Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_023498.1 Length=62466 Score E Sequences producing significant alignments: (Bits) Value seq12126 111 6e-20 >seq12126 Length=13531 Score = 111 bits (122), Expect = 6e-20 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 56528 CATCACAACTACACGCAGAAGGAGCTGCACGGCGGCCGTGAGGTGTGGTTGACCCGCAAG 56587 |||||||||||| |||||||||| |||| ||||| || || | |||| |||||| Sbjct 5617 CATCACAACTACGTGCAGAAGGAGACGCACCACGGCCAGGAACTGCTGGTGACGCGCAAG 5558 Query 56588 GGTGCGATCGACGCGCACGAGGGTGTGCGGGGCCTGATTCCCGGCAGCATGGGCACTTGC 56647 || ||| || ||||| |||||| | || |||| | |||||||||||||||||||| || Sbjct 5557 GGCGCGGTCAGCGCGCGCGAGGGCGAGCTGGGCATCATTCCCGGCAGCATGGGCACGCGC 5498 Query 56648 TCGTATGTCGTGACGGGCAAGGGCAA 56673 || ||||| ||||||||||| Sbjct 5497 AGCTACATCGTGCGTGGCAAGGGCAA 5472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199729736560473