Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_022968.1 Length=148567 Score E Sequences producing significant alignments: (Bits) Value seq7352 82.4 7e-11 >seq7352 Length=278960 Score = 82.4 bits (90), Expect = 7e-11 Identities = 67/80 (84%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 60776 TGGTCGGAGCGGCAGGATTCGAACCTGCGACCCAGTGCATCCAAGGCACCCACGCTGACC 60835 ||||||||||||||||||| ||||||||||||| ||| |||| || |||| ||| Sbjct 263590 TGGTCGGAGCGGCAGGATTTGAACCTGCGACCCTCTGCTCCCAAAACAGATGCGCT-ACC 263648 Query 60836 AGACTGCGCTACGCTCCGAA 60855 || ||||||||||||||||| Sbjct 263649 AGGCTGCGCTACGCTCCGAA 263668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475196933276280