Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_022052.1
Length=76050
Score E
Sequences producing significant alignments: (Bits) Value
seq15007 84.2 1e-11
seq8424 82.4 4e-11
>seq15007
Length=612
Score = 84.2 bits (92), Expect = 1e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 64716 CGCGTCGTTAGCTCAGTTGGTAGAGCAGCCGACTCTTAATCGGCGGGTCGGGGGTTCAAG 64775
|| |||||||||||||||||||||||||| |||| |||||| | ||||| ||||| ||
Sbjct 248 CGGGTCGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCAGGTTCGAG 307
Query 64776 TCCCTCACGGC 64786
|||| ||||||
Sbjct 308 TCCCGCACGGC 318
>seq8424
Length=263062
Score = 82.4 bits (90), Expect = 4e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 63474 TGTAGCGCAGCTTGGTAGCGCGCCTGATTTGGATTCAGGGGGTCGGAGGTTCAAATCCTT 63533
||||||||||| ||||||||| |||||||||| ||||||||||| |||||| ||||||
Sbjct 49880 TGTAGCGCAGCCTGGTAGCGCACCTGATTTGGGATCAGGGGGTCGCAGGTTCGAATCCTG 49821
Query 63534 CCA 63536
|||
Sbjct 49820 CCA 49818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 243190558663689
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |