Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_023581.1
Length=77792
Score E
Sequences producing significant alignments: (Bits) Value
seq11739 181 5e-41
>seq11739
Length=237542
Score = 181 bits (200), Expect = 5e-41
Identities = 216/293 (74%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 37819 TGGCTTTGATCAGATTGATTGGGTTATTAATGAAATTAAAACTAACCCTACATCACGCCG 37878
||| ||||| || || |||| | | |||||||| || || || || | ||||| ||
Sbjct 9110 TGGTTTTGACCAAATCAGTTGGTTGGTCAATGAAATCAAGACCAATCCAAACTCACGTCG 9051
Query 37879 TCTAATTGTCAATGGATGGAATCCACATGAAGTAGATAAGGCAGCATTGCCACCTTGTCA 37938
| | ||||| ||| ||||| ||| |||||| || ||| | || || || || || ||
Sbjct 9050 TTTGATTGTGTCTGGCTGGAACCCAAATGAAGCAGGTAAAGTTGCCTTACCGCCATGCCA 8991
Query 37939 TACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGTCAGTTATATCAACGTAG 37998
|| || ||||| || ||||| || ||||||| | || || | |||||||||||
Sbjct 8990 CACTTTATTCCAATTTTTTGTTCAGGATGGAAAGTTGTCTTGCCAACTTTATCAACGTAG 8931
Query 37999 TGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCGTTGCTTACACATAT 38058
||| ||| | |||||||| || |||||||||||||| |||||||| | || || |||||
Sbjct 8930 TGCAGATGTTTTCTTAGGGGTGCCATTTAATATTGCCAGCTATGCTCTACTGACTCATAT 8871
Query 38059 CGTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTCTGGACTGGTGGTG 38111
|| ||| || ||||| |||| || ||||| |||||||||||||| ||||
Sbjct 8870 GGTTGCTCAAGTTTGTGGTTTAGGCGTAGGTGATTTTGTCTGGACTGGCGGTG 8818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 248763935585347
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |