Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq8995 84.2 3e-11 >seq8995 Length=8301158 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/93 (82%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 65443 AATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAG 65502 ||||| ||||||||||||||||| ||| || || |||||||| ||||||||||||||| Sbjct 6968585 AATCCGTTTGACTTTATGGAAAATATTTCACTGGAGGGGAAGACTAACTTCTTTGAGAAG 6968526 Query 65503 CGAGTTGGGGACTATGGGA-AATTGGA-TGATG 65533 |||| || || ||| || ||| ||| ||||| Sbjct 6968525 AGAGTAGGCGAGTATCAGAGAATGGGAGTGATG 6968493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596457303229920