Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_021348.1
Length=156558
Score E
Sequences producing significant alignments: (Bits) Value
seq7823 89.7 5e-13
seq9683 86.0 6e-12
>seq7823
Length=199163
Score = 89.7 bits (98), Expect = 5e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 115639 ACCTACGGCATCCTGGTCTACCAGGAGCAGCTGATCCGCACCGCCAAGGAGCTGGCCGGG 115698
||||||||| || | ||||| ||||| ||| |||| | | |||| || ||||| ||
Sbjct 170358 ACCTACGGCGTCATCGTCTATCAGGAACAGGTGATGCAGATCGCCCAGATCCTGGCGGGC 170299
Query 115699 TTCACCCCGGGCGAGGCCGAGCGGCTGCGTAAGGGCATCGGCAAGAAGAAGATGGAG 115755
| || || |||||||||||| | |||||| || ||| ||||||||||||| ||||
Sbjct 170298 TACAGCCTGGGCGAGGCCGACCTGCTGCGCCGGGCCATGGGCAAGAAGAAGAAGGAG 170242
>seq9683
Length=137075
Score = 86.0 bits (94), Expect = 6e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 115639 ACCTACGGCATCCTGGTCTACCAGGAGCAGCTGATCCGCACCGCCAAGGAGCTGGCCGGG 115698
|||||||| ||| ||||||||||||||||| |||| | |||||| ||| ||||| |||
Sbjct 110407 ACCTACGGGATCATGGTCTACCAGGAGCAGGTGATGCAGACCGCCCAGGTGCTGGGCGGC 110466
Query 115699 TTCACCCCGGGCGAGGCCGAGCGGCTGCGTAAGGGCATCGGCAAGAAGAAGATGGAG 115755
| | | | ||||| ||||| | |||| | ||| |||||||||||| | |||
Sbjct 110467 TACTCGCTGGGCGGCGCCGACCTCTTGCGCCGTGCCATGGGCAAGAAGAAGGTCGAG 110523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500763319817520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |