Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq899 82.4 6e-11
>seq899
Length=2520420
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
|||||| || ||||| || || | || || ||||||||||| | || ||||||
Sbjct 2265541 AATGCAGATCTTTGTAAAGACCCTCACTGGTAAAACCATTACTCTGGAGGTGGAGCCAAG 2265482
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || ||| | || || |||||| || ||||||||| | ||| || ||
Sbjct 2265481 TGACACCATCGAGAATGTCAAGGTGAAGATACAAGAAAAAGAAGGCATCCCCCCAGACCA 2265422
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
||| || | || | ||| || ||||||||||| |||| | || || | || |||||
Sbjct 2265421 ACAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 2265362
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481
||| || ||||| || || ||||| ||||
Sbjct 2265361 CATCCAGAAAGAGTCCACTCTGCACCTGGT 2265332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412765830536087
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |