Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq3373 89.7 5e-13 >seq3373 Length=4402009 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| ||| ||||| || || || || |||||||||||| ||||||||| ||| ||||||| Sbjct 2107046 TCCTCTGAAAGGTCCCATCCAGCGCAGCCACGATGACGGTCTTCCCCGAGTTGGCCATGT 2107105 Query 43927 CCTCGCAGAACTCCACTAGGTC 43948 ||||||||||||||| | ||| Sbjct 2107106 TCTCGCAGAACTCCACAATGTC 2107127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475951991119320