGGCGCAGGGCCAGCGTGTACGCGATCTGGCTTACCA 34305 Query 17231 GTTCGAAAAGGACGGCTTCCGCGGCAACGACATCAGCGTGTGGGCCGATCACTTGTTCGC 17290 |||||| ||||||||||||||||||||||| |||||| | |||||||||||| || | || Sbjct 34306 GTTCGAGAAGGACGGCTTCCGCGGCAACGAGATCAGCATCTGGGCCGATCACCTGGT-GC 34364 Query 17291 TGGCTTCGAAGTCCAGTGG-ATCGAATACTGGAAGGCGCCGTGGCAAGTGGTGTGGTT-- 17347 || | | || | | || ||||||||| | | |||||| |||| | ||||| | Sbjct 34365 AGGGCTACACGTTCCGCGGCATCGAATACAGCACGGCGCCCTGGCCGATTCTGTGGATGC 34424 Query 17348 CACGCGCGACGATGGCGTGCGCATCGGCTGCACGTACATGCCGGAACAGGAGGTCGTGGG 17407 ||||| || || || |||| |||||||||||||| ||||| || ||||||||| || Sbjct 34425 CACGCACG--GACGGTGTGCTGATCGGCTGCACGTATATGCCCGAGCAGGAGGTCACTGG 34482 Query 17408 CTGGCACTGGCACGACACCGATGGCCTGTTCCTGGACGCCTGCGCGCTGCCGGGCAAGAA 17467 |||||| |||||| ||||| |||| | | ||||||| ||| || || ||| ||| Sbjct 34483 CTGGCATCCGCACGAAACCGACGGCCAGGTGCTGGACGTCTGTTGCCTACCTGGCGAGAT 34542 Query 17468 GGAGTCGGAATGCTATTTCCTGGTGGAACGGTTGATCGACGGCGAAGTGGTGCAGTGCAT 17527 || | || ||| | |||||| || | ||| |||||||| ||| |||| | | Sbjct 34543 CGAAACCGAGGTCTACCTGCTGGTGCGCCGCCTCATCAACGGCGAATGGGTCCAGTACGT 34602 Query 17528 CGAACAGCAGGCGCCGACCCG 17548 || ||| |||||||||||| Sbjct 34603 GGAGCAGATGGCGCCGACCCG 34623 Score = 334 bits (370), Expect = 2e-87 Identities = 611/889 (69%), Gaps = 47/889 (5%) Strand=Plus/Plus Query 9611 CTGGATGCCCGACTGGATGCAGGTGACCGAGTACATCGACCCGGCCCGCGGCCAGTTCAA 9670 ||||| |||||||| |||||| | |||||| | ||||| ||||||||| ||| | Sbjct 27340 CTGGAACACCGACTGGCGCCAGGTGTCGGAGTACGTGGACCCAACCCGCGGCCGCTTCTA 27399 Query 9671 CGGCGAGGGCACCACCAGCACCAGGAAGAAGCGCAGCCGGTCCAAGATCATCAACGGCAC 9730 ||||||| | ||| | |||||||| || | |||| ||||| |||||||| |||| Sbjct 27400 CGGCGAGACCGACACGAAGCCCAGGAAG---CGTAACCGGGCCAAGGTCATCAACAGCAC 27456 Query 9731 CGCCACGAAGTGCGTGCGCGTGGCCACTGCCGGCATGTCCTCGCACATGACCAGCAAGGC 9790 |||||| || | ||||| | | ||||||||| || |||||||| ||||| Sbjct 27457 CGCCACCGAGGTCCTGCGCACGATGTCGGCCGGCATGATGTCCCACATGACGCCGAAGGC 27516 Query 9791 CCGGCCGTGGTTCAACCTGACCACGCCGGATCCGGCCATGGGCCAGGTGCAGGACGTGCG 9850 | |||||||||| | | |||||||| ||| | || || | | ||| || Sbjct 27517 GCAGCCGTGGTTCCTGGTCAAGACGCCGGACCCGTCGCTGTCTGAGCAGTTTGGCGTCCG 27576 Query 9851 TGTGTGGCTGGACAACGTGAC-CACCATCCTACGCGACACCCTGGCGAAGTCGAATTTCT 9909 || ||||||||| |||| | || | | | |||||| || |||| | || |||| Sbjct 27577 GGTATGGCTGGACGACGTAGCGCAGCG-CATCCGCGACGCCTTGGCCAGCAGCAACTTCT 27635 Query 9910 ACAAGGCCATGCCGGTCTGCTACACGGAAGACCTGTCCTACGGCGTGGCGGCCATGATGA 9969 |||||||||||||||| ||||||||||||| | | |||| ||| | ||| ||| Sbjct 27636 ACAAGGCCATGCCGGTTGTCTACACGGAAGACGGGCTGTTCGGCACTGCGCCAATGCTGA 27695 Query 9970 TCGT-GGAGAACCCCGAAGAGGTCGTGCGCTTCCACCCGCTGACCATCGGCAGCTATGCC 10028 || | | ||| || || ||||| || || ||| || |||||||| |||| |||||| Sbjct 27696 TCCTCGAAGATCCGCG-CGAGGTGGTCCGGTTCTACTCGCTGACCGCAGGCACCTATGCG 27754 Query 10029 ATCGGGCTGGACGACGCCGGCA--AGGTCGATTCGCTGTGGCGCTGCTACACGAAGACCG 10086 | ||||||||||| || ||| ||||| |||||||||||| | ||||||||||| | Sbjct 27755 GTGGGGCTGGACGA--CCAGCAGCGTGTCGACTCGCTGTGGCGCCGGTACACGAAGACTG 27812 Query 10087 CGCGCCAGCTGGTGCAGAAGTACGGCCGGCTGGACCCGGAGACGGGGCAGCGCGTGCCCG 10146 | || ||||||| |||| ||||| | |||| ||| | ||| Sbjct 27813 CCCGGCAGCTGGAGCAGCGCTACGG-----------TGCAGAC-CGGCTG-------CCG 27853 Query 10147 ACGAATCGAAGCTGCCCCAGCGCATCATCCAGGCGTACAAGCGCAGCCCGGACCAGGAAT 10206 | ||| || || | || ||| |||| || |||| || | Sbjct 27854 A-GAA----------CCGTTCGGGACTGCCTGGCCAACAATGGC------GACCGCGAGT 27896 Query 10207 TCACCGTGGAAGCGCTGTATGAGCCGAACCCGGACGCGCGCCCTGGCATGGGTCCGCTGG 10266 ||| ||| ||| ||||| |||||||| || ||| |||||| || || || ||||||| Sbjct 27897 TCATCGTTGAATCGCTGATCGAGCCGAATCCAAACGAGCGCCCCGGTATCGGGCCGCTGG 27956 Query 10267 GCGTCCAGGCGTCGAAGTTCCGGCCGTTCCGCGAAGTGGTGTGGATCGCCGGCAGCGGCG 10326 | | |||||| || ||||||| || | |||||| || || ||||||| || ||| Sbjct 27957 GGCTGCAGGCGCCGCAGTTCCGTCCATACCGCGAGGTAGTCTGGATCGATGGTGTTGGCA 28016 Query 10327 ACGAAAAGCACGGCGTGCTGGACATCGGCGGGCACTACGAACAGCCGTTCGTGTCCATCC 10386 || | ||||| | |||||||||||||||||||||||| |||||||||| | Sbjct 28017 CCGCCGATCACGGGATTCTGGACATCGGCGGGCACTACGAAGCGCCGTTCGTGGTGGCTC 28076 Query 10387 GCTTCAACCCGGTAGGCGATGACACCTATTCCGCATGCCCTGGCACCGACTCGCTGGGCG 10446 ||| || ||||| | || ||| || ||| | |||| | ||||| |||| | Sbjct 28077 GCTGGAATCCGGTGGCTGAAGACGTGTACTCCACCAGCCCGGCGGTCGACTGCTTGGGAG 28136 Query 10447 ACATCAAGCAGCTGCAGTATCTGGAAGGCCAGAAGCTGCGCCTCATCGA 10495 ||||||||||||||||||||||||||||| | |||||||| || || || Sbjct 28137 ACATCAAGCAGCTGCAGTATCTGGAAGGCGAAAAGCTGCGTCTGATGGA 28185 Score = 199 bits (220), Expect = 1e-46 Identities = 326/459 (71%), Gaps = 17/459 (4%) Strand=Plus/Plus Query 10671 GAAGCGCGCATCCAGGATTCGTTCTACTACAACCTGTTCCTGATGCTGGAATCGCTGGGC 10730 || || |||||| || | |||| ||| | || ||||||||||||||| ||||||| Sbjct 28517 GAGGCCCGCATCGAGCGGGCCTTCTTCTATCAGCTCTTCCTGATGCTGGAAGCGCTGGGT 28576 Query 10731 GAGGCCTCGGGCCGGACGGCCACGGAAATCGCCGAGCGCAAGGAAGAGAAGGCCACCGTG 10790 || | | ||| |||||||| || ||| || ||||||||||||||||| ||||| Sbjct 28577 GACAAGACTGACCGCACGGCCACCGAGATCTCCACCCGCAAGGAAGAGAAGGCTGCCGTG 28636 Query 10791 CTGGGGCCGACGCTGGAAATCG-TCACCGACGAAGGCCTGGACCCCACCGTGGTCCGGGT 10849 |||| ||| ||||||| | ||| |||| ||||||| || |||||| | ||||| || Sbjct 28637 CTGGCGCCCACGCTGG-AGTCGATCACGGACGAAGTTCTCGACCCCGTGATCGTCCGCGT 28695 Query 10850 GTTCCGTCTGTGCGAGCGCGCCGGCCTGATCCCG---CCGCCGCCGGCCATCCTCGCCAG 10906 |||||| || || |||||||||| |||||| || |||| || | || || | Sbjct 28696 GTTCCGCCTTCTGGAACGCGCCGGCCGCATCCCGGATCCACCGCAGG---TGCTGGC--G 28750 Query 10907 CATCCCGTTGAAGATCGAGTACACCAGCATCCTGGCGCAGGCCATGAAGGCGTCCGGGAC 10966 | | || |||||||||||||||||||||||||||||||||| ||||| | | Sbjct 28751 CCTGCCCCTGAAGATCGAGTACACCAGCATCCTGGCGCAGGCGGCCAAGGCCGCAGCAGT 28810 Query 10967 CAGCGGCATCGAGCGCACCGGGGCGTTCG-TGGCGCAGATGGCCAGCGTGTTCGGC---C 11022 | || |||||||||||| | | ||||| || || | | |||| | |||| | Sbjct 28811 CGGCTCCATCGAGCGCACGGTGCAGTTCGTTGCCGGCGTCGCCCAG-GCAACCGGCGATC 28869 Query 11023 CGGAAGTCATGGACAAGTTCGACGCCGACCAGGCCGTGGACGAATACAGC-GAGCGCACG 11081 | || ||||||||| | ||||| ||||||| || ||||| |||| | ||| | Sbjct 28870 CCTCGGTGATGGACAAGCTGGACGCGGACCAGGTAGTCGACGAGTACACCACTGCGGTC- 28928 Query 11082 GGCGCGCCGGCCAGCATCATCCGCGACGACGATGCCGTG 11120 || | || || ||||||||| ||||||||| ||| Sbjct 28929 GGTGGTCCTGCTTCGATCATCCGCAGCGACGATGCGGTG 28967 Score = 174 bits (192), Expect = 4e-39 Identities = 211/283 (75%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 15304 CTGCAGCCTTCTCTGTCCGGCGGCGAGCTTTCGCCCGGTATGCGTGGCCGCGTCGATCTG 15363 ||||| || || |||||||||||||||| |||||||| | | ||||||||||| ||| Sbjct 32346 CTGCAACCGTCCATGTCCGGCGGCGAGCTGTCGCCCGGGCTTCAGGGCCGCGTCGACCTG 32405 Query 15364 GCGCGCTACGCGATCAGCCTG--GGCATGGCCCGCAACTTCATCACCAAGCCGACCGGCG 15421 | ||||||||| ||||||||| | | || ||||||| ||||||||||||| ||||||| Sbjct 32406 GTGCGCTACGCCATCAGCCTGAAGACCTG--CCGCAACGTCATCACCAAGCCCACCGGCG 32463 Query 15422 GCGGCGCCAAGCGCCCCGGCACGATCTTCCGCGGCCGGGTGAAG-TTCTCCAACAAGCTG 15480 ||| | |||||||| ||| | ||||||||| | | ||| | | | | || Sbjct 32464 GCGCGGAGAAGCGCCCGGGCTATCTGTTCCGCGGCGGCGCCAAGCATAACGACCGCGC-C 32522 Query 15481 ACGCGCCTGGTGCCCTTCATCTACTCCACCAGCGTCAAATACTTGATCGAAATGGGAGAC 15540 || ||| | | || || |||||||| |||| ||||| ||| |||||| ||||| ||| Sbjct 32523 ACCCGCTTTATCCCGTTTATCTACTCGACCACGGTCAAGTACGCGATCGAGATGGGCGAC 32582 Query 15541 GGGTATTTCCGCTTTTGGGTCAACGGCGCGCTGCTGACCAACG 15583 || || | || || ||||| ||||||||| ||| ||||| Sbjct 32583 GGCTACATGCGGTTCTGGGTAGGCGGCGCGCTACTGCGCAACG 32625 Score = 163 bits (180), Expect = 8e-36 Identities = 174/225 (77%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 16669 CAGGAGGCGCTCTAATGGCGCAGGGCTGGACTATCAACCCCACCGCGGACACGATCACCT 16728 |||||||| | ||||||| ||||||||||| ||| | ||| ||||||| ||||| || Sbjct 33702 CAGGAGGCTCAGTAATGGCACAGGGCTGGACGATCGATCCCGGCGCGGACCTGATCAACT 33761 Query 16729 TCTACGAAGCGCCGCCGGTTGGGACGAACAACATCCTGGTGAACGAACTGGCCGATGCTG 16788 ||||||| || |||||| || || ||||||||| ||||| || | | || ||| | Sbjct 33762 TCTACGAGGCACCGCCGACCGGCACCAACAACATCGCGGTGA-CGCAGTA--CGCTGCCG 33818 Query 16789 GC-CAG--GGTGGCACCGACGTGTGGGCGGTCGGCTCCTGGTCGGGCCGCTACGGCTATC 16845 || | | |||||||| ||||| ||||| |||||| | |||||| ||||||||||| | Sbjct 33819 GCGCTGTCGGTGGCACTGACGTCTGGGCTGTCGGCGCATGGTCGTATCGCTACGGCTACC 33878 Query 16846 CCTCGGAAGTCGAATTCTTCGCTGACCGCCTGTGGTTCGCTGGCA 16890 || || ||||| ||||| | ||||||||||||||||| |||| Sbjct 33879 CCGGTGAGGTCGAGTTCTTTGGCGACCGCCTGTGGTTCGCCGGCA 33923 Score = 154 bits (170), Expect = 4e-33 Identities = 203/280 (73%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 18976 GGCGAAGCGAATGCCGAGATTGCGGCCAACAACGCGCGCCTGGCGGCCGACGACGCGGCT 19035 ||| | || || || |||| || | ||||||||| |||||| | ||||| | Sbjct 36446 GGCAAGGCCAACGCTCAGATCGCCGAGAACAACGCGATGCTGGCGCAGCAGGACGCCGAC 36505 Query 19036 GCAGCCCAGGCCATGGGCGACCGCGAATCCCAGCAACAGACCTGGCGCACGCGC---GCG 19092 || | | ||| ||| | ||||||| |||| ||| |||||||||||||| ||| Sbjct 36506 GCCAGCAACGCCCTGGCCACCCGCGAAATGGAGCAGCAGTCCTGGCGCACGCGCATTGCG 36565 Query 19093 ATCATGGGCCAGCAGCGCGCTGCCATCGCGGCAAACGGGATCGATGCCGGGATCGGGACG 19152 |||||||||||||||| || ||||| || ||| ||||| || | |||| ||| Sbjct 36566 ---CTGGGCCAGCAGCGCGCCGCGATCGCCGCCAACAACATCGACCCCACGCTCGGCACG 36622 Query 19153 CCGGCCGAAATCCTGGGCGAAACGGCGCTGTTCGGCGAGGTTGACCAGCAGGCCATCCGG 19212 || || || || ||||||||||| ||| ||||||| ||||| || |||||| | ||||| Sbjct 36623 CCAGCGGAGATTCTGGGCGAAACCGCGATGTTCGGTGAGGTCGATCAGCAGACGATCCGC 36682 Query 19213 CTGAACACCGCGCGCACCGCCTGGGGCTTCAACTCCCAGG 19252 ||||| | ||||| ||||||||||||||| | |||| Sbjct 36683 ATGAACGCTGCGCGGCAGGCCTGGGGCTTCAACGCACAGG 36722 Score = 91.5 bits (100), Expect = 4e-14 Identities = 227/345 (66%), Gaps = 0/345 (0%) Strand=Plus/Plus Query 18455 CGGGCGGCGGACCTGGCCGAACTGTGGGCGTGCAGCCGCAGCGACCCGCTGGATGCGATG 18514 ||| | || || ||| ||| || ||||| ||| |||||| | ||| ||| || || Sbjct 35467 CGGCCCGCAGATGTGGTCGAGCTATGGGCATGCGGCCGCACCACGCCGGCGGAGGCCCTG 35526 Query 18515 CTGCGGGGCATGGAACGCACCGCCGAACCCTTCACCGCCATATACAACGGCCGCCCCGCC 18574 | ||| ||| ||| | | ||| || | | || || || |||| || | Sbjct 35527 CAGCGCGGCCTGGCCGGGAGCGCTGAGGCATGGACGGCGATGGTGCGCGGCGTGCCGGTG 35586 Query 18575 TGCATGTTCGGGGCGTCGCCGTTCTCCATCATGGGCGGCATGGGGTCGGCCTGGATGATC 18634 |||||||||||||| |||| | ||| ||| | |||||||| || || |||||||| || Sbjct 35587 TGCATGTTCGGGGCCACGCCTTACTCGATCCTCGGCGGCATCGGCACGCCCTGGATGGTC 35646 Query 18635 GGCAGCAGCGTGCTGAACCAGCACGGCGCGCAGAAGGATCTGCTGCGGCTGTCGGAACCC 18694 ||| | || || |||| || | |||||||| |||||||| ||||| || Sbjct 35647 GGCTCGACCGGCCTTAACCCGCTGTCGGTCCAGAAGGAGCTGCTGCGCCTGTCCCGCCCG 35706 Query 18695 GTGGTCGAATACATGCAAGACCAGTTCCCGAACCTTCTCTACAATTTCGTGGATCAGCGG 18754 | | | | | |||||| | |||||| | || | ||| | || |||||||| Sbjct 35707 GCGCTGGCACGCATGCAGCAGGCGTTCCCCTCGATGCTGTTCAACGTTGTCGATCAGCGC 35766 Query 18755 AACATCGCAGCGATCCGCTGGCTGCGCTGGCTGGGTTTCCAGTTC 18799 ||| || || |||||| ||| |||||||| ||||| ||| Sbjct 35767 AACGAAGCCGCACAGCGCTGGTTGCATTGGCTGGGCTTCCACTTC 35811 Score = 87.8 bits (96), Expect = 5e-13 Identities = 291/433 (67%), Gaps = 45/433 (10%) Strand=Plus/Plus Query 12669 CGCTGGGCCAGGTCGATGCCAAGCTGGTGGAACTG-GCCGTGGATAAGGCCCGTTTCCG- 12726 |||||||||||||||| |||| || ||| ||| || || || | ||| |||| Sbjct 30387 CGCTGGGCCAGGTCGA---CAAGGTGCTGG--CTGAGCTGTCGACCAA---CGTCTCCGA 30438 Query 12727 CTTCATCGAGAACAAGG------GCCACATCGAGTCGATGGGCCAGCGCTTCTTCCAGTC 12780 |||| || ||| ||| ||||||||||| |||| |||||| ||||| |||| Sbjct 30439 CTTCCGCGTGAAGAAGAACGGCCGCCACATCGAGGCGATCGGCCAGAGCTTCG---AGTC 30495 Query 12781 -CA-TGCTGTACGGCGATCC--GAAC--GTGGTGCCGGAAGACTTCCTGGGCATCGCGCC 12834 || | || | | | ||| || | || | |||||| ||| ||||| | | Sbjct 30496 GCAGTTCTTCAATG-GCTCCAAGATCCAGTCG-GCCGGA----TTCGTGGGCCTGAAGGA 30549 Query 12835 GCGTTACGCCAGCCTGGCCGCCGCCGACCGCAC-CGCCGTGCAGATCATCGACGCGGGCG 12893 ||| ||||||| | ||| ||| |||| | |||| |||||||| | || | || Sbjct 30550 GCGCTACGCCAAC---GCCACCGGTGACCTGTCGCGCC----AGATCATCAA-GCTGTCG 30601 Query 12894 G-CACCGGTTCGGACCTGACCAGTATCTACCTGGTCGGCTGGGGCGAAGGCTCGGTGATG 12952 | ||| || |||||||| |||| | || ||||||||||| | ||||||| Sbjct 30602 GGCACTGGCAGCAACCTGACCTCGATCTGGGTCGTTGGCTGGGGCGATGACTCGGTGTAT 30661 Query 12953 GGCTTCTACCCGAAGGGCACCACCGCCGGCATCAAGCACGTTCCGCTGCCGCAGA--ACA 13010 ||| ||||| | |||||||||| ||||||||| ||||| ||| | || || | Sbjct 30662 GGCATCTACGCCAAGGGCACCAAGGCCGGCATCCAGCAC--ACCGATTACGGCGACGAGC 30719 Query 13011 TGATCGATGATGGTACCGGCGGCAAGTACCTGGGCTATGAAGACTGGTTCGACCTGAATG 13070 || |||| || | | |||||||||||||| || ||| |||||||| | ||| | | Sbjct 30720 TGGTCGACGACGACAACGGCGGCAAGTACCCGGCCTACCGCGACTGGTTTGCGCTGCAGG 30779 Query 13071 CCGGTATCGCGGT 13083 | || | ||||| Sbjct 30780 CTGGCCTGGCGGT 30792 >seq10554 Length=25488 Score = 228 bits (252), Expect = 2e-55 Identities = 844/1307 (65%), Gaps = 28/1307 (2%) Strand=Plus/Plus Query 27263 GTGAACGGCGACCTGTGGAGCAAGTCCCGCCTGCTGGGCCTGGCGCTGAATTGGGGTAAC 27322 || || ||||| || ||||| | |||||||||| |||||| |||| ||||| || Sbjct 895 GTCAATGGCGATCTCTGGAGTCATGAACGCCTGCTGGCCCTGGCTATGAACTGGGGCAAT 954 Query 27323 GCCGGCAACCGCGAAGCGATCCTGACCCAGGCACGCGGGCGCATGTCGTCGG--AACAGG 27380 | || || || |||||||||||||||||| ||| ||||| | || || | |||| Sbjct 955 GAAGGGAATCGACAAGCGATCCTGACCCAGGTACGTGGGCG--TCTCAGCGCTCAGCAGG 1012 Query 27381 TGAACGCCCTGCTGTCGAAGCTGGATTCGCGCGACTGGGCGTTCGTGGAAGACGTGTGGC 27440 || | || ||| | || |||| || | |||||||| ||||| || | |||| Sbjct 1013 TGGGAACTCTACTGGGGCAGTTGGACGCGAGGGACTGGGCATTCGTCCAACGTGCGTGGG 1072 Query 27441 GGTTGATCGATGCGCAGTGGCCTGCCATCGCCGAAGCGCAGAAGCGTCGCACCGGGCTGG 27500 ||||||| || | ||||| |||| |||| || | || ||||| ||||| Sbjct 1073 ACATGATCGACTCGTACTGGCCGCAGATCGTCGAAACGGAACGCCGCCGCACGGGGCTTT 1132 Query 27501 TGCCGGAGCGCGTGCAGGCCAGCGCCTTCACGGTGCAGACCAGTGACGGCAAAACGCTGC 27560 |||||| || || |||||| |||| ||| | ||||| | || | Sbjct 1133 CACCGGAGAAGGTTGAGCGATCCGCCTTTTCGGTTACGACGCGAGACGGAAGCACCATCG 1192 Query 27561 AGATCCCCGGCGGCTACTACCCGTTGAAGTACGAATCCGATTCCGTCAAGACCATGAAGG 27620 | | || || |||||||| |||||| | |||| || || || || | | Sbjct 1193 TCGTGCAGGGAGGTTACTACCCACTGAAGTTCCAATCTGACTCGGTGCGAACGGTTCGAG 1252 Query 27621 ACGAAGCGGACGACTTCTACAACAGCATTCGCACCGGT-CGCACCGCCAAGGCCGCC-AC 27678 | ||||| || |||| | ||| ||| || || || ||| | || ||| || Sbjct 1253 AAGAAGCCGAAGACTATTTCAATGCGATTGGCGTTGGGGCGAACCTGC--GGGCGCAGAC 1310 Query 27679 GCGCAACGGGCACACCATCGAGCGCGTCGGTTCGGGTGGGCGCACTGTGCGCCTGGACAC 27738 |||| | || |||||||| |||||||| ||| |||||||| || || | |||| Sbjct 1311 GCGCGATGGCCACACCATTGAGCGCGTAGGTAGCGGTGGGCGTACCGTCAGGTTGGAACT 1370 Query 27739 GGGCGTGGTGCAGCAGCACCTGCGCGACGTGCTGCGCGATGTCCACCTGGGCGATGCCGT 27798 |||| || | |||| |||| || || | ||||| || || ||||||| | ||| Sbjct 1371 CAACGTGCTGGATACGCACTTGCGGGATGTAATTCGCGACCTCTACTTGGGCGACGGCGT 1430 Query 27799 CAACTACGTCCACAACGTGCTGAACGGCCAGGAATTCAAGGAAGCCGTGGACAGCACCGG 27858 ||||| || | | ||| ||||| ||||| | ||| || || | | || || Sbjct 1431 GAACTATGTGTATAGCGTCCTGAATGGCCAAAAGTTCTCTGAGGCGCTTGCTGATACTGG 1490 Query 27859 CATGCAGGAATACCGGCAGGCGCTGGAAGTGTGGTTGAAGGATGCGGCGGCCGGCGAGAT 27918 |||| ||| ||| |||| ||||| |||||| ||||||| || || |||||||| Sbjct 1491 GATGCTCGAACTTCGGAAGGCTCTGGACTACTGGTTGCAGGATGCTGCAGCTGGCGAGAT 1550 Query 27919 TGGCCCGCGCGTGTGGCACGAACGCGCCATGCGCGCCGCG--CGCCAGAACTTCACCGCC 27976 | |||||| ||||| ||||| || |||| | | ||| ||||||||| ||| Sbjct 1551 GGCACCGCGCATGTGGGCCGAACAGGC--TGCGAGATTCTTCCGCTCGAACTTCACAGCC 1608 Query 27977 TCCGTGCTGACGTTCAAGGTGACCAGTGCGCTGCTGCAGTTGTCGGGCGTCGTGCCCACC 28036 | || ||||||| ||| | ||| |||||||| | ||||||| | | Sbjct 1609 GCGGTTCTGACGTGGCGTGTGTCATCGGCGATGCTGCAGCTTACGGGCGTATCTCAATCG 1668 Query 28037 ATCGTCACCATCGGTCAGGGGCACACCA---TGGCCGGCATCGGCCAGTACCTGG---GC 28090 | || | | | || | || || |||| ||| | ||| || || | Sbjct 1669 ACTGTAATCCTTGGC----GCCAAGCCGATGTGGCAGGCGCTG--CAGAACATGCTTCGT 1722 Query 28091 AAGCCGCGCGCGATGACGCGCTACGTGCGCGAGGCGTCGCCGTACATG-GACAGCCGCCT 28149 | ||||| | | ||||| |||||||| || | ||| | | | | | Sbjct 1723 CACCCGCGAAAGTCCTACCAATACGTTGATGAGGCGTCTTCGAAAATGCGTCTTCGGGC- 1781 Query 28150 GCGCACGCACATCGAAGCGGTGCAGACCGTGATGGATGCGGAAGCCGGCCGGTTCGCCGC 28209 || ||||| || ||||||||| || |||||||| | || ||| | | ||||| Sbjct 1782 GCAGACGCATGCGGACGCGGTGCAGGAGGTATTGGATGCGAAGGCGGGCAGAATTGCCGC 1841 Query 28210 GGGCAAGGCCGCCAGCATCCGGTTCGGTTACTGGATGATCGGCCGCGTGCAGGGGCTGGT 28269 ||| || || ||||| | || ||| ||||| || | || ||| | | || Sbjct 1842 AGGCCGAGCAGCGGCGATCCGTTGGGGCTACGCAATGATGGGGCAGGTACAGCGCATCGT 1901 Query 28270 GGACACCGTGACCTGGCTGGCAGCAGAACAGG-CGGGCATGGCGAAGTTCGGCAACGACG 28328 |||| ||| |||||||| ||||| |||| ||||| ||| |||||||||| ||| Sbjct 1902 GGACGTGCAGACTTGGCTGGCCGCAGAGCAGGTCGGGC-TGGAGAAGTTCGGCGGCGATA 1960 Query 28329 TGGCGCGCGCGCGGGCCTACGCCGACGACGTGGTGACGCGCGCCCAGGGTTCGGGCGAGT 28388 || || || |||||||| |||||||| || ||||| ||||||||||| || | Sbjct 1961 CCGCCAAGGCACGCGCCTACGCTGACGACGTTGTTACGCGGGCCCAGGGTTCCCAGGACT 2020 Query 28389 TCATCGACAAGTCGCCGCTGCAGCGCGGCACGCTGGGCGACAACGTGCGCCAAACCGAGT 28448 | |||||||| |||| || ||||| || ||| || ||| || ||| | || | Sbjct 2021 TTGTCGACAAGACGCCACTTCAGCGAGGAACGTTGAATGACTCGACCCGTCAATCGGAAT 2080 Query 28449 GGATCAAGGCGACCACCGCGCTGCAGGGCTACATGATCGCAAAGGGGAATCTGGCCTACG 28508 || | ||| || || |||| ||||||||| | |||||||| ||||| ||||| Sbjct 2081 GGGTGAAGAGTACGACGATGCTGGCTGGCTACATGCTGGCAAAGGGAAATCTCATCTACG 2140 Query 28509 AACAGACCCGCAAGGCGAATCTGCGCAACCCGCGCCAGGCGATGAAG 28555 ||| ||||||| | | || | |||| || || ||||| ||||| Sbjct 2141 AACGCACCCGCACGACTAACTTCCGCAGTCCTCGACAGGCACTGAAG 2187 Score = 114 bits (126), Expect = 4e-21 Identities = 192/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 28352 GACGACGTGGTGACGCGCGCCCAGGGTTCGGGCGAGTTCATCGACAAGTCGCCGCTGCAG 28411 || ||||| || ||||| ||||||||||| || || |||||||| |||| || ||| Sbjct 2184 GAAGACGTTGTTACGCGGGCCCAGGGTTCCCAGGACTTTGTCGACAAGACGCCACTTCAG 2243 Query 28412 CGCGGCACGCTGGGCGACAACGTGCGCCAAACCGAGTGGATCAAGGCGACCACCGCGCTG 28471 || || ||| || ||| || ||| | || ||| | ||| || || |||| Sbjct 2244 CGAGGAACGTTGAATGACTCGACCCGTCAATCGGAATGGGTGAAGAGTACGACGATGCTG 2303 Query 28472 CAGGGCTACATGATCGCAAAGGGGAATCTGGCCTACGAACAGACCCGCAAGGCGAATCTG 28531 ||||||||| | |||||||| ||||| |||||||| ||||||| | | || | Sbjct 2304 GCTGGCTACATGCTGGCAAAGGGAAATCTCATCTACGAACGCACCCGCACGACTAACTTC 2363 Query 28532 CGCAACCCGCGCCAGGCGATGAAGTGGGCCGCCGACATGGTGATGCTGTTCTCGGTCGAA 28591 |||| || || ||||| ||||||||| | || ||||| | |||||| | | | || Sbjct 2364 CGCAGTCCTCGACAGGCACTGAAGTGGGGCACCCACATGTTCATGCTGCTTGTGTTGGAG 2423 Query 28592 GGCCTGCTGACCGCGGCGCTGACCGCCAAGCTGCCGAA 28629 | || | ||||| || || || ||||||||| || Sbjct 2424 AACTTGATCACCGCAGCATTGCGCGGCAAGCTGCCCAA 2461 >seq11405 Length=110570 Score = 179 bits (198), Expect = 1e-40 Identities = 527/807 (65%), Gaps = 90/807 (11%) Strand=Plus/Minus Query 466 AGCAAGATCGAATGGACCGACGCCACGTTCAATCCGTGGATCGGCTGCACCAAAATCAGC 525 ||||||||||||||||||||| ||||||||| || ||| |||||| || | || Sbjct 75988 AGCAAGATCGAATGGACCGACCACACGTTCAACCCCTGGGAAGGCTGCCAGAAGGTGGGC 75929 Query 526 CCGGCGTGTGACCACTGCTACGCC-AGCGTGTCCACGCCCACG----CGCCGGTTCGGCG 580 |||| |||||||||||||| ||| || | | |||| | || ||| |||| Sbjct 75928 CCGGGCTGTGACCACTGCTATGCCGAGAACCGCAATGCCCGCTTCGCCGGCGGCCAGGCG 75869 Query 581 -TGAAGTGGGGCGCAGGCGAGGAACGCCGCCGCACC-GCGCCTTCGAACTGGCAGCTGCC 638 | || |||||| |||||| |||||||||||| | | | | |||||| | ||||| Sbjct 75868 ATCAACTGGGGCCCAGGCGCACCCCGCCGCCGCACCAGTGTCAGC-AACTGGAACCTGCC 75810 Query 639 GCTGCGGTGGAACGCGCAGCACGATCAGTTCTTCGCGGAGAACGGCCGGCGTCGCCGCGT 698 ||||| |||||||| ||| ||| ||| || || ||||||| || | ||||| Sbjct 75809 CCTGCGCTGGAACGCCCAGGCCGAGGCATTCCAGGCCCAGCACGGCCGCCGCCAGCGCGT 75750 Query 699 GTTCTGCGCGAGCCTGGCCGACGTGTTCGACAACGAAGTGGACCCGT-CGTGGCGCGCCG 757 ||||||||||||||| || ||||| ||||| |||| ||| | |||| ||||||| | Sbjct 75749 GTTCTGCGCGAGCCTCGCTGACGTTTTCGATAACGCAGT-CAGCCGTGAATGGCGCGATG 75691 Query 758 ACCTGTTCGCGTTGATCGAAGCCACGCCGAACCTGGACTGGCTGCTGCTGACCAAGCGCA 817 ||||| || ||||| | ||| || |||| |||||||| || || ||||| | | Sbjct 75690 ACCTGGCAGCCCTGATCCTGGACACCGCGGACCTTGACTGGCTCCTCCTCACCAAAAGGA 75631 Query 818 TCGGCAACGTGTCGAAGATGGCGCCCGCCTCCTGGGTTGGCGGCCCGGTCCAGCACGGCC 877 | || |||| | | || || | | |||| | ||| |||||| Sbjct 75630 TTGGGAACGCG-----GGTG----------CCATGCTAGGCGAAATGTTCCTCGACGGCC 75586 Query 878 CGGACCCGGCGAACATCCATGGCGGGTGGCCGGCTAACGTGTGGCTGGGCGCGACGATCT 937 | ||| || ||||| ||| |||| |||||| | Sbjct 75585 C---------------------------GCCCGCGAACGTCTGGTTGGGTGCGACGGTTG 75553 Query 938 GCAACCAGGCCGAAGCCGACCGCGACATCCCGAAGCTGCTGGCCACGCGCGCGGCGGTCA 997 |||||||||||| |||||||| ||||| | |||||||| || | |||| | || Sbjct 75552 TCAACCAGGCCGAGGCCGACCGGGACATTCTCAAGCTGCTCCGCATCCCCGCGTCCGTGC 75493 Query 998 AGTTCCTGTCGATGGAACCGCTGCTGGGTGAAGTGAAGCTGCGCTGGGATTGGGTGAGCG 1057 ||| |||||||||| || |||||||| ||| || | | | || | | Sbjct 75492 GCTTCTTGTCGATGGAGCCCCTGCTGGGGCCTGTG-----TCGTTTGAA--GGCT---TG 75443 Query 1058 GTGGCCGGCCCCTGGGCGGCGGGCCGATGTGCAATCTGCGCGAGCCGTGGAAAACGCCGG 1117 | ||| |||| || | || ||| | || | ||| | | || Sbjct 75442 TTCGCCAACCCC--AGCAAC------AT-CGCAGACGGCAC--------GAATGCTCTGG 75400 Query 1118 AGCCGGAACCGGCCCTGGATTGGGTGATCGTAGGTGGCGAAAGCGGCCATGGCGCCAGGC 1177 | |||| ||||| ||||||||||| || ||||| ||||||| || || | | Sbjct 75399 A---GGAA------CTGGACTGGGTGATCGTCGGCGGCGAGAGCGGCCCCGGTGCGCGTC 75349 Query 1178 CCATG-AACCCTACGTGGGCGCGATTCCTGCGCGATCAGTGCGAAGCCGCTGGCGTGCCT 1236 ||||| | ||| || ||||||| ||||||||| |||||||| |||| ||| | | Sbjct 75348 CCATGCATCCCGAC-TGGGCGCTCAGCCTGCGCGACCAGTGCGAGGCCGTGGGCACGGCC 75290 Query 1237 TTCCTGTTCAAGCAGTGGGGCGAATGG 1263 ||| ||||||||||||||||||| ||| Sbjct 75289 TTCATGTTCAAGCAGTGGGGCGAGTGG 75263 >seq11001 Length=1906 Score = 80.6 bits (88), Expect = 7e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 25489 CGTTGACCAGCACGAACAGTTCGCCCGCGGCTTCGAAGCCTACCTGCGCGAGGGCCGTGC 25548 ||| ||||||||||||||||||||||| |||||||| || |||||| |||||||| || Sbjct 398 CGTCGACCAGCACGAACAGTTCGCCCGGGGCTTCGAGGCGTACCTGGGCGAGGGCAAGGC 339 Query 25549 GCCGTCG 25555 |||| || Sbjct 338 GCCGACG 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137335436512150