Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq7041 82.4 2e-11 >seq7041 Length=191181 Score = 82.4 bits (90), Expect = 2e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 4875 AGGAGATAACCCTCAAGCATCCAGATTTTATTTACCGCATTCTCTCTGGCAATCTTGCGA 4934 || || || ||||||||| |||||| || || |||||| | | ||| || | ||| Sbjct 26903 AGCAGGTATCCCTCAAGCTGCCAGATCTTGTTGCGAGCATTCGCGCGGGCGATATCGCGC 26962 Query 4935 CCAATTTCAGCGTCGAAATTCTCTGGACTGGCGCAGGCGCTTTCTCCTGTCACGGTGAAG 4994 || || || ||||| || || || |||||||||||||| || || ||||| ||||| Sbjct 26963 CCGATCCTGGCATCGAAGTTTTCCGGGCTGGCGCAGGCGCTCTCGCCAGTCACCGTGAAA 27022 Query 4995 CCGTTTTTCAGCACCAAGACGCA 5017 ||||| | ||| || | ||||| Sbjct 27023 CCGTTCTGCAGGACGAGAACGCA 27045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152017610493612