Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq8050 82.4 9e-11 >seq8050 Length=287393 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 39365 GGGGGGACTTGAACCCCCACGACTCAAGGTCAACAGATTTTAAGTCTGGTGCGTCTACCG 39424 || ||||||||||||| || ||| | |||| ||||||||||||||| ||||||||||| Sbjct 202232 GGCGGGACTTGAACCCGCAAGACCAATGGTCGGCAGATTTTAAGTCTGCTGCGTCTACCG 202173 Query 39425 ATTCCGCCAC 39434 ||| |||||| Sbjct 202172 ATTTCGCCAC 202163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566840479276440