Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_020205.1
Length=42963
Score E
Sequences producing significant alignments: (Bits) Value
seq9777 405 1e-108
seq10554 228 2e-55
seq11405 179 1e-40
seq11001 80.6 7e-11
>seq9777
Length=39614
Score = 405 bits (448), Expect = 1e-108
Identities = 532/735 (72%), Gaps = 23/735 (3%)
Strand=Plus/Plus
Query 15811 ATCGTGGAAGTGGCCACGCCCTACGACGAAGCGAAGCTGCGCAGCGTGCGCTTCACCCAG 15870
||||| || ||||||||||| ||| || | | | | || ||||| ||| |||
Sbjct 32837 ATCGTCGAGGTGGCCACGCCATACACCGGCGAGGACATCTACAAGGTGCGGCACACGCAG 32896
Query 15871 TCGGCGGACGTTCTCTACATCGTCCACGGCCAGGTGCCGCAGAAGGAACTGCGCCGCCTG 15930
||||| ||||| || | | | || ||| | | |||| |||||| ||||||||| |
Sbjct 32897 TCGGCCGACGTGCTGTTCCTGGTGCACCCGTGGATCCCGCCGAAGGAGCTGCGCCGCGTT 32956
Query 15931 GCGGTCAACCAGTTCGAACTGCGCGACTTCGCGTTCAAGCGCGGGCCGTTCCGCCCGTTC 15990
|| ||| |||||||||||||||||||||||| || | ||| || || ||||||||||||
Sbjct 32957 GCCGTCGACCAGTTCGAACTGCGCGACTTCGAGTACCGGCGTGGCCCATTCCGCCCGTTC 33016
Query 15991 AATAGCGACGAAG-CGCTCATCATGGCCGTGTCTGGCACCACCGGCATCGTCACGGTCAG 16049
|| | |||||| | ||| | | |||| ||||| || ||| ||| | || | || |
Sbjct 33017 AACAACGACGAGGCCGCGC-TGCTGGCGGTGTCCGGTACCCAGGGCGTGGTGCCCGTGAC 33075
Query 16050 CACCAACGTGGACACCTTCACCGCCGACATGGTGGGTTCGCTGCTGTACGTCGAGGAAAA 16109
||||||||| ||||||||||| || ||||| || ||||||||||||| |||||||||
Sbjct 33076 CACCAACGTCCCGACCTTCACCGCGGAGATGGTCGGCTCGCTGCTGTACGCCGAGGAAAA 33135
Query 16110 GGAACTGCGCGGCGTGAAGCCGTGGGCGTCGGCCGAAAAGAACGTGCCGGTGGGCGCGCT 16169
|||||||||| ||||| || |||| | |||| || |||||||||| | |||| || ||
Sbjct 33136 GGAACTGCGCTCGGTGAAACCCTGGGTGGCGGCGGAGAAGAACGTGCTGCTGGGTGCCCT 33195
Query 16170 TCGCCGGTCGGACAGCAAGGTCTACCGCTGCGTGAGCATTCC------GGCCAGCCTGGG 16223
||||| ||| ||||||||||||||||||||| | || | || ||||||
Sbjct 33196 CCGCCGAAGCGACCAGAAGGTCTACCGCTGCGTGAGCGTCCCCGTGTTGACCGGCCTGG- 33254
Query 16224 CAGCAAGGGCACGCCCTACTGGGTCGCCGGCAACGTGCGCCCGATCCATGACAGCGGC-- 16281
| || ||||| |||| || ||||| ||||||||| | || |||||||||
Sbjct 33255 -----AAGGAACGCCGTACTACGTTTGCGGCAGCGTGCGCCCCGTGCACGACAGCGGCCG 33309
Query 16282 ----CGTGCCTTCGACGGTCCGCAGGACATCAAGGACGACGGCGTGAACAGCTACGCGGT 16337
||||| |||||||| ||||||||| | ||| |||| ||| ||| |||||| ||
Sbjct 33310 TGGGCGTGCGTTCGACGGCCCGCAGGACGTGAAGTTCGACAACGTTAACGACTACGCCGT 33369
Query 16338 CGGCGTGGAATGGGAATTCCTGCACAACACCTTCGGCATCCTGCAGGTGCAGTCCTTCAC 16397
||| || |||||||||| | ||||| | ||||| ||| || || | | |||||
Sbjct 33370 CGGGGTCGAATGGGAATACGTGCACGGCGGGTTCGGGATCATGAAGATCACCGCGTTCAC 33429
Query 16398 TGACGCGCGCCACGTGCAGGCGGTCGTGATCGAGCGCGTACCGGACAGCATCGTGGGCAC 16457
|||| | | || || ||||||||||| | |||||||||||||||||||
Sbjct 33430 CAGCGCGTTCGAGGTCACCGCCACGGTGATCGAGCGGATCCCGGACAGCATCGTGGGCAA 33489
Query 16458 CGCGCCGGCACC---GGCCAATAGCTGGACGTTCAGCGGCGACGGCACCACCAAGGTGTT 16514
|| |||| | || ||| | |||||||||||||||||||||||||| || |||
Sbjct 33490 CGTGCCGCCGCCGGTGGCGGGTCCGTGGACGTTCAGCGGCGACGGCACCACGAAACAGTT 33549
Query 16515 CAGCATCACGGGCGC 16529
| |||| | |||||
Sbjct 33550 CTCCATCCCCGGCGC 33564
Score = 405 bits (448), Expect = 1e-108
Identities = 465/621 (75%), Gaps = 6/621 (1%)
Strand=Plus/Plus
Query 16931 CGATTACCCCAACTTCGGCCGGTCCTCGCCCATCGTGGACAGCGACACGGTGACGTTCGT 16990
||||||||||||||||||||| |||||| ||||| ||||||||| ||||| |||||
Sbjct 34006 CGATTACCCCAACTTCGGCCGCAGCTCGCCGATCGTCGACAGCGACGCGGTGTCGTTCAC 34065
Query 16991 CATCAACGCGCGCCAGGTAAACACGGTGAAAGACTTGGTGCCGCTGGACAACCTGCTGGT 17050
||||||||||||||||| || || | ||| |||| |||||||||| |||||||||
Sbjct 34066 GATCAACGCGCGCCAGGTGAATGCGATTCGCGACCTGGTTCCGCTGGACAGCCTGCTGGT 34125
Query 17051 GATGACCACGGGCGGCGAATACAAGGTCACGGGCGGGCAGGACGACGTGGTGACGCCCAG 17110
| |||| || |||||||| | |||||||| ||||||||||| || |||||||||||
Sbjct 34126 GCTGACGACTGGCGGCGAGTGGAAGGTCACCGGCGGGCAGGATTCAGTTGTGACGCCCAG 34185
Query 17111 CACCATCGGCGTCAAGAACCAGGGCAATGCCGGCAGCGGCGATGTGCAGTCCAAGCTGAT 17170
|||||||||| ||||| ||| | |||| |||||| ||||| | | || |
Sbjct 34186 CACCATCGGCATCAAGCCGCAGTCCGCGTATGGCACCGGCGACCTGCAGGCGCGGGTGCT 34245
Query 17171 TGGCGAGTCGGCCATCTTCATCCAGGAAGAGGGCCAGAAGATCCGCGATCTGCGCTACCA 17230
||||||||||| | ||| | |||| |||||||| | ||||||||| |||||
Sbjct 34246 GGGCGAGTCGGCGGTGTTCCTGCAGGCGCAGGGCCAGCGTGTACGCGATCTGGCTTACCA 34305
Query 17231 GTTCGAAAAGGACGGCTTCCGCGGCAACGACATCAGCGTGTGGGCCGATCACTTGTTCGC 17290
|||||| ||||||||||||||||||||||| |||||| | |||||||||||| || | ||
Sbjct 34306 GTTCGAGAAGGACGGCTTCCGCGGCAACGAGATCAGCATCTGGGCCGATCACCTGGT-GC 34364
Query 17291 TGGCTTCGAAGTCCAGTGG-ATCGAATACTGGAAGGCGCCGTGGCAAGTGGTGTGGTT-- 17347
|| | | || | | || ||||||||| | | |||||| |||| | ||||| |
Sbjct 34365 AGGGCTACACGTTCCGCGGCATCGAATACAGCACGGCGCCCTGGCCGATTCTGTGGATGC 34424
Query 17348 CACGCGCGACGATGGCGTGCGCATCGGCTGCACGTACATGCCGGAACAGGAGGTCGTGGG 17407
||||| || || || |||| |||||||||||||| ||||| || ||||||||| ||
Sbjct 34425 CACGCACG--GACGGTGTGCTGATCGGCTGCACGTATATGCCCGAGCAGGAGGTCACTGG 34482
Query 17408 CTGGCACTGGCACGACACCGATGGCCTGTTCCTGGACGCCTGCGCGCTGCCGGGCAAGAA 17467
|||||| |||||| ||||| |||| | | ||||||| ||| || || ||| |||
Sbjct 34483 CTGGCATCCGCACGAAACCGACGGCCAGGTGCTGGACGTCTGTTGCCTACCTGGCGAGAT 34542
Query 17468 GGAGTCGGAATGCTATTTCCTGGTGGAACGGTTGATCGACGGCGAAGTGGTGCAGTGCAT 17527
|| | || ||| | |||||| || | ||| |||||||| ||| |||| | |
Sbjct 34543 CGAAACCGAGGTCTACCTGCTGGTGCGCCGCCTCATCAACGGCGAATGGGTCCAGTACGT 34602
Query 17528 CGAACAGCAGGCGCCGACCCG 17548
|| ||| ||||||||||||
Sbjct 34603 GGAGCAGATGGCGCCGACCCG 34623
Score = 334 bits (370), Expect = 2e-87
Identities = 611/889 (69%), Gaps = 47/889 (5%)
Strand=Plus/Plus
Query 9611 CTGGATGCCCGACTGGATGCAGGTGACCGAGTACATCGACCCGGCCCGCGGCCAGTTCAA 9670
||||| |||||||| |||||| | |||||| | ||||| ||||||||| ||| |
Sbjct 27340 CTGGAACACCGACTGGCGCCAGGTGTCGGAGTACGTGGACCCAACCCGCGGCCGCTTCTA 27399
Query 9671 CGGCGAGGGCACCACCAGCACCAGGAAGAAGCGCAGCCGGTCCAAGATCATCAACGGCAC 9730
||||||| | ||| | |||||||| || | |||| ||||| |||||||| ||||
Sbjct 27400 CGGCGAGACCGACACGAAGCCCAGGAAG---CGTAACCGGGCCAAGGTCATCAACAGCAC 27456
Query 9731 CGCCACGAAGTGCGTGCGCGTGGCCACTGCCGGCATGTCCTCGCACATGACCAGCAAGGC 9790
|||||| || | ||||| | | ||||||||| || |||||||| |||||
Sbjct 27457 CGCCACCGAGGTCCTGCGCACGATGTCGGCCGGCATGATGTCCCACATGACGCCGAAGGC 27516
Query 9791 CCGGCCGTGGTTCAACCTGACCACGCCGGATCCGGCCATGGGCCAGGTGCAGGACGTGCG 9850
| |||||||||| | | |||||||| ||| | || || | | ||| ||
Sbjct 27517 GCAGCCGTGGTTCCTGGTCAAGACGCCGGACCCGTCGCTGTCTGAGCAGTTTGGCGTCCG 27576
Query 9851 TGTGTGGCTGGACAACGTGAC-CACCATCCTACGCGACACCCTGGCGAAGTCGAATTTCT 9909
|| ||||||||| |||| | || | | | |||||| || |||| | || ||||
Sbjct 27577 GGTATGGCTGGACGACGTAGCGCAGCG-CATCCGCGACGCCTTGGCCAGCAGCAACTTCT 27635
Query 9910 ACAAGGCCATGCCGGTCTGCTACACGGAAGACCTGTCCTACGGCGTGGCGGCCATGATGA 9969
|||||||||||||||| ||||||||||||| | | |||| ||| | ||| |||
Sbjct 27636 ACAAGGCCATGCCGGTTGTCTACACGGAAGACGGGCTGTTCGGCACTGCGCCAATGCTGA 27695
Query 9970 TCGT-GGAGAACCCCGAAGAGGTCGTGCGCTTCCACCCGCTGACCATCGGCAGCTATGCC 10028
|| | | ||| || || ||||| || || ||| || |||||||| |||| ||||||
Sbjct 27696 TCCTCGAAGATCCGCG-CGAGGTGGTCCGGTTCTACTCGCTGACCGCAGGCACCTATGCG 27754
Query 10029 ATCGGGCTGGACGACGCCGGCA--AGGTCGATTCGCTGTGGCGCTGCTACACGAAGACCG 10086
| ||||||||||| || ||| ||||| |||||||||||| | ||||||||||| |
Sbjct 27755 GTGGGGCTGGACGA--CCAGCAGCGTGTCGACTCGCTGTGGCGCCGGTACACGAAGACTG 27812
Query 10087 CGCGCCAGCTGGTGCAGAAGTACGGCCGGCTGGACCCGGAGACGGGGCAGCGCGTGCCCG 10146
| || ||||||| |||| ||||| | |||| ||| | |||
Sbjct 27813 CCCGGCAGCTGGAGCAGCGCTACGG-----------TGCAGAC-CGGCTG-------CCG 27853
Query 10147 ACGAATCGAAGCTGCCCCAGCGCATCATCCAGGCGTACAAGCGCAGCCCGGACCAGGAAT 10206
| ||| || || | || ||| |||| || |||| || |
Sbjct 27854 A-GAA----------CCGTTCGGGACTGCCTGGCCAACAATGGC------GACCGCGAGT 27896
Query 10207 TCACCGTGGAAGCGCTGTATGAGCCGAACCCGGACGCGCGCCCTGGCATGGGTCCGCTGG 10266
||| ||| ||| ||||| |||||||| || ||| |||||| || || || |||||||
Sbjct 27897 TCATCGTTGAATCGCTGATCGAGCCGAATCCAAACGAGCGCCCCGGTATCGGGCCGCTGG 27956
Query 10267 GCGTCCAGGCGTCGAAGTTCCGGCCGTTCCGCGAAGTGGTGTGGATCGCCGGCAGCGGCG 10326
| | |||||| || ||||||| || | |||||| || || ||||||| || |||
Sbjct 27957 GGCTGCAGGCGCCGCAGTTCCGTCCATACCGCGAGGTAGTCTGGATCGATGGTGTTGGCA 28016
Query 10327 ACGAAAAGCACGGCGTGCTGGACATCGGCGGGCACTACGAACAGCCGTTCGTGTCCATCC 10386
|| | ||||| | |||||||||||||||||||||||| |||||||||| |
Sbjct 28017 CCGCCGATCACGGGATTCTGGACATCGGCGGGCACTACGAAGCGCCGTTCGTGGTGGCTC 28076
Query 10387 GCTTCAACCCGGTAGGCGATGACACCTATTCCGCATGCCCTGGCACCGACTCGCTGGGCG 10446
||| || ||||| | || ||| || ||| | |||| | ||||| |||| |
Sbjct 28077 GCTGGAATCCGGTGGCTGAAGACGTGTACTCCACCAGCCCGGCGGTCGACTGCTTGGGAG 28136
Query 10447 ACATCAAGCAGCTGCAGTATCTGGAAGGCCAGAAGCTGCGCCTCATCGA 10495
||||||||||||||||||||||||||||| | |||||||| || || ||
Sbjct 28137 ACATCAAGCAGCTGCAGTATCTGGAAGGCGAAAAGCTGCGTCTGATGGA 28185
Score = 199 bits (220), Expect = 1e-46
Identities = 326/459 (71%), Gaps = 17/459 (4%)
Strand=Plus/Plus
Query 10671 GAAGCGCGCATCCAGGATTCGTTCTACTACAACCTGTTCCTGATGCTGGAATCGCTGGGC 10730
|| || |||||| || | |||| ||| | || ||||||||||||||| |||||||
Sbjct 28517 GAGGCCCGCATCGAGCGGGCCTTCTTCTATCAGCTCTTCCTGATGCTGGAAGCGCTGGGT 28576
Query 10731 GAGGCCTCGGGCCGGACGGCCACGGAAATCGCCGAGCGCAAGGAAGAGAAGGCCACCGTG 10790
|| | | ||| |||||||| || ||| || ||||||||||||||||| |||||
Sbjct 28577 GACAAGACTGACCGCACGGCCACCGAGATCTCCACCCGCAAGGAAGAGAAGGCTGCCGTG 28636
Query 10791 CTGGGGCCGACGCTGGAAATCG-TCACCGACGAAGGCCTGGACCCCACCGTGGTCCGGGT 10849
|||| ||| ||||||| | ||| |||| ||||||| || |||||| | ||||| ||
Sbjct 28637 CTGGCGCCCACGCTGG-AGTCGATCACGGACGAAGTTCTCGACCCCGTGATCGTCCGCGT 28695
Query 10850 GTTCCGTCTGTGCGAGCGCGCCGGCCTGATCCCG---CCGCCGCCGGCCATCCTCGCCAG 10906
|||||| || || |||||||||| |||||| || |||| || | || || |
Sbjct 28696 GTTCCGCCTTCTGGAACGCGCCGGCCGCATCCCGGATCCACCGCAGG---TGCTGGC--G 28750
Query 10907 CATCCCGTTGAAGATCGAGTACACCAGCATCCTGGCGCAGGCCATGAAGGCGTCCGGGAC 10966
| | || |||||||||||||||||||||||||||||||||| ||||| | |
Sbjct 28751 CCTGCCCCTGAAGATCGAGTACACCAGCATCCTGGCGCAGGCGGCCAAGGCCGCAGCAGT 28810
Query 10967 CAGCGGCATCGAGCGCACCGGGGCGTTCG-TGGCGCAGATGGCCAGCGTGTTCGGC---C 11022
| || |||||||||||| | | ||||| || || | | |||| | |||| |
Sbjct 28811 CGGCTCCATCGAGCGCACGGTGCAGTTCGTTGCCGGCGTCGCCCAG-GCAACCGGCGATC 28869
Query 11023 CGGAAGTCATGGACAAGTTCGACGCCGACCAGGCCGTGGACGAATACAGC-GAGCGCACG 11081
| || ||||||||| | ||||| ||||||| || ||||| |||| | ||| |
Sbjct 28870 CCTCGGTGATGGACAAGCTGGACGCGGACCAGGTAGTCGACGAGTACACCACTGCGGTC- 28928
Query 11082 GGCGCGCCGGCCAGCATCATCCGCGACGACGATGCCGTG 11120
|| | || || ||||||||| ||||||||| |||
Sbjct 28929 GGTGGTCCTGCTTCGATCATCCGCAGCGACGATGCGGTG 28967
Score = 174 bits (192), Expect = 4e-39
Identities = 211/283 (75%), Gaps = 6/283 (2%)
Strand=Plus/Plus
Query 15304 CTGCAGCCTTCTCTGTCCGGCGGCGAGCTTTCGCCCGGTATGCGTGGCCGCGTCGATCTG 15363
||||| || || |||||||||||||||| |||||||| | | ||||||||||| |||
Sbjct 32346 CTGCAACCGTCCATGTCCGGCGGCGAGCTGTCGCCCGGGCTTCAGGGCCGCGTCGACCTG 32405
Query 15364 GCGCGCTACGCGATCAGCCTG--GGCATGGCCCGCAACTTCATCACCAAGCCGACCGGCG 15421
| ||||||||| ||||||||| | | || ||||||| ||||||||||||| |||||||
Sbjct 32406 GTGCGCTACGCCATCAGCCTGAAGACCTG--CCGCAACGTCATCACCAAGCCCACCGGCG 32463
Query 15422 GCGGCGCCAAGCGCCCCGGCACGATCTTCCGCGGCCGGGTGAAG-TTCTCCAACAAGCTG 15480
||| | |||||||| ||| | ||||||||| | | ||| | | | | ||
Sbjct 32464 GCGCGGAGAAGCGCCCGGGCTATCTGTTCCGCGGCGGCGCCAAGCATAACGACCGCGC-C 32522
Query 15481 ACGCGCCTGGTGCCCTTCATCTACTCCACCAGCGTCAAATACTTGATCGAAATGGGAGAC 15540
|| ||| | | || || |||||||| |||| ||||| ||| |||||| ||||| |||
Sbjct 32523 ACCCGCTTTATCCCGTTTATCTACTCGACCACGGTCAAGTACGCGATCGAGATGGGCGAC 32582
Query 15541 GGGTATTTCCGCTTTTGGGTCAACGGCGCGCTGCTGACCAACG 15583
|| || | || || ||||| ||||||||| ||| |||||
Sbjct 32583 GGCTACATGCGGTTCTGGGTAGGCGGCGCGCTACTGCGCAACG 32625
Score = 163 bits (180), Expect = 8e-36
Identities = 174/225 (77%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 16669 CAGGAGGCGCTCTAATGGCGCAGGGCTGGACTATCAACCCCACCGCGGACACGATCACCT 16728
|||||||| | ||||||| ||||||||||| ||| | ||| ||||||| ||||| ||
Sbjct 33702 CAGGAGGCTCAGTAATGGCACAGGGCTGGACGATCGATCCCGGCGCGGACCTGATCAACT 33761
Query 16729 TCTACGAAGCGCCGCCGGTTGGGACGAACAACATCCTGGTGAACGAACTGGCCGATGCTG 16788
||||||| || |||||| || || ||||||||| ||||| || | | || ||| |
Sbjct 33762 TCTACGAGGCACCGCCGACCGGCACCAACAACATCGCGGTGA-CGCAGTA--CGCTGCCG 33818
Query 16789 GC-CAG--GGTGGCACCGACGTGTGGGCGGTCGGCTCCTGGTCGGGCCGCTACGGCTATC 16845
|| | | |||||||| ||||| ||||| |||||| | |||||| ||||||||||| |
Sbjct 33819 GCGCTGTCGGTGGCACTGACGTCTGGGCTGTCGGCGCATGGTCGTATCGCTACGGCTACC 33878
Query 16846 CCTCGGAAGTCGAATTCTTCGCTGACCGCCTGTGGTTCGCTGGCA 16890
|| || ||||| ||||| | ||||||||||||||||| ||||
Sbjct 33879 CCGGTGAGGTCGAGTTCTTTGGCGACCGCCTGTGGTTCGCCGGCA 33923
Score = 154 bits (170), Expect = 4e-33
Identities = 203/280 (73%), Gaps = 6/280 (2%)
Strand=Plus/Plus
Query 18976 GGCGAAGCGAATGCCGAGATTGCGGCCAACAACGCGCGCCTGGCGGCCGACGACGCGGCT 19035
||| | || || || |||| || | ||||||||| |||||| | ||||| |
Sbjct 36446 GGCAAGGCCAACGCTCAGATCGCCGAGAACAACGCGATGCTGGCGCAGCAGGACGCCGAC 36505
Query 19036 GCAGCCCAGGCCATGGGCGACCGCGAATCCCAGCAACAGACCTGGCGCACGCGC---GCG 19092
|| | | ||| ||| | ||||||| |||| ||| |||||||||||||| |||
Sbjct 36506 GCCAGCAACGCCCTGGCCACCCGCGAAATGGAGCAGCAGTCCTGGCGCACGCGCATTGCG 36565
Query 19093 ATCATGGGCCAGCAGCGCGCTGCCATCGCGGCAAACGGGATCGATGCCGGGATCGGGACG 19152
|||||||||||||||| || ||||| || ||| ||||| || | |||| |||
Sbjct 36566 ---CTGGGCCAGCAGCGCGCCGCGATCGCCGCCAACAACATCGACCCCACGCTCGGCACG 36622
Query 19153 CCGGCCGAAATCCTGGGCGAAACGGCGCTGTTCGGCGAGGTTGACCAGCAGGCCATCCGG 19212
|| || || || ||||||||||| ||| ||||||| ||||| || |||||| | |||||
Sbjct 36623 CCAGCGGAGATTCTGGGCGAAACCGCGATGTTCGGTGAGGTCGATCAGCAGACGATCCGC 36682
Query 19213 CTGAACACCGCGCGCACCGCCTGGGGCTTCAACTCCCAGG 19252
||||| | ||||| ||||||||||||||| | ||||
Sbjct 36683 ATGAACGCTGCGCGGCAGGCCTGGGGCTTCAACGCACAGG 36722
Score = 91.5 bits (100), Expect = 4e-14
Identities = 227/345 (66%), Gaps = 0/345 (0%)
Strand=Plus/Plus
Query 18455 CGGGCGGCGGACCTGGCCGAACTGTGGGCGTGCAGCCGCAGCGACCCGCTGGATGCGATG 18514
||| | || || ||| ||| || ||||| ||| |||||| | ||| ||| || ||
Sbjct 35467 CGGCCCGCAGATGTGGTCGAGCTATGGGCATGCGGCCGCACCACGCCGGCGGAGGCCCTG 35526
Query 18515 CTGCGGGGCATGGAACGCACCGCCGAACCCTTCACCGCCATATACAACGGCCGCCCCGCC 18574
| ||| ||| ||| | | ||| || | | || || || |||| || |
Sbjct 35527 CAGCGCGGCCTGGCCGGGAGCGCTGAGGCATGGACGGCGATGGTGCGCGGCGTGCCGGTG 35586
Query 18575 TGCATGTTCGGGGCGTCGCCGTTCTCCATCATGGGCGGCATGGGGTCGGCCTGGATGATC 18634
|||||||||||||| |||| | ||| ||| | |||||||| || || |||||||| ||
Sbjct 35587 TGCATGTTCGGGGCCACGCCTTACTCGATCCTCGGCGGCATCGGCACGCCCTGGATGGTC 35646
Query 18635 GGCAGCAGCGTGCTGAACCAGCACGGCGCGCAGAAGGATCTGCTGCGGCTGTCGGAACCC 18694
||| | || || |||| || | |||||||| |||||||| ||||| ||
Sbjct 35647 GGCTCGACCGGCCTTAACCCGCTGTCGGTCCAGAAGGAGCTGCTGCGCCTGTCCCGCCCG 35706
Query 18695 GTGGTCGAATACATGCAAGACCAGTTCCCGAACCTTCTCTACAATTTCGTGGATCAGCGG 18754
| | | | | |||||| | |||||| | || | ||| | || ||||||||
Sbjct 35707 GCGCTGGCACGCATGCAGCAGGCGTTCCCCTCGATGCTGTTCAACGTTGTCGATCAGCGC 35766
Query 18755 AACATCGCAGCGATCCGCTGGCTGCGCTGGCTGGGTTTCCAGTTC 18799
||| || || |||||| ||| |||||||| ||||| |||
Sbjct 35767 AACGAAGCCGCACAGCGCTGGTTGCATTGGCTGGGCTTCCACTTC 35811
Score = 87.8 bits (96), Expect = 5e-13
Identities = 291/433 (67%), Gaps = 45/433 (10%)
Strand=Plus/Plus
Query 12669 CGCTGGGCCAGGTCGATGCCAAGCTGGTGGAACTG-GCCGTGGATAAGGCCCGTTTCCG- 12726
|||||||||||||||| |||| || ||| ||| || || || | ||| ||||
Sbjct 30387 CGCTGGGCCAGGTCGA---CAAGGTGCTGG--CTGAGCTGTCGACCAA---CGTCTCCGA 30438
Query 12727 CTTCATCGAGAACAAGG------GCCACATCGAGTCGATGGGCCAGCGCTTCTTCCAGTC 12780
|||| || ||| ||| ||||||||||| |||| |||||| ||||| ||||
Sbjct 30439 CTTCCGCGTGAAGAAGAACGGCCGCCACATCGAGGCGATCGGCCAGAGCTTCG---AGTC 30495
Query 12781 -CA-TGCTGTACGGCGATCC--GAAC--GTGGTGCCGGAAGACTTCCTGGGCATCGCGCC 12834
|| | || | | | ||| || | || | |||||| ||| ||||| | |
Sbjct 30496 GCAGTTCTTCAATG-GCTCCAAGATCCAGTCG-GCCGGA----TTCGTGGGCCTGAAGGA 30549
Query 12835 GCGTTACGCCAGCCTGGCCGCCGCCGACCGCAC-CGCCGTGCAGATCATCGACGCGGGCG 12893
||| ||||||| | ||| ||| |||| | |||| |||||||| | || | ||
Sbjct 30550 GCGCTACGCCAAC---GCCACCGGTGACCTGTCGCGCC----AGATCATCAA-GCTGTCG 30601
Query 12894 G-CACCGGTTCGGACCTGACCAGTATCTACCTGGTCGGCTGGGGCGAAGGCTCGGTGATG 12952
| ||| || |||||||| |||| | || ||||||||||| | |||||||
Sbjct 30602 GGCACTGGCAGCAACCTGACCTCGATCTGGGTCGTTGGCTGGGGCGATGACTCGGTGTAT 30661
Query 12953 GGCTTCTACCCGAAGGGCACCACCGCCGGCATCAAGCACGTTCCGCTGCCGCAGA--ACA 13010
||| ||||| | |||||||||| ||||||||| ||||| ||| | || || |
Sbjct 30662 GGCATCTACGCCAAGGGCACCAAGGCCGGCATCCAGCAC--ACCGATTACGGCGACGAGC 30719
Query 13011 TGATCGATGATGGTACCGGCGGCAAGTACCTGGGCTATGAAGACTGGTTCGACCTGAATG 13070
|| |||| || | | |||||||||||||| || ||| |||||||| | ||| | |
Sbjct 30720 TGGTCGACGACGACAACGGCGGCAAGTACCCGGCCTACCGCGACTGGTTTGCGCTGCAGG 30779
Query 13071 CCGGTATCGCGGT 13083
| || | |||||
Sbjct 30780 CTGGCCTGGCGGT 30792
>seq10554
Length=25488
Score = 228 bits (252), Expect = 2e-55
Identities = 844/1307 (65%), Gaps = 28/1307 (2%)
Strand=Plus/Plus
Query 27263 GTGAACGGCGACCTGTGGAGCAAGTCCCGCCTGCTGGGCCTGGCGCTGAATTGGGGTAAC 27322
|| || ||||| || ||||| | |||||||||| |||||| |||| ||||| ||
Sbjct 895 GTCAATGGCGATCTCTGGAGTCATGAACGCCTGCTGGCCCTGGCTATGAACTGGGGCAAT 954
Query 27323 GCCGGCAACCGCGAAGCGATCCTGACCCAGGCACGCGGGCGCATGTCGTCGG--AACAGG 27380
| || || || |||||||||||||||||| ||| ||||| | || || | ||||
Sbjct 955 GAAGGGAATCGACAAGCGATCCTGACCCAGGTACGTGGGCG--TCTCAGCGCTCAGCAGG 1012
Query 27381 TGAACGCCCTGCTGTCGAAGCTGGATTCGCGCGACTGGGCGTTCGTGGAAGACGTGTGGC 27440
|| | || ||| | || |||| || | |||||||| ||||| || | ||||
Sbjct 1013 TGGGAACTCTACTGGGGCAGTTGGACGCGAGGGACTGGGCATTCGTCCAACGTGCGTGGG 1072
Query 27441 GGTTGATCGATGCGCAGTGGCCTGCCATCGCCGAAGCGCAGAAGCGTCGCACCGGGCTGG 27500
||||||| || | ||||| |||| |||| || | || ||||| |||||
Sbjct 1073 ACATGATCGACTCGTACTGGCCGCAGATCGTCGAAACGGAACGCCGCCGCACGGGGCTTT 1132
Query 27501 TGCCGGAGCGCGTGCAGGCCAGCGCCTTCACGGTGCAGACCAGTGACGGCAAAACGCTGC 27560
|||||| || || |||||| |||| ||| | ||||| | || |
Sbjct 1133 CACCGGAGAAGGTTGAGCGATCCGCCTTTTCGGTTACGACGCGAGACGGAAGCACCATCG 1192
Query 27561 AGATCCCCGGCGGCTACTACCCGTTGAAGTACGAATCCGATTCCGTCAAGACCATGAAGG 27620
| | || || |||||||| |||||| | |||| || || || || | |
Sbjct 1193 TCGTGCAGGGAGGTTACTACCCACTGAAGTTCCAATCTGACTCGGTGCGAACGGTTCGAG 1252
Query 27621 ACGAAGCGGACGACTTCTACAACAGCATTCGCACCGGT-CGCACCGCCAAGGCCGCC-AC 27678
| ||||| || |||| | ||| ||| || || || ||| | || ||| ||
Sbjct 1253 AAGAAGCCGAAGACTATTTCAATGCGATTGGCGTTGGGGCGAACCTGC--GGGCGCAGAC 1310
Query 27679 GCGCAACGGGCACACCATCGAGCGCGTCGGTTCGGGTGGGCGCACTGTGCGCCTGGACAC 27738
|||| | || |||||||| |||||||| ||| |||||||| || || | ||||
Sbjct 1311 GCGCGATGGCCACACCATTGAGCGCGTAGGTAGCGGTGGGCGTACCGTCAGGTTGGAACT 1370
Query 27739 GGGCGTGGTGCAGCAGCACCTGCGCGACGTGCTGCGCGATGTCCACCTGGGCGATGCCGT 27798
|||| || | |||| |||| || || | ||||| || || ||||||| | |||
Sbjct 1371 CAACGTGCTGGATACGCACTTGCGGGATGTAATTCGCGACCTCTACTTGGGCGACGGCGT 1430
Query 27799 CAACTACGTCCACAACGTGCTGAACGGCCAGGAATTCAAGGAAGCCGTGGACAGCACCGG 27858
||||| || | | ||| ||||| ||||| | ||| || || | | || ||
Sbjct 1431 GAACTATGTGTATAGCGTCCTGAATGGCCAAAAGTTCTCTGAGGCGCTTGCTGATACTGG 1490
Query 27859 CATGCAGGAATACCGGCAGGCGCTGGAAGTGTGGTTGAAGGATGCGGCGGCCGGCGAGAT 27918
|||| ||| ||| |||| ||||| |||||| ||||||| || || ||||||||
Sbjct 1491 GATGCTCGAACTTCGGAAGGCTCTGGACTACTGGTTGCAGGATGCTGCAGCTGGCGAGAT 1550
Query 27919 TGGCCCGCGCGTGTGGCACGAACGCGCCATGCGCGCCGCG--CGCCAGAACTTCACCGCC 27976
| |||||| ||||| ||||| || |||| | | ||| ||||||||| |||
Sbjct 1551 GGCACCGCGCATGTGGGCCGAACAGGC--TGCGAGATTCTTCCGCTCGAACTTCACAGCC 1608
Query 27977 TCCGTGCTGACGTTCAAGGTGACCAGTGCGCTGCTGCAGTTGTCGGGCGTCGTGCCCACC 28036
| || ||||||| ||| | ||| |||||||| | ||||||| | |
Sbjct 1609 GCGGTTCTGACGTGGCGTGTGTCATCGGCGATGCTGCAGCTTACGGGCGTATCTCAATCG 1668
Query 28037 ATCGTCACCATCGGTCAGGGGCACACCA---TGGCCGGCATCGGCCAGTACCTGG---GC 28090
| || | | | || | || || |||| ||| | ||| || || |
Sbjct 1669 ACTGTAATCCTTGGC----GCCAAGCCGATGTGGCAGGCGCTG--CAGAACATGCTTCGT 1722
Query 28091 AAGCCGCGCGCGATGACGCGCTACGTGCGCGAGGCGTCGCCGTACATG-GACAGCCGCCT 28149
| ||||| | | ||||| |||||||| || | ||| | | | | |
Sbjct 1723 CACCCGCGAAAGTCCTACCAATACGTTGATGAGGCGTCTTCGAAAATGCGTCTTCGGGC- 1781
Query 28150 GCGCACGCACATCGAAGCGGTGCAGACCGTGATGGATGCGGAAGCCGGCCGGTTCGCCGC 28209
|| ||||| || ||||||||| || |||||||| | || ||| | | |||||
Sbjct 1782 GCAGACGCATGCGGACGCGGTGCAGGAGGTATTGGATGCGAAGGCGGGCAGAATTGCCGC 1841
Query 28210 GGGCAAGGCCGCCAGCATCCGGTTCGGTTACTGGATGATCGGCCGCGTGCAGGGGCTGGT 28269
||| || || ||||| | || ||| ||||| || | || ||| | | ||
Sbjct 1842 AGGCCGAGCAGCGGCGATCCGTTGGGGCTACGCAATGATGGGGCAGGTACAGCGCATCGT 1901
Query 28270 GGACACCGTGACCTGGCTGGCAGCAGAACAGG-CGGGCATGGCGAAGTTCGGCAACGACG 28328
|||| ||| |||||||| ||||| |||| ||||| ||| |||||||||| |||
Sbjct 1902 GGACGTGCAGACTTGGCTGGCCGCAGAGCAGGTCGGGC-TGGAGAAGTTCGGCGGCGATA 1960
Query 28329 TGGCGCGCGCGCGGGCCTACGCCGACGACGTGGTGACGCGCGCCCAGGGTTCGGGCGAGT 28388
|| || || |||||||| |||||||| || ||||| ||||||||||| || |
Sbjct 1961 CCGCCAAGGCACGCGCCTACGCTGACGACGTTGTTACGCGGGCCCAGGGTTCCCAGGACT 2020
Query 28389 TCATCGACAAGTCGCCGCTGCAGCGCGGCACGCTGGGCGACAACGTGCGCCAAACCGAGT 28448
| |||||||| |||| || ||||| || ||| || ||| || ||| | || |
Sbjct 2021 TTGTCGACAAGACGCCACTTCAGCGAGGAACGTTGAATGACTCGACCCGTCAATCGGAAT 2080
Query 28449 GGATCAAGGCGACCACCGCGCTGCAGGGCTACATGATCGCAAAGGGGAATCTGGCCTACG 28508
|| | ||| || || |||| ||||||||| | |||||||| ||||| |||||
Sbjct 2081 GGGTGAAGAGTACGACGATGCTGGCTGGCTACATGCTGGCAAAGGGAAATCTCATCTACG 2140
Query 28509 AACAGACCCGCAAGGCGAATCTGCGCAACCCGCGCCAGGCGATGAAG 28555
||| ||||||| | | || | |||| || || ||||| |||||
Sbjct 2141 AACGCACCCGCACGACTAACTTCCGCAGTCCTCGACAGGCACTGAAG 2187
Score = 114 bits (126), Expect = 4e-21
Identities = 192/278 (69%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 28352 GACGACGTGGTGACGCGCGCCCAGGGTTCGGGCGAGTTCATCGACAAGTCGCCGCTGCAG 28411
|| ||||| || ||||| ||||||||||| || || |||||||| |||| || |||
Sbjct 2184 GAAGACGTTGTTACGCGGGCCCAGGGTTCCCAGGACTTTGTCGACAAGACGCCACTTCAG 2243
Query 28412 CGCGGCACGCTGGGCGACAACGTGCGCCAAACCGAGTGGATCAAGGCGACCACCGCGCTG 28471
|| || ||| || ||| || ||| | || ||| | ||| || || ||||
Sbjct 2244 CGAGGAACGTTGAATGACTCGACCCGTCAATCGGAATGGGTGAAGAGTACGACGATGCTG 2303
Query 28472 CAGGGCTACATGATCGCAAAGGGGAATCTGGCCTACGAACAGACCCGCAAGGCGAATCTG 28531
||||||||| | |||||||| ||||| |||||||| ||||||| | | || |
Sbjct 2304 GCTGGCTACATGCTGGCAAAGGGAAATCTCATCTACGAACGCACCCGCACGACTAACTTC 2363
Query 28532 CGCAACCCGCGCCAGGCGATGAAGTGGGCCGCCGACATGGTGATGCTGTTCTCGGTCGAA 28591
|||| || || ||||| ||||||||| | || ||||| | |||||| | | | ||
Sbjct 2364 CGCAGTCCTCGACAGGCACTGAAGTGGGGCACCCACATGTTCATGCTGCTTGTGTTGGAG 2423
Query 28592 GGCCTGCTGACCGCGGCGCTGACCGCCAAGCTGCCGAA 28629
| || | ||||| || || || ||||||||| ||
Sbjct 2424 AACTTGATCACCGCAGCATTGCGCGGCAAGCTGCCCAA 2461
>seq11405
Length=110570
Score = 179 bits (198), Expect = 1e-40
Identities = 527/807 (65%), Gaps = 90/807 (11%)
Strand=Plus/Minus
Query 466 AGCAAGATCGAATGGACCGACGCCACGTTCAATCCGTGGATCGGCTGCACCAAAATCAGC 525
||||||||||||||||||||| ||||||||| || ||| |||||| || | ||
Sbjct 75988 AGCAAGATCGAATGGACCGACCACACGTTCAACCCCTGGGAAGGCTGCCAGAAGGTGGGC 75929
Query 526 CCGGCGTGTGACCACTGCTACGCC-AGCGTGTCCACGCCCACG----CGCCGGTTCGGCG 580
|||| |||||||||||||| ||| || | | |||| | || ||| ||||
Sbjct 75928 CCGGGCTGTGACCACTGCTATGCCGAGAACCGCAATGCCCGCTTCGCCGGCGGCCAGGCG 75869
Query 581 -TGAAGTGGGGCGCAGGCGAGGAACGCCGCCGCACC-GCGCCTTCGAACTGGCAGCTGCC 638
| || |||||| |||||| |||||||||||| | | | | |||||| | |||||
Sbjct 75868 ATCAACTGGGGCCCAGGCGCACCCCGCCGCCGCACCAGTGTCAGC-AACTGGAACCTGCC 75810
Query 639 GCTGCGGTGGAACGCGCAGCACGATCAGTTCTTCGCGGAGAACGGCCGGCGTCGCCGCGT 698
||||| |||||||| ||| ||| ||| || || ||||||| || | |||||
Sbjct 75809 CCTGCGCTGGAACGCCCAGGCCGAGGCATTCCAGGCCCAGCACGGCCGCCGCCAGCGCGT 75750
Query 699 GTTCTGCGCGAGCCTGGCCGACGTGTTCGACAACGAAGTGGACCCGT-CGTGGCGCGCCG 757
||||||||||||||| || ||||| ||||| |||| ||| | |||| ||||||| |
Sbjct 75749 GTTCTGCGCGAGCCTCGCTGACGTTTTCGATAACGCAGT-CAGCCGTGAATGGCGCGATG 75691
Query 758 ACCTGTTCGCGTTGATCGAAGCCACGCCGAACCTGGACTGGCTGCTGCTGACCAAGCGCA 817
||||| || ||||| | ||| || |||| |||||||| || || ||||| | |
Sbjct 75690 ACCTGGCAGCCCTGATCCTGGACACCGCGGACCTTGACTGGCTCCTCCTCACCAAAAGGA 75631
Query 818 TCGGCAACGTGTCGAAGATGGCGCCCGCCTCCTGGGTTGGCGGCCCGGTCCAGCACGGCC 877
| || |||| | | || || | | |||| | ||| ||||||
Sbjct 75630 TTGGGAACGCG-----GGTG----------CCATGCTAGGCGAAATGTTCCTCGACGGCC 75586
Query 878 CGGACCCGGCGAACATCCATGGCGGGTGGCCGGCTAACGTGTGGCTGGGCGCGACGATCT 937
| ||| || ||||| ||| |||| |||||| |
Sbjct 75585 C---------------------------GCCCGCGAACGTCTGGTTGGGTGCGACGGTTG 75553
Query 938 GCAACCAGGCCGAAGCCGACCGCGACATCCCGAAGCTGCTGGCCACGCGCGCGGCGGTCA 997
|||||||||||| |||||||| ||||| | |||||||| || | |||| | ||
Sbjct 75552 TCAACCAGGCCGAGGCCGACCGGGACATTCTCAAGCTGCTCCGCATCCCCGCGTCCGTGC 75493
Query 998 AGTTCCTGTCGATGGAACCGCTGCTGGGTGAAGTGAAGCTGCGCTGGGATTGGGTGAGCG 1057
||| |||||||||| || |||||||| ||| || | | | || | |
Sbjct 75492 GCTTCTTGTCGATGGAGCCCCTGCTGGGGCCTGTG-----TCGTTTGAA--GGCT---TG 75443
Query 1058 GTGGCCGGCCCCTGGGCGGCGGGCCGATGTGCAATCTGCGCGAGCCGTGGAAAACGCCGG 1117
| ||| |||| || | || ||| | || | ||| | | ||
Sbjct 75442 TTCGCCAACCCC--AGCAAC------AT-CGCAGACGGCAC--------GAATGCTCTGG 75400
Query 1118 AGCCGGAACCGGCCCTGGATTGGGTGATCGTAGGTGGCGAAAGCGGCCATGGCGCCAGGC 1177
| |||| ||||| ||||||||||| || ||||| ||||||| || || | |
Sbjct 75399 A---GGAA------CTGGACTGGGTGATCGTCGGCGGCGAGAGCGGCCCCGGTGCGCGTC 75349
Query 1178 CCATG-AACCCTACGTGGGCGCGATTCCTGCGCGATCAGTGCGAAGCCGCTGGCGTGCCT 1236
||||| | ||| || ||||||| ||||||||| |||||||| |||| ||| | |
Sbjct 75348 CCATGCATCCCGAC-TGGGCGCTCAGCCTGCGCGACCAGTGCGAGGCCGTGGGCACGGCC 75290
Query 1237 TTCCTGTTCAAGCAGTGGGGCGAATGG 1263
||| ||||||||||||||||||| |||
Sbjct 75289 TTCATGTTCAAGCAGTGGGGCGAGTGG 75263
>seq11001
Length=1906
Score = 80.6 bits (88), Expect = 7e-11
Identities = 58/67 (87%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 25489 CGTTGACCAGCACGAACAGTTCGCCCGCGGCTTCGAAGCCTACCTGCGCGAGGGCCGTGC 25548
||| ||||||||||||||||||||||| |||||||| || |||||| |||||||| ||
Sbjct 398 CGTCGACCAGCACGAACAGTTCGCCCGGGGCTTCGAGGCGTACCTGGGCGAGGGCAAGGC 339
Query 25549 GCCGTCG 25555
|||| ||
Sbjct 338 GCCGACG 332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137335436512150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |