Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_023579.1 Length=75568 Score E Sequences producing significant alignments: (Bits) Value seq15007 82.4 4e-11 >seq15007 Length=612 Score = 82.4 bits (90), Expect = 4e-11 Identities = 67/80 (84%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 41783 TTCAGGTCGTTAGCTCAGTTGGTTAGAGCACCGGACTTTTAATCCGGTTGTCATTGGTTC 41842 ||| ||||||||||||||||||| |||||| ||||||||||||||| | ||| ||||| Sbjct 246 TTCGGGTCGTTAGCTCAGTTGGT-AGAGCAGCGGACTTTTAATCCGTTGGTCGCAGGTTC 304 Query 41843 GAGGCCAATACGACCTACCA 41862 ||| || ||| ||||||| Sbjct 305 GAGTCCCGCACGGCCTACCA 324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241648441742771