Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_023572.1 Length=42240 Score E Sequences producing significant alignments: (Bits) Value seq11405 100 8e-17 >seq11405 Length=110570 Score = 100 bits (110), Expect = 8e-17 Identities = 99/126 (79%), Gaps = 8/126 (6%) Strand=Plus/Minus Query 36959 GACTGGGTGATCGTCGGCGGTGAATCCGGGCCCGGCGCCCGGCCAATGCACCCCGATTGG 37018 |||||||||||||||||||| || ||| ||||| || || || ||||| ||||| ||| Sbjct 75391 GACTGGGTGATCGTCGGCGGCGAGAGCGGCCCCGGTGCGCGTCCCATGCATCCCGACTGG 75332 Query 37019 GCGCGAACGCTGCGCGACCAGTGCACGGTGGCCGGTGTGC----CGTTCCTGTTCAAGCA 37074 |||| | ||||||||||||||| | ||||| || || | ||| |||||||||| Sbjct 75331 GCGCTCAGCCTGCGCGACCAGTGC---GAGGCCG-TGGGCACGGCCTTCATGTTCAAGCA 75276 Query 37075 GTGGGG 37080 |||||| Sbjct 75275 GTGGGG 75270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135022250243116