Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_022058.1 Length=52519 Score E Sequences producing significant alignments: (Bits) Value seq15007 89.7 2e-13 >seq15007 Length=612 Score = 89.7 bits (98), Expect = 2e-13 Identities = 63/71 (89%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 4231 GGTCTTTCGGGGCAGTAGCTCAGTCGGTAGAGCTGCGGACTCTTAATCCGTAGGTCGCAG 4290 ||||||||||| | ||||||||| |||||||| ||||||| ||||||||| |||||||| Sbjct 241 GGTCTTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCAG 300 Query 4291 GTTCGA-TCCC 4300 |||||| |||| Sbjct 301 GTTCGAGTCCC 311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167909168167598