Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_023588.1 Length=33525 Score E Sequences producing significant alignments: (Bits) Value seq7272 338 1e-88 seq10554 187 5e-43 seq13794 109 1e-19 seq5906 100 6e-17 >seq7272 Length=98981 Score = 338 bits (374), Expect = 1e-88 Identities = 839/1255 (67%), Gaps = 50/1255 (4%) Strand=Plus/Minus Query 16193 CCGGCATGCAGGCGCTGCTGGTGGCTGAGGCGCAGGTAGGCGTGCGTCCGCGCATCCTCG 16252 ||||||| ||||||||| | || || |||| | |||||| || |||||||| | Sbjct 25599 CCGGCATTCAGGCGCTGATCACCGCGCAGCAGCAGCTGGGCGTGAAACCCCGCATCCTGG 25540 Query 16253 GCGCACCCGGTCTGGACACCCAGCCGGTTTCGGCCGCACTGGCGGTCATCGCCAAGAAGC 16312 |||| ||||| ||||||||| |||| || ||| || || ||| | ||||| ||| Sbjct 25539 GCGCCCCCGGGCTGGACACCAAGCCCGTGGCGGATGCCCTCACGGCCGCCGCCATCCAGC 25480 Query 16313 TGCGCGCGATGGCCTACGTG-AGCTGTGC-CGCCAGTGCCTCGGTCAGCGAGGCCATCGC 16370 ||||||| |||||||||||| || | || || | | | || ||||||||| | || Sbjct 25479 TGCGCGCCATGGCCTACGTGCAG--GGGCACGGCGCCGACGATGTGAGCGAGGCCCTGGC 25422 Query 16371 CTATCGCGAGCAGTT-CAGCCAGCGCGAGCTGATGCTGATCTATCCCGACTTCGTCGCGT 16429 ||| || | |||| | || ||||| ||| |||||| ||||| ||| || | Sbjct 25421 GTAT-GCAGGGAGTTTCGGCGCCCGCGAAACCATGGTGATCTGGCCCGATTTCAAAGCCT 25363 Query 16430 TCAACACTGCCGACGCCACCACCAGCATGGCGTTCGCGACCGCCCGCGCCCTGGGCCTGC 16489 ||||| | | || ||| || ||| || ||| ||| |||| |||| Sbjct 25362 GGAACACCACGGCAAACAAGGCCATCAATGCGCCGGCTGTGGCCTACGCGATGGGGCTGC 25303 Query 16490 GCGCGATGATCGATGAGCAGCAGGGCTGGCACAAATCGATCTCCAATGTGGCCGTCGCCG 16549 |||| ||||| | | |||| || |||||||| | | || || ||| | | | Sbjct 25302 GCGCCCGCATCGACGTGGAGCAAGGTTGGCACAAGACCCTGTCAAACGTGCCGCTAAATG 25243 Query 16550 GCGTGACCGGCATCAGCCGCGACGTGCACTGGGACCTGCAAGATCCGGCGACCGACGCTG 16609 || | ||||||||| |||||||| | ||||||||| ||| ||| ||||| Sbjct 25242 GCCCGGTGGGCATCAGCAAGGACGTGCATTTCGACCTGCAAAGCTCGGAGACGGACGCAA 25183 Query 16610 GCCTGCTGAACGCCGCCGACATCACCACCCTCATCAACTCCAACGGTTACAAGTTCTGGG 16669 |||||| || | | | || ||||||| |||||||||| | | || || ||||||| Sbjct 25182 ACCTGCTCAATGAGGGCAACGTCACCACGCTCATCAACTACCAGGGCTATCGCTTCTGGG 25123 Query 16670 GTTCGCGGACCTGCAGCGACGACCCGCTGTTCGCCTTCGAGACGGCCACGCGCACCGCGC 16729 | ||||| ||||||||| |||| |||||| |||||| | | |||||| || | Sbjct 25122 GATCGCGCACCTGCAGCACCGACGAACTGTTCCGATTCGAGTCCAGCGTGCGCACTGCCC 25063 Query 16730 AGATCCTGGCCGACACCATTGCCGAGGCGCAGATGGTGTACATCGACAAGCCCGAGCATC 16789 || | |||||||||||||| || |||| || | | | ||||||||||| ||| | Sbjct 25062 AGGTGCTGGCCGACACCATGGCAGAGGGTCATTTCGCCTTTGTCGACAAGCCCATGCACC 25003 Query 16790 CGTCGCTCATCCGCGACATGCTGGAGAGCATCAATGCCAAGTTCCGCGAGCTGGTGAACG 16849 | | | ||||| |||| |||||||||||||||||||||| | | || | Sbjct 25002 CCAGCATGGTGAAAGACATCGTGGAAGGCATCAATGCCAAGTTCCGCGAAC---TCAAGG 24946 Query 16850 CC---GGCTACGT----GGCTG--GTGCATCGCTGTACGACGAGCGGCCAACGAGCCCAG 16900 || |||||| | | | | | || | | | ||| ||| || |||| | | ||| Sbjct 24945 CCCTGGGCTACATCCTCGACGGCCGCGCCTGGTTTGACGCCGA--GGTCAAC-ACCACAG 24889 Query 16901 -CCAGCT-GAGGCTGG---GGTGACAATCGACTACGACTACACGCCGGTACGCCCGCTGG 16955 ||| |||| || | || | ||||||||||||||||| || | ||||||| Sbjct 24888 AAGCGCTCAAGGCCGGCAAGCTGGTGCTTGACTACGACTACACGCCCGTGCCGCCGCTGG 24829 Query 16956 AGAACCTGGTCCTGAACCAGCGCATCACCGACCGCTACTTCGCCGACTTC---------- 17005 | |||||| | ||||||||||||||||||||| |||| ||||||| Sbjct 24828 AAGACCTGGGATTCCGCCAGCGCATCACCGACCGCTATTTCGGCGACTTCGCCATGCGCG 24769 Query 17006 ------CCGGCC-GTATCAACGGCTG-ATGCC-GTACTGAGGA-ACCATTCCCATGTCCA 17055 |||||| ||| |||| | || || | || |||| | | ||||| Sbjct 24768 TGGGCACCGGCCAGTAAGCCCGGCCGCATTCCAGCACACAGGAGATCCACACCATGGGAC 24709 Query 17056 TGCCCAGCAAGCTCAAGAA--TCTCAACCTGTTCAACGACGGCCTCAGCTACCTGGGCCA 17113 ||||| |||| |||||||| || | ||| |||| ||||||| | | |||| ||||| | Sbjct 24708 TGCCCCGCAAACTCAAGAACTTCGCCACC--TTCATCGACGGCGTGAACTACATGGGCGA 24651 Query 17114 GGTCACCGAGGTCAAGCTGCCGACCTTGACCCGCAAGATGGAGGAATACCGCGCCGGCGG 17173 | |||| |||| || || ||| | ||||||||||||||||||||||| || || || Sbjct 24650 AATGCCCGAAGTCACCCTCCCCACCCTCACCCGCAAGATGGAGGAATACCGGGCGGGTGG 24591 Query 17174 CATGCTCGGTCCCATCGATATTGACCTCGGCCAAGAGAAAATCGAACTGGAATGGAAGTG 17233 |||| || |||||||| || || | |||| || ||||| ||| || || Sbjct 24590 CATGAATGGCCCCATCGAGATGGATATGGGCCTGGAAAAAATGGAAGCCGAGCTCAAAAC 24531 Query 17234 TGGCGGACTGATGCGCGACGTGCTGCGCCAGTACGGCGCCATCGCCCACAACGCCGTGCA 17293 ||||| ||| ||| | || || | || || | ||| ||||||||| Sbjct 24530 GGGCGGCTATATGAAAGACCTCATGAAGCAATGGGGTGCGGCCAAGCACGACGCCGTGCT 24471 Query 17294 GCTGCGATTCGCTGGCGCCTATCAGCGCGAAGACAGCGCAGACGTGGACTCGGTCGAGAT 17353 |||||| ||| | ||| ||| ||| ||| ||||||| || |||||| | || || | Sbjct 24470 GCTGCGCTTCACAGGCTCCTTGCAGACCGACGACAGCGAAGCCGTGGAGGCCGTGGAAGT 24411 Query 17354 CGTCATCCGCGGCCGTCACAGCGAGATCGACGCCGGCACCGGCAAGGTCGGTGAC 17408 |||||| ||||| || | | |||| |||| |||||| | ||||| ||| ||| Sbjct 24410 CGTCATGCGCGGGCGCCTGACCGAGCGCGACCCCGGCAGCTCCAAGGCCGGCGAC 24356 Score = 334 bits (370), Expect = 2e-87 Identities = 720/1064 (68%), Gaps = 27/1064 (3%) Strand=Plus/Minus Query 3072 GCTTTCAGCACCAGCCGCGTTTTCACCTCGGGCGAGTAGTTGAA-GACGGTCACGCCGGG 3130 || |||| |||||| |||||||| ||||| ||| | || ||| |||| | || Sbjct 42137 GCCTTCATCACCAGGCGCGTTTTGACCTCCACGCTGTACTGCAATGACT-TCACAGCCGG 42079 Query 3131 GAAGAACTGGCGCACCAGCTGTGCAACGCCGGTGCCCATGCCGGTCGCATCCACGCCGAT 3190 |||||||| ||| | ||| ||||| ||||| || || | ||| | || ||| Sbjct 42078 GAAGAACTTTTTCACGATCTGCAGGACGCCCTGGCCCAGACCTGTGGAATCAATGCAGAT 42019 Query 3191 GTAGGTCACCCAATAGCGCTTGGTGATCTGCTCGATGAACGCGGCCTGGTCCTTGAACTC 3250 || | ||| || || || ||||| ||||| ||||||| | | || || Sbjct 42018 GTGTGCCACGTTGTATTTCTCTGTCATCTGGCGGATGACTTCGGCCTGCGCTTCAAAGTC 41959 Query 3251 CATGCCCTTGAACTGATGGCGTTCCAGCACGCGGAACTTGCCGCAGGGCACCAGCGGCGG 3310 | ||||||||||| ||| ||||||| |||||||||||||| ||| ||||| Sbjct 41958 CGCTCCCTTGAACTGCATGCGCTCCAGCATGCGGAACTTGCCGCCCGGCTTTTCTGGCGG 41899 Query 3311 GGCTACCACCACGATGCCCGCGCTGTCGCCGGTCTCGGCCGGGTCGTAGCCGATCCACAC 3370 ||| | ||| || | |||||| |||||| || | | ||||| ||||| ||||| || Sbjct 41898 GGCCAGCACTACAAGGCCCGCCGAGTCGCCCGTATGGCTGGGGTCATAGCCAATCCAGAC 41839 Query 3371 AGCGCGGTCGCCGTAGGGCCGGACGGCAAACGGCTTGTAGTCGTCCGCCCACTCGACCCA 3430 | | ||| | ||||| | | || |||||| | ||| |||| | |||| Sbjct 41838 GGGCTTTTGGCCAAACGGCCGCAACGTGAAGGGCTTGAAATCG---CTCCACGCATCCCA 41782 Query 3431 GCTATCGACCTGACAGGGCTGCAGCATCGTGAGCGGGAATACGCTGGCGCTGTCATCCAC 3490 ||| || | || ||| || |||| | | |||||||| || | | ||||||| || Sbjct 41781 GCTGTCCGCATGGCAGCGCATCAGCGTGGACAGCGGGAAAACAGCGAAGGTGTCATCGAC 41722 Query 3491 GAACTCGCACATCAGCAGATTGGCGAATTCCTCGGCGCTGTAGTCGCGGCGCAGTTCCTC 3550 ||| ||||||| ||||| ||| | |||||||| | || ||| ||||||||| || Sbjct 41721 AAACCCGCACATGAGCAGGTTGTCCCATTCCTCGTCCGAATACTCGAAGCGCAGTTCGTC 41662 Query 3551 GATATCGAACAGGTCACAGCCACGGCCGGCCGCATCAAGAACGGTCACGATCTGGCGCCA 3610 | |||||||| | ||||| | || |||||| || || || || ||||| ||||| Sbjct 41661 AAGGTCGAACAGATTGCAGCCGCCGCGCTGCGCATCCAGCACCGTGACAATCTGCCGCCA 41602 Query 3611 GATCGCGTCCTCGCAACGCCG--GCCACCCATCAGGCGCGCGTGGCTCACATCCAGCTGG 3668 ||| |||||||| || | ||| || |||| ||| ||||||| ||||||| Sbjct 41601 TATCTTGTCCTCGC--CGGTGAAGCCTCCAGCCAGGTGCGAATGGCTCAGGTCCAGCTCT 41544 Query 3669 ATCTGCTGGGACACCGAGCGTCCCTTGTTGAAGCGCTCGCCGGTCCAGAAGTCGAAGGCT 3728 || | | | ||| |||||||| ||| ||| || |||| | | |||| Sbjct 41543 ATGCGGTCCTTTTTGGCGCGCTTCTTGTTGATGCGTTCGGCGCTCCACAGCGCATAGGCC 41484 Query 3729 TCATGCGCCATGGTGGACGGCGTGCTGAAGTAGGTCTTGCGCCACTTCTTGTGCATCGCC 3788 | ||| || | || |||||| || ||||||||||| | |||||| || ||| Sbjct 41483 TGGTGCTGCAGGCTGCTGGGCGTGGAAAACAGCGTCTTGCGCCAATGCTTGTGGATGGCC 41424 Query 3789 ATGCCGCTGGCGACCTTGTTCAGCTGGTTGAAACCGTAGGTCCAGAAGAACTCGTCAAAG 3848 || |||||||| ||||| ||||| |||| || | ||| ||||| || || || Sbjct 41423 ATACCGCTGGCCACCTTCCACAGCTCCGTGAAGTTGTTGACCCAAAAGAATTCATCGAAA 41364 Query 3849 TAGAAATTGCCGTGGTAGCCCTGTGCGGTGCGGGCGTTGGTGCCCAGGAAGAACAGCTCG 3908 |||| |||||||||||| ||| |||||||||||| | ||||||||||| ||||| | Sbjct 41363 TAGAGATTGCCGTGGTACGACTGCGCGGTGCGGGCGCTCGTGCCCAGGAAATACAGCGTG 41304 Query 3909 GCGCCATTGGCCAGGGTGATCGGGTCGCCGGTCAGGTCACGGTC-CA--GCACCT---CA 3962 ||||||||| |||| ||| |||||||| ||| || || || || ||| || Sbjct 41303 GCGCCATTGCTCAGGACGATGGGGTCGCCCTTCAAATCGATATCGCAATGCTCCTTGGCA 41244 Query 3963 CGCACGAAGCCCCGCATATA--GCCGAGGAAGATGTGCGCTTGGCTCTTGGAT-GCGCTC 4019 | ||| | || || |||| || ||| || || || | || | || Sbjct 41243 AACGCGATG------ATGTACTGCCGGAAAACATGGGC-CT--GCGCACGGCTGGCCGAA 41193 Query 4020 AGGAAAATCTGGTTGCGGCCGGTGGTCAGCGCGTCGATCAGCGCCTCGCGGGCGAAGTAG 4079 || |||||||| |||||||| || |||| || || ||||| ||||||||| ||||||| Sbjct 41192 AGAAAAATCTGATTGCGGCCCGTCTTCAGGGCATCAATCAGGGCCTCGCGGCCGAAGTAC 41133 Query 4080 TAGGTGGCACCGATCTGGCGCGACTTCAGGATGATGCGCGTGCG 4123 | || || |||||||||||||| || || ||| ||||||||| Sbjct 41132 CACGTTGCCCCGATCTGGCGCGATTTGAGAATGGCGCGCGTGCG 41089 Score = 156 bits (172), Expect = 9e-34 Identities = 260/372 (70%), Gaps = 8/372 (2%) Strand=Plus/Minus Query 1977 GGCACGATGCCCAGCAGCTGCGGCGGTACCCGTAACGCGGCCAGCATGTCATCGCGGGTC 2036 ||||| | ||||| |||||||| || || || ||||||| |||||||||| || Sbjct 43240 GGCACCACGCCCATGAGCTGCGGAGGCACGCGGTGGGCGGCCAATTGGTCATCGCGGCTC 43181 Query 2037 ACGCTCTTGATGCCGGTGAATTCATCCCTTGCCGCCACCTCACTGACCGGGATCACCTGC 2096 ||| |||||||| | ||||||||| | |||||| |||| | || || | || || Sbjct 43180 ACGTTCTTGATGTTGAAAAATTCATCCTTGGCCGCCGCCTCGCCGATGGGCAGCAGTTGG 43121 Query 2097 AGGCCGTCCTTCTTCCCGTTGGGCGAGTGAACGAACAGGTTCTTGAAATTGCCCG-GCCC 2155 | | | | || || ||| |||||| || | ||||| || |||||||||| |||| Sbjct 43120 ATGGCTTTCTCTTTGCCGCCGGGCGAATGGAAAAACAGATTGCGGAAATTGCCCATGCCC 43061 Query 2156 GCGCGACTGCCGCAGTGCGTCGCGTAACGCATCCAC---GTCCATGCCCTCGGGTTGGGG 2212 | || || || | ||| | ||||||||| ||| | || | || ||| Sbjct 43060 TTG-GAAGATTTCAAGGCCTGGCGCAGCGCATCCACATCGTCTTTTGCCAC---TTCGGG 43005 Query 2213 ATCGGTCATGTAGAGGATGTAGCCGGCGTGCGAACCGTTGTTGTAATACTTCCGGCGGAA 2272 |||| ||| ||||||||||| ||||| || || |||||||||||| || || || Sbjct 43004 ATCGCTCAGATAGAGGATGTATCCGGCATGGCTCCCATTGTTGTAATACCGGCGCCGAAA 42945 Query 2273 AAGCGTGGCCGACTCATTCAGCAACGCGGCCTGTACGGCTGGCATCCATTCCGGCAGGCC 2332 ||||||||||||||||| ||| | |||| ||| | || | || | | |||||| || Sbjct 42944 CAGCGTGGCCGACTCATTGAGCCAGGCGGACTGCAGCGCGGCCAGGTACTGCGGCAGTCC 42885 Query 2333 GTAGATTTCCTG 2344 ||||||||||| Sbjct 42884 ATAGATTTCCTG 42873 Score = 145 bits (160), Expect = 2e-30 Identities = 326/482 (68%), Gaps = 32/482 (7%) Strand=Plus/Minus Query 4773 TCCGAGTTCTTTCGTGTTGCCGTCGAAGGCGCCACCACCGATGGCCG----AGTGATCGA 4828 ||| |||| || || || || ||||| ||||| || |||||||| | | ||| Sbjct 40369 TCCAAGTTGTTCCGCGTGGCTACTGAAGGTGCCACTACTGATGGCCGCACCATTTCTCGG 40310 Query 4829 GCGTCAGCAGATCGCGGACATCGC-CGAAACCTACGACCCGGAGGTGTACGGCGCACGCA 4887 |||| ||||| | | || || || ||| | ||||||| || |||| ||| || Sbjct 40309 GCGTG----GATCGAGCAAATGGCTCGCAACTT-CGACCCGAAGAAATACGCCGCCCGTG 40255 Query 4888 TCTGGCTGGAACACTTCCGCAGCACGCTGCCGGACAGCCCGTTCCGCGCCTATGGCGACG 4947 ||||| | || ||| | ||| || |||||| |||||| |||| |||| | ||||||| Sbjct 40254 TCTGGATCGAGCACATGCGCGGCCTGCTGCCTGACAGCTCGTTTGCCGCCCAGGGCGACG 40195 Query 4948 TGCTGGCGGTGAAGGCCGAGGAAGTCGAAATTGCCGGCAAGAAGAAGCTGGCGCTCTTCG 5007 |||| | ||| ||||| || | | | | | ||||||| || ||||| | | Sbjct 40194 TGCTTTCCGTGCAGGCCAAGCAGGAGGCA---GACGGCAAG------CTCGCGCTGTATG 40144 Query 5008 CCCAGGTCGAGCCGACCGACGACCTGGTCGACATGGTCAACGTGCGCAAG---CAGAAGG 5064 | ||| | |||| ||| ||| ||| ||| |||| | ||| |||||| Sbjct 40143 CGCAGATTCAGCCCCTGGACTCTCTGATCGCCAT---CAACCAG---AAGGGCCAGAAGC 40090 Query 5065 TCTTTACCAGCATCGAGATTTCCCCGGAGTTCGCCGACAGCGGCAAGGCGTACCTGTTCG 5124 ||| |||| ||||||| | ||| || ||||| | | ||| |||| || || ||| Sbjct 40089 TCTATACCTCCATCGAGGTGGACCCCGATTTCGCGGGCTCCGGAGAGGCCTATATGGTCG 40030 Query 5125 GCCTGGCCGTGACCGACTCCCCCGCCAGCCTGGGCACCAGCATGCTCGCGTTCTCGGCCC 5184 |||||||||| |||||| | || ||||||||||||||| ||||| ||| | || | Sbjct 40029 GCCTGGCCGTCACCGACACGCCGGCCAGCCTGGGCACCGAGATGCTGCAGTTTGCCGCGC 39970 Query 5185 AGCACCCGGAGAGCAGCCCGCTCAAGGACCGCAAG--CAGGCCCCGGAGAACCTGTTCAC 5242 |||| || | | ||||||||| | ||||||| || | |||| ||||| ||||| Sbjct 39969 AGCATCCCAACACCAGCCCGCTGGCCGGCCGCAAGATCAAG--CCGGGCAACCTCTTCAC 39912 Query 5243 CG 5244 || Sbjct 39911 CG 39910 Score = 138 bits (152), Expect = 2e-28 Identities = 602/931 (65%), Gaps = 45/931 (5%) Strand=Plus/Minus Query 5737 GCCGACTGTGCAGCAGAGCCTCGAAGCCCGCATGCAGGAAAGCAGTACCTTCCTGCAGGC 5796 |||||| |||||||||| || ||| |||||||||||||| ||| | |||||| || | Sbjct 39386 GCCGACCGTGCAGCAGAAGCTGGAAACCCGCATGCAGGAATCGAGTTCATTCCTGAAGTC 39327 Query 5797 GATCAACATGGTCGGCGTGAACGAACTGAAGGGCCAGAAGGTTGGCGTTGGCATCACCGG 5856 |||||||| | |||| | | ||||| | ||||| || | || | ||| | Sbjct 39326 CATCAACATCCTGCCCGTGGTGCCGCAGCAGGGCGAAAAGGTGGGTCTGAGCCTGACCCG 39267 Query 5857 CACCATTGCCGGCCGCACCGACACCAGCGGCAACGGCGAGCGCAATCCGTCCGATCCGAC 5916 || | ||| ||||||| ||||||| || ||||| ||||| | |||||||| Sbjct 39266 TCCCGTCGCCAGCCGCACGGACACCACCGCTGACGGCCCCCGCAAGACCAAAGATCCGAC 39207 Query 5917 CTCGCTGGTGTCCAACACC---TACGAGTGCCAGAAGACCGACTTTGACACCGCCCTGCC 5973 || ||| ||| ||| | |||| | ||| || | || ||| | | Sbjct 39206 AGGCAAGGA---CAAGACCGGATACCACTGCCTGCAGATTGATTCCGATACCCACATCAA 39150 Query 5974 CTATGCCCGCCTGGACGCCTGGGCGCATCGCCCCGAGTTCCAGACCCTGATCCGCGACGC 6033 || || || || ||||||||||| |||||| || ||| | ||| ||||| Sbjct 39149 GTACGCGATGCTCGATGCCTGGGCGCACTTCCCCGACTTTCAGGTGCGTATCAGCGACCT 39090 Query 6034 GATCATCCAGCGCCAGGCACTGGACCGGATCATGATCGGCTGGCACGGCACCAGCATTGC 6093 ||| | | ||| | || |||||||| |||||| | || ||| |||||| || | || Sbjct 39089 GATTGCCGAACGCAATGCGCTGGACCGCATCATGGTGGGATGGAACGGCA--AGGAA-GC 39033 Query 6094 CAT---CAACACCGACCGCGTCGCCAATCCGATGCTGCAGGACGTGAACAAGGGCTGGCT 6150 || || |||| || |||||| || |||||||||| ||| |||||| ||||| Sbjct 39032 CAAGGCCACCACCAACTTGACCGCCAACCCTTTGCTGCAGGATCTGACCAAGGGGTGGCT 38973 Query 6151 GCAGAAGTACCGCGAGCATGCGCCCGAGCGCGTCATGACCGATGCGTCGATGGCAGCGGC 6210 |||| ||||| | |||||||||||||||||| | || | |||| ||| Sbjct 38972 GCAGCGCCTGCGCGAAGAGGCGCCCGAGCGCGTCATGTCTTCTGGCAAGGTGGC--GGGC 38915 Query 6211 AAGATCAAGGTGGGCGGTACC-GGCGCTGACTACGGGCAACATTGATGCCCTGGTGATGG 6269 ||| ||| ||||| ||| || | |||||| | ||| | || ||||||| |||| Sbjct 38914 AAGGTCACTGTGGG----ACCGGGTGGCGACTACAAG-AACCTCGACGCCCTGGCCATGG 38860 Query 6270 --GACTTG--GTCGCCAACATGATCGACCCGT-GCATCAGAAG-ATCCGAGCCTG-GTGT 6322 | | | |||| |||| || ||| ||| | ||| | ||| ||| | | Sbjct 38859 ATGCCAAGCACTCGC-----TGATTGATTCGTGGCACCGCAAGCACCCGGATCTGCGCGC 38805 Query 6323 GATCTGC-GCCGCCAGCTGGTGCACGACAAGTATTTCCCGATCATCAACCGTGACAACG- 6380 |||||| || | ||| |||| |||||| ||||| ||| | ||| |||||| Sbjct 38804 CATCTGCAGCGATGACCTGATGCATGACAAGCTGTTCCCCATCGTGAAC---AACAACGA 38748 Query 6381 --CCCCCACCGAGAAGGTCGCGGCCGAACTGATCCTGGGCGCCAAGCGCATCGGTGGCCT 6438 |||| |||| | |||||||| || | || || | |||| | || ||| Sbjct 38747 TCTGCCCAGCGAGCGCCTGGCGGCCGACATGGTGGTGAGCCAGATGCGCCTGGGCGGCAG 38688 Query 6439 GCAGCCGGTCATCGTGCCGTTCTTC-CCGGCCAAGTCGCTGATGGTGACCAGCCTC--AG 6495 ||| | || | |||||| |||||| || | | | ||| | | || ||||| | Sbjct 38687 CCAGGCCGTGACCGTGCCTTTCTTCATCGACGGTGGC-CTGCTCATCAC--GCCTCTGAA 38631 Query 6496 CAACCTGTCGCTGTACTGGCAGATTGCCTCGCGCCGCCGTCACATCATCGAGCAGCCGAA 6555 |||||||| | |||||||| | |||||||| ||||||||| | ||| Sbjct 38630 AAACCTGTCCATCTACTGGCAACGCGATGCGCGCCGCAAGGCCATCATCGACAACCCGTC 38571 Query 6556 CAAGAACCGCGTCGCCAACTTCGAGTCGTCCAATGATGACTACGTGGTGGAGGACTACGG 6615 || ||||| || | | ||| | ||||| || ||||| ||| | ||||| | ||| Sbjct 38570 CATGAACCAGGTGGACTTTTTCAACAGCTCCAACGACGACTATGTGATCGAGGATTTCGG 38511 Query 6616 TCTGGGCGCGGTGGCCGAGAACATCGAGTTC 6646 | |||| | | ||| |||||||| ||| Sbjct 38510 CGCGTGCGCCTTCGTCGAAAACATCGAATTC 38480 Score = 111 bits (122), Expect = 3e-20 Identities = 153/215 (71%), Gaps = 12/215 (6%) Strand=Plus/Minus Query 17680 TCACGCTCGACTACCCAATCCAGCGCGGCGAGCAGGTCATCGCCACGATCAAGCTGCGCA 17739 |||||||||| | || ||||||||||||| ||||| | | | ||||||| Sbjct 23985 TCACGCTCGAATCGCCCATCCAGCGCGGCGCCACCCACATCGAGCTGCTGCACCTGCGCA 23926 Query 17740 AGCCGAACGCCGGCGAACTGCGCGGCATCAAGCTGGTCGACCTGCTGCAGATCGACGTGA 17799 ||| ||||||| |||||||||||||| |||| ||| |||||| ||| || Sbjct 23925 GGCCCCTGGCCGGCGCCCTGCGCGGCATCAACCTGGCCGAGCTGCTG------GACCTGC 23872 Query 17800 GCGCCGTGGCCGCG------CTGCTGCCGCGCATCACCGAACCGACGCTGACAACTGCCG 17853 |||||| ||||| |||||||||||||||||||| ||| ||||||| | | | Sbjct 23871 GCGCCGAGGCCGTCATGGTCCTGCTGCCGCGCATCACCGAGCCGCCGCTGACCAAGCCGG 23812 Query 17854 ACGTGAACAAGCTGGACCCGGCCGACCTGGTCGCC 17888 | ||| | ||| ||||||| | ||||| || ||| Sbjct 23811 AGGTGGAAAAGATGGACCCCGTGGACCTCGTGGCC 23777 Score = 105 bits (116), Expect = 1e-18 Identities = 283/428 (66%), Gaps = 15/428 (4%) Strand=Plus/Minus Query 21850 GATGCGGTGGCCACGGTGAAAGCCGGCGCGCTGATCTTC--GCGCCCAT-CGGCGCCAGC 21906 || || ||||||||||| ||| || ||||||||| |||| || | || || | Sbjct 20077 GACGCCGTGGCCACGGTCAAAAAAGGGCAGCTGATCTTTCTGCGCACAAACAGCCGCACC 20018 Query 21907 AAGACAGCCAGCGGCCAGCCGCTTCCCGGTGTCCAGATCACTCGCGCATCCGGCGATCAA 21966 || |||||||||||||| | || | | || ||||| |||| | | ||||| ||| Sbjct 20017 AAC---GCCAGCGGCCAGCCCATCGCCCCTATGCACATCACGCGCGAAGCGGGCGACCAA 19961 Query 21967 CACCGCT---ACACCGTGGCTGACCGCGAGAAGTACACAGGCGTGCGCGCGTACTGGGGC 22023 ||||| | ||||| || |||||| || ||||| || |||||||| || ||| Sbjct 19960 CACCGATGGCACACC---GCAGACCGCACCAACTACACCGGGGTGCGCGCCTATTGGACT 19904 Query 22024 GACCGCAAGGCCGCACGCCGCACCGGCGTCCTGGTGGGCAC---GTCAGAGAACGAGAAA 22080 ||| ||||| ||| ||||||| ||||| |||| |||||| | | | | || || Sbjct 19903 GACGGCAAGCGCGCCCGCCGCAGGGGCGTGCTGGCGGGCACCAAGACGGGCAGCGTCAAG 19844 Query 22081 AGGCTGCAGCCCACGTATGCCACTGCGGAGGAAGCGCGCCAGCATGCTGAGGCAGAGTTC 22140 | |||| | ||| | |||| || |||| ||||||||| || | | ||| | Sbjct 19843 ACGCTGAAAGACACCTTCGCCAGCGCCGAGGCCGCGCGCCAGGCCGCGCAATCGGAGATG 19784 Query 22141 AAACGGCTTGATCGCGGCACCGCCCAGCTCAGCTACCGCCTCGCACTCGGGCGCGCCGAT 22200 | || | || || ||| ||||| || ||| ||| || || || || || | Sbjct 19783 CAGCGCGTGGACCGTGGCGCCGCCACCCTGAGCCTGGCCCTGGCCCTGGGCCGGCCCCAC 19724 Query 22201 ATCTACCCAGAGCAAACCGTGACGGTGAGCGGCTTCAAACCGGAAATTGATGGCACCGAT 22260 || || || ||||||| ||| ||||||||||| || ||||| ||| | Sbjct 19723 CTCATGCCGCAGGCGGCCGTGACCGTGGAGGGCTTCAAACCCGAGATTGACGGCGAGGGC 19664 Query 22261 TGGCTGGT 22268 |||||||| Sbjct 19663 TGGCTGGT 19656 Score = 102 bits (112), Expect = 2e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 15533 GGCGCACCTGCGGCAGTCCATTGCCGACATTCTTACTACTCCCATCGGCTCGCGCATCCA 15592 || ||| ||||| || ||||||| |||||| || | || ||||||||| ||||| || Sbjct 33205 GGAGCATCTGCGCCAATCCATTGGCGACATCCTGGCCACGCCCATCGGCACGCGCGTCAT 33146 Query 15593 GCGCCGCGACTACGGCTCGCTGCTGCCTGAGCTGATCGACCAGCCGTTCAACGAAGCCAC 15652 ||||||||| ||||||||||| |||| | |||| | |||||||| |||| |||| Sbjct 33145 GCGCCGCGATTACGGCTCGCTTGTGCCCGCGCTGGTGGACCAGCCCGACAACCGCACCAC 33086 Query 15653 GCGGTTGCGTCTTTATGGCGCTACTGCAACGGCGCTGATGCGTTGGGAGCCGCGCCTGC 15711 | || || ||| | || | || |||||||| |||||||||||||||| Sbjct 33085 TGAAATCCGCCTGCTGTCCGCCGCCGCCAGTGCCCTGATGCGCTGGGAGCCGCGCCTGC 33027 >seq10554 Length=25488 Score = 187 bits (206), Expect = 5e-43 Identities = 174/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 32612 CAACCTGTTCGCCCGCACCGCCTCTCGATAGGCCTCGATCTTGGCCACATCCTCGCGCAG 32671 || || |||| |||| ||| ||| | | | | |||||||||||||||||| ||||| Sbjct 6719 CAGCCGGTTCCCCCGGACCTTCTCCTGCCATGTCAGGATCTTGGCCACATCCTCCCGCAG 6660 Query 32672 GCGGGTCTCGTGCCTGGTCACCCACATCTCAGCGCCGGCGCGGCCCTGCTCGTAACTGCT 32731 | | ||||||||||| |||||||| ||| || || || |||||||||||||| |||| Sbjct 6659 CCTGTCCTCGTGCCTGGCCACCCACAGCTCGGCCCCTGCCCGGCCCTGCTCGTAGTTGCT 6600 Query 32732 ACACCGGCGGGACGGCCCGCCGGGACCATGCCGATGCCGGTCGAGACTGGCAATCCAGAT 32791 |||| ||| ||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct 6599 GCACCAACGGAACGGCCCGCCGGGGCCATGCCGATGCCGGTCCAGCGAGGCGATCCAGAT 6540 Query 32792 CCCATCGTTCACCCGTCGTAGCAGTACGACCACCCACACGC 32832 ||| ||||||||||| | || | ||||||||||||| Sbjct 6539 CCCGTCGTTCACCCGCTGGGCCATAGCCACCACCCACACGC 6499 Score = 109 bits (120), Expect = 1e-19 Identities = 120/157 (76%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 32579 CCAGCCGAAAGGCGGCTCGATGTGCAGC-TTCTTCAACCTGTTCGCCCGCACCGCCTCTC 32637 ||||||||||||||| || || |||| || || || |||| |||| ||| ||| Sbjct 6878 CCAGCCGAAAGGCGGATCCTGGT-CAGCCTTGCCCAGCCGGTTCCCCCGGACCTTCTCCT 6820 Query 32638 GATAGGCCTCGATCTTGGCCACATCCTCGCGCAGGCGGGTCTCGTGCCTGGTCACCCACA 32697 | | | | |||||||||||||||||| ||||| | | ||||||||||| |||||||| Sbjct 6819 GCCATGTCAGGATCTTGGCCACATCCTCCCGCAGCCTGTCCTCGTGCCTGGCCACCCACA 6760 Query 32698 TCTCAGCGCCGGCGCGGCCCTGCTCGTAACTGCTACA 32734 ||| || || || |||||||||||||| |||| || Sbjct 6759 GCTCGGCCCCTGCCCGGCCCTGCTCGTAGTTGCTGCA 6723 >seq13794 Length=941 Score = 109 bits (120), Expect = 1e-19 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 5112 GCGTACCTGTTCGGCCTGGCCGTGACCGACTCCCCCGCCAGCCTGGGCACCAGCATGCTC 5171 || |||||| |||| | ||||| |||||| |||| ||||||||||||||| |||||| Sbjct 934 GCCTACCTGGACGGCATTGCCGTAACCGACACCCCAGCCAGCCTGGGCACCGAGATGCTC 875 Query 5172 GCGTTCTCGGCCCAGCACCCGGAGAGCAGCCCGCTCAAGGACCGCAAGCAGGCCCCGGAG 5231 | ||| |||||||| || || || ||| |||||| || || | | |||||| Sbjct 874 ACCTTCAGCGCCCAGCATCCCGACGCCAACCCACTCAAGTCGCGAAAAAATGACCCGGAC 815 Query 5232 AACCTGTTCACCGAGGCCACCGAGA 5256 ||||||||| ||||||||| ||||| Sbjct 814 AACCTGTTCTCCGAGGCCATCGAGA 790 >seq5906 Length=1255 Score = 100 bits (110), Expect = 6e-17 Identities = 242/362 (67%), Gaps = 7/362 (2%) Strand=Plus/Minus Query 15938 CCACCGCTATCGTCGGCGTCGTCTGCACCGCGCAGGACGCAGACGCCACGCTGTTCCCCC 15997 ||||||| ||| |||| | ||| || |||| ||||| || || | | ||||| | Sbjct 650 CCACCGCGATCATCGGTATGGTCGCCATCGCGGCCGACGCTGATCCCGCTATCTTCCCGC 591 Query 15998 TCGACCGACCGGTGCTGCTGACCGACGTGCTGGGCGCCGTCGGCAAGGCCGGCACCAGCG 16057 |||| || |||| ||| | ||||| || |||| ||||| ||||| || || Sbjct 590 TCGATCGCCCGGCGCTCATCACCGATGTTGAAACCGCCATCGGCGCCGCCGGGACGGACG 531 Query 16058 GCACGCTGCGCGCCACGCTGCAGGCCATTGCCGACCAGGCCAACGCCATTACCGTGGTGG 16117 |||||||| | |||||| ||||| ||||| || || | | || | || |||| Sbjct 530 GCACGCTGGCCCTGTCGCTGCGCGCCATCGCCGATCATGCTCGCCCGATCATTGTCGTGG 471 Query 16118 TGCGCGTCACCGAAGGTTCCGACGACAGCGCCA-CCACCGCCAACGTGATCGGCAAGAAG 16176 | ||||| ||||||| ||| | | ||| | || || ||| || ||||| | || Sbjct 470 TCCGCGTGGCCGAAGGGGACGATG-CGGCGGAAACCGCCAGCAATGTCATCGGTACGACC 412 Query 16177 GACGGC----GCCACCTTCACCGGCATGCAGGCGCTGCTGGTGGCTGAGGCGCAGGTAGG 16232 |||| | |||| || || |||||||||||||||| ||| |||||||| | || Sbjct 411 GACGCCAACGGCCAAAAG-ACAGGTATGCAGGCGCTGCTGGCGGCGCAGGCGCAGCTGGG 353 Query 16233 CGTGCGTCCGCGCATCCTCGGCGCACCCGGTCTGGACACCCAGCCGGTTTCGGCCGCACT 16292 || || ||||||| | | ||||| || || || ||| |||| || | || || Sbjct 352 GGTCAAGCCAAAGATCCTCGTCACCCCCGGCCTTGAAACGCAGGCGGTGACGACGGCGCT 293 Query 16293 GG 16294 || Sbjct 292 GG 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107139237332146