Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq14388 86.0 1e-11
>seq14388
Length=1089484
Score = 86.0 bits (94), Expect = 1e-11
Identities = 250/362 (69%), Gaps = 35/362 (10%)
Strand=Plus/Minus
Query 107225 ttatatcatataat-tgtatatcatatttttcaacattaataatgttatgtcta-tatat 107282
|||||| ||||| | | || || |||| |||| | | || ||| | | | || |||||
Sbjct 808591 TTATATAATATATTATATAAAT-ATATATTTCTATAATATAAATTTATTATATAATATAT 808533
Query 107283 tgatatatgtaaatttttatctaatat-----tagtatttcat-tataat-taaatatat 107335
| ||||| || || ||| | |||||| || ||| | || ||| || |||||||||
Sbjct 808532 T-ATATAAATATATATTTCTATAATATAAATTTATTATATAATATATTATATAAATATAT 808474
Query 107336 ttttgtataatattggctgtaatttattaaatattaaattatcatctatttCTAAGGTAT 107395
||| |||||||| | || | ||| | |||||| || | || |||||||| |||
Sbjct 808473 ATTTCTATAATATAAATT-TATTATATAATATATTATATAAATATATATTTCTATAATAT 808415
Query 107396 CATCTT-TGatataataaattatataaagtattaattcatttctcattcgaatattatta 107454
| || | |||||||| |||||||||| ||| ||| | | | || ||| ||||||
Sbjct 808414 AAATTTATTATATAATATATTATATAAA-TATATATT--TCTATAATATAAAT-TTATTA 808359
Query 107455 -ataatatttaaat---atatagatt-ctggcatataatctttatgtgataatatacatc 107509
||||||| ||||| ||||| ||| || |||||| ||||| ||| || ||||
Sbjct 808358 TATAATATATAAATTAAATATATATTTCTATAATATAAA-TTTATTATATA-TAAACAT- 808302
Query 107510 taatatatgatataGATGGATTTTCATTTAGAAATTTATTTATTTTATAATATATTGAAT 107569
|||||| | | ||| | || || | || ||||||| ||||||||||| ||
Sbjct 808301 ----ATATGA-ACATATGAGT----ATATA-ATATAAATTTATTATATAATATATTATAT 808252
Query 107570 AA 107571
||
Sbjct 808251 AA 808250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786018414002280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |