Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_023588.1
Length=33525
Score E
Sequences producing significant alignments: (Bits) Value
seq7272 338 1e-88
seq10554 187 5e-43
seq13794 109 1e-19
seq5906 100 6e-17
>seq7272
Length=98981
Score = 338 bits (374), Expect = 1e-88
Identities = 839/1255 (67%), Gaps = 50/1255 (4%)
Strand=Plus/Minus
Query 16193 CCGGCATGCAGGCGCTGCTGGTGGCTGAGGCGCAGGTAGGCGTGCGTCCGCGCATCCTCG 16252
||||||| ||||||||| | || || |||| | |||||| || |||||||| |
Sbjct 25599 CCGGCATTCAGGCGCTGATCACCGCGCAGCAGCAGCTGGGCGTGAAACCCCGCATCCTGG 25540
Query 16253 GCGCACCCGGTCTGGACACCCAGCCGGTTTCGGCCGCACTGGCGGTCATCGCCAAGAAGC 16312
|||| ||||| ||||||||| |||| || ||| || || ||| | ||||| |||
Sbjct 25539 GCGCCCCCGGGCTGGACACCAAGCCCGTGGCGGATGCCCTCACGGCCGCCGCCATCCAGC 25480
Query 16313 TGCGCGCGATGGCCTACGTG-AGCTGTGC-CGCCAGTGCCTCGGTCAGCGAGGCCATCGC 16370
||||||| |||||||||||| || | || || | | | || ||||||||| | ||
Sbjct 25479 TGCGCGCCATGGCCTACGTGCAG--GGGCACGGCGCCGACGATGTGAGCGAGGCCCTGGC 25422
Query 16371 CTATCGCGAGCAGTT-CAGCCAGCGCGAGCTGATGCTGATCTATCCCGACTTCGTCGCGT 16429
||| || | |||| | || ||||| ||| |||||| ||||| ||| || |
Sbjct 25421 GTAT-GCAGGGAGTTTCGGCGCCCGCGAAACCATGGTGATCTGGCCCGATTTCAAAGCCT 25363
Query 16430 TCAACACTGCCGACGCCACCACCAGCATGGCGTTCGCGACCGCCCGCGCCCTGGGCCTGC 16489
||||| | | || ||| || ||| || ||| ||| |||| ||||
Sbjct 25362 GGAACACCACGGCAAACAAGGCCATCAATGCGCCGGCTGTGGCCTACGCGATGGGGCTGC 25303
Query 16490 GCGCGATGATCGATGAGCAGCAGGGCTGGCACAAATCGATCTCCAATGTGGCCGTCGCCG 16549
|||| ||||| | | |||| || |||||||| | | || || ||| | | |
Sbjct 25302 GCGCCCGCATCGACGTGGAGCAAGGTTGGCACAAGACCCTGTCAAACGTGCCGCTAAATG 25243
Query 16550 GCGTGACCGGCATCAGCCGCGACGTGCACTGGGACCTGCAAGATCCGGCGACCGACGCTG 16609
|| | ||||||||| |||||||| | ||||||||| ||| ||| |||||
Sbjct 25242 GCCCGGTGGGCATCAGCAAGGACGTGCATTTCGACCTGCAAAGCTCGGAGACGGACGCAA 25183
Query 16610 GCCTGCTGAACGCCGCCGACATCACCACCCTCATCAACTCCAACGGTTACAAGTTCTGGG 16669
|||||| || | | | || ||||||| |||||||||| | | || || |||||||
Sbjct 25182 ACCTGCTCAATGAGGGCAACGTCACCACGCTCATCAACTACCAGGGCTATCGCTTCTGGG 25123
Query 16670 GTTCGCGGACCTGCAGCGACGACCCGCTGTTCGCCTTCGAGACGGCCACGCGCACCGCGC 16729
| ||||| ||||||||| |||| |||||| |||||| | | |||||| || |
Sbjct 25122 GATCGCGCACCTGCAGCACCGACGAACTGTTCCGATTCGAGTCCAGCGTGCGCACTGCCC 25063
Query 16730 AGATCCTGGCCGACACCATTGCCGAGGCGCAGATGGTGTACATCGACAAGCCCGAGCATC 16789
|| | |||||||||||||| || |||| || | | | ||||||||||| ||| |
Sbjct 25062 AGGTGCTGGCCGACACCATGGCAGAGGGTCATTTCGCCTTTGTCGACAAGCCCATGCACC 25003
Query 16790 CGTCGCTCATCCGCGACATGCTGGAGAGCATCAATGCCAAGTTCCGCGAGCTGGTGAACG 16849
| | | ||||| |||| |||||||||||||||||||||| | | || |
Sbjct 25002 CCAGCATGGTGAAAGACATCGTGGAAGGCATCAATGCCAAGTTCCGCGAAC---TCAAGG 24946
Query 16850 CC---GGCTACGT----GGCTG--GTGCATCGCTGTACGACGAGCGGCCAACGAGCCCAG 16900
|| |||||| | | | | | || | | | ||| ||| || |||| | | |||
Sbjct 24945 CCCTGGGCTACATCCTCGACGGCCGCGCCTGGTTTGACGCCGA--GGTCAAC-ACCACAG 24889
Query 16901 -CCAGCT-GAGGCTGG---GGTGACAATCGACTACGACTACACGCCGGTACGCCCGCTGG 16955
||| |||| || | || | ||||||||||||||||| || | |||||||
Sbjct 24888 AAGCGCTCAAGGCCGGCAAGCTGGTGCTTGACTACGACTACACGCCCGTGCCGCCGCTGG 24829
Query 16956 AGAACCTGGTCCTGAACCAGCGCATCACCGACCGCTACTTCGCCGACTTC---------- 17005
| |||||| | ||||||||||||||||||||| |||| |||||||
Sbjct 24828 AAGACCTGGGATTCCGCCAGCGCATCACCGACCGCTATTTCGGCGACTTCGCCATGCGCG 24769
Query 17006 ------CCGGCC-GTATCAACGGCTG-ATGCC-GTACTGAGGA-ACCATTCCCATGTCCA 17055
|||||| ||| |||| | || || | || |||| | | |||||
Sbjct 24768 TGGGCACCGGCCAGTAAGCCCGGCCGCATTCCAGCACACAGGAGATCCACACCATGGGAC 24709
Query 17056 TGCCCAGCAAGCTCAAGAA--TCTCAACCTGTTCAACGACGGCCTCAGCTACCTGGGCCA 17113
||||| |||| |||||||| || | ||| |||| ||||||| | | |||| ||||| |
Sbjct 24708 TGCCCCGCAAACTCAAGAACTTCGCCACC--TTCATCGACGGCGTGAACTACATGGGCGA 24651
Query 17114 GGTCACCGAGGTCAAGCTGCCGACCTTGACCCGCAAGATGGAGGAATACCGCGCCGGCGG 17173
| |||| |||| || || ||| | ||||||||||||||||||||||| || || ||
Sbjct 24650 AATGCCCGAAGTCACCCTCCCCACCCTCACCCGCAAGATGGAGGAATACCGGGCGGGTGG 24591
Query 17174 CATGCTCGGTCCCATCGATATTGACCTCGGCCAAGAGAAAATCGAACTGGAATGGAAGTG 17233
|||| || |||||||| || || | |||| || ||||| ||| || ||
Sbjct 24590 CATGAATGGCCCCATCGAGATGGATATGGGCCTGGAAAAAATGGAAGCCGAGCTCAAAAC 24531
Query 17234 TGGCGGACTGATGCGCGACGTGCTGCGCCAGTACGGCGCCATCGCCCACAACGCCGTGCA 17293
||||| ||| ||| | || || | || || | ||| |||||||||
Sbjct 24530 GGGCGGCTATATGAAAGACCTCATGAAGCAATGGGGTGCGGCCAAGCACGACGCCGTGCT 24471
Query 17294 GCTGCGATTCGCTGGCGCCTATCAGCGCGAAGACAGCGCAGACGTGGACTCGGTCGAGAT 17353
|||||| ||| | ||| ||| ||| ||| ||||||| || |||||| | || || |
Sbjct 24470 GCTGCGCTTCACAGGCTCCTTGCAGACCGACGACAGCGAAGCCGTGGAGGCCGTGGAAGT 24411
Query 17354 CGTCATCCGCGGCCGTCACAGCGAGATCGACGCCGGCACCGGCAAGGTCGGTGAC 17408
|||||| ||||| || | | |||| |||| |||||| | ||||| ||| |||
Sbjct 24410 CGTCATGCGCGGGCGCCTGACCGAGCGCGACCCCGGCAGCTCCAAGGCCGGCGAC 24356
Score = 334 bits (370), Expect = 2e-87
Identities = 720/1064 (68%), Gaps = 27/1064 (3%)
Strand=Plus/Minus
Query 3072 GCTTTCAGCACCAGCCGCGTTTTCACCTCGGGCGAGTAGTTGAA-GACGGTCACGCCGGG 3130
|| |||| |||||| |||||||| ||||| ||| | || ||| |||| | ||
Sbjct 42137 GCCTTCATCACCAGGCGCGTTTTGACCTCCACGCTGTACTGCAATGACT-TCACAGCCGG 42079
Query 3131 GAAGAACTGGCGCACCAGCTGTGCAACGCCGGTGCCCATGCCGGTCGCATCCACGCCGAT 3190
|||||||| ||| | ||| ||||| ||||| || || | ||| | || |||
Sbjct 42078 GAAGAACTTTTTCACGATCTGCAGGACGCCCTGGCCCAGACCTGTGGAATCAATGCAGAT 42019
Query 3191 GTAGGTCACCCAATAGCGCTTGGTGATCTGCTCGATGAACGCGGCCTGGTCCTTGAACTC 3250
|| | ||| || || || ||||| ||||| ||||||| | | || ||
Sbjct 42018 GTGTGCCACGTTGTATTTCTCTGTCATCTGGCGGATGACTTCGGCCTGCGCTTCAAAGTC 41959
Query 3251 CATGCCCTTGAACTGATGGCGTTCCAGCACGCGGAACTTGCCGCAGGGCACCAGCGGCGG 3310
| ||||||||||| ||| ||||||| |||||||||||||| ||| |||||
Sbjct 41958 CGCTCCCTTGAACTGCATGCGCTCCAGCATGCGGAACTTGCCGCCCGGCTTTTCTGGCGG 41899
Query 3311 GGCTACCACCACGATGCCCGCGCTGTCGCCGGTCTCGGCCGGGTCGTAGCCGATCCACAC 3370
||| | ||| || | |||||| |||||| || | | ||||| ||||| ||||| ||
Sbjct 41898 GGCCAGCACTACAAGGCCCGCCGAGTCGCCCGTATGGCTGGGGTCATAGCCAATCCAGAC 41839
Query 3371 AGCGCGGTCGCCGTAGGGCCGGACGGCAAACGGCTTGTAGTCGTCCGCCCACTCGACCCA 3430
| | ||| | ||||| | | || |||||| | ||| |||| | ||||
Sbjct 41838 GGGCTTTTGGCCAAACGGCCGCAACGTGAAGGGCTTGAAATCG---CTCCACGCATCCCA 41782
Query 3431 GCTATCGACCTGACAGGGCTGCAGCATCGTGAGCGGGAATACGCTGGCGCTGTCATCCAC 3490
||| || | || ||| || |||| | | |||||||| || | | ||||||| ||
Sbjct 41781 GCTGTCCGCATGGCAGCGCATCAGCGTGGACAGCGGGAAAACAGCGAAGGTGTCATCGAC 41722
Query 3491 GAACTCGCACATCAGCAGATTGGCGAATTCCTCGGCGCTGTAGTCGCGGCGCAGTTCCTC 3550
||| ||||||| ||||| ||| | |||||||| | || ||| ||||||||| ||
Sbjct 41721 AAACCCGCACATGAGCAGGTTGTCCCATTCCTCGTCCGAATACTCGAAGCGCAGTTCGTC 41662
Query 3551 GATATCGAACAGGTCACAGCCACGGCCGGCCGCATCAAGAACGGTCACGATCTGGCGCCA 3610
| |||||||| | ||||| | || |||||| || || || || ||||| |||||
Sbjct 41661 AAGGTCGAACAGATTGCAGCCGCCGCGCTGCGCATCCAGCACCGTGACAATCTGCCGCCA 41602
Query 3611 GATCGCGTCCTCGCAACGCCG--GCCACCCATCAGGCGCGCGTGGCTCACATCCAGCTGG 3668
||| |||||||| || | ||| || |||| ||| ||||||| |||||||
Sbjct 41601 TATCTTGTCCTCGC--CGGTGAAGCCTCCAGCCAGGTGCGAATGGCTCAGGTCCAGCTCT 41544
Query 3669 ATCTGCTGGGACACCGAGCGTCCCTTGTTGAAGCGCTCGCCGGTCCAGAAGTCGAAGGCT 3728
|| | | | ||| |||||||| ||| ||| || |||| | | ||||
Sbjct 41543 ATGCGGTCCTTTTTGGCGCGCTTCTTGTTGATGCGTTCGGCGCTCCACAGCGCATAGGCC 41484
Query 3729 TCATGCGCCATGGTGGACGGCGTGCTGAAGTAGGTCTTGCGCCACTTCTTGTGCATCGCC 3788
| ||| || | || |||||| || ||||||||||| | |||||| || |||
Sbjct 41483 TGGTGCTGCAGGCTGCTGGGCGTGGAAAACAGCGTCTTGCGCCAATGCTTGTGGATGGCC 41424
Query 3789 ATGCCGCTGGCGACCTTGTTCAGCTGGTTGAAACCGTAGGTCCAGAAGAACTCGTCAAAG 3848
|| |||||||| ||||| ||||| |||| || | ||| ||||| || || ||
Sbjct 41423 ATACCGCTGGCCACCTTCCACAGCTCCGTGAAGTTGTTGACCCAAAAGAATTCATCGAAA 41364
Query 3849 TAGAAATTGCCGTGGTAGCCCTGTGCGGTGCGGGCGTTGGTGCCCAGGAAGAACAGCTCG 3908
|||| |||||||||||| ||| |||||||||||| | ||||||||||| ||||| |
Sbjct 41363 TAGAGATTGCCGTGGTACGACTGCGCGGTGCGGGCGCTCGTGCCCAGGAAATACAGCGTG 41304
Query 3909 GCGCCATTGGCCAGGGTGATCGGGTCGCCGGTCAGGTCACGGTC-CA--GCACCT---CA 3962
||||||||| |||| ||| |||||||| ||| || || || || ||| ||
Sbjct 41303 GCGCCATTGCTCAGGACGATGGGGTCGCCCTTCAAATCGATATCGCAATGCTCCTTGGCA 41244
Query 3963 CGCACGAAGCCCCGCATATA--GCCGAGGAAGATGTGCGCTTGGCTCTTGGAT-GCGCTC 4019
| ||| | || || |||| || ||| || || || | || | ||
Sbjct 41243 AACGCGATG------ATGTACTGCCGGAAAACATGGGC-CT--GCGCACGGCTGGCCGAA 41193
Query 4020 AGGAAAATCTGGTTGCGGCCGGTGGTCAGCGCGTCGATCAGCGCCTCGCGGGCGAAGTAG 4079
|| |||||||| |||||||| || |||| || || ||||| ||||||||| |||||||
Sbjct 41192 AGAAAAATCTGATTGCGGCCCGTCTTCAGGGCATCAATCAGGGCCTCGCGGCCGAAGTAC 41133
Query 4080 TAGGTGGCACCGATCTGGCGCGACTTCAGGATGATGCGCGTGCG 4123
| || || |||||||||||||| || || ||| |||||||||
Sbjct 41132 CACGTTGCCCCGATCTGGCGCGATTTGAGAATGGCGCGCGTGCG 41089
Score = 156 bits (172), Expect = 9e-34
Identities = 260/372 (70%), Gaps = 8/372 (2%)
Strand=Plus/Minus
Query 1977 GGCACGATGCCCAGCAGCTGCGGCGGTACCCGTAACGCGGCCAGCATGTCATCGCGGGTC 2036
||||| | ||||| |||||||| || || || ||||||| |||||||||| ||
Sbjct 43240 GGCACCACGCCCATGAGCTGCGGAGGCACGCGGTGGGCGGCCAATTGGTCATCGCGGCTC 43181
Query 2037 ACGCTCTTGATGCCGGTGAATTCATCCCTTGCCGCCACCTCACTGACCGGGATCACCTGC 2096
||| |||||||| | ||||||||| | |||||| |||| | || || | || ||
Sbjct 43180 ACGTTCTTGATGTTGAAAAATTCATCCTTGGCCGCCGCCTCGCCGATGGGCAGCAGTTGG 43121
Query 2097 AGGCCGTCCTTCTTCCCGTTGGGCGAGTGAACGAACAGGTTCTTGAAATTGCCCG-GCCC 2155
| | | | || || ||| |||||| || | ||||| || |||||||||| ||||
Sbjct 43120 ATGGCTTTCTCTTTGCCGCCGGGCGAATGGAAAAACAGATTGCGGAAATTGCCCATGCCC 43061
Query 2156 GCGCGACTGCCGCAGTGCGTCGCGTAACGCATCCAC---GTCCATGCCCTCGGGTTGGGG 2212
| || || || | ||| | ||||||||| ||| | || | || |||
Sbjct 43060 TTG-GAAGATTTCAAGGCCTGGCGCAGCGCATCCACATCGTCTTTTGCCAC---TTCGGG 43005
Query 2213 ATCGGTCATGTAGAGGATGTAGCCGGCGTGCGAACCGTTGTTGTAATACTTCCGGCGGAA 2272
|||| ||| ||||||||||| ||||| || || |||||||||||| || || ||
Sbjct 43004 ATCGCTCAGATAGAGGATGTATCCGGCATGGCTCCCATTGTTGTAATACCGGCGCCGAAA 42945
Query 2273 AAGCGTGGCCGACTCATTCAGCAACGCGGCCTGTACGGCTGGCATCCATTCCGGCAGGCC 2332
||||||||||||||||| ||| | |||| ||| | || | || | | |||||| ||
Sbjct 42944 CAGCGTGGCCGACTCATTGAGCCAGGCGGACTGCAGCGCGGCCAGGTACTGCGGCAGTCC 42885
Query 2333 GTAGATTTCCTG 2344
|||||||||||
Sbjct 42884 ATAGATTTCCTG 42873
Score = 145 bits (160), Expect = 2e-30
Identities = 326/482 (68%), Gaps = 32/482 (7%)
Strand=Plus/Minus
Query 4773 TCCGAGTTCTTTCGTGTTGCCGTCGAAGGCGCCACCACCGATGGCCG----AGTGATCGA 4828
||| |||| || || || || ||||| ||||| || |||||||| | | |||
Sbjct 40369 TCCAAGTTGTTCCGCGTGGCTACTGAAGGTGCCACTACTGATGGCCGCACCATTTCTCGG 40310
Query 4829 GCGTCAGCAGATCGCGGACATCGC-CGAAACCTACGACCCGGAGGTGTACGGCGCACGCA 4887
|||| ||||| | | || || || ||| | ||||||| || |||| ||| ||
Sbjct 40309 GCGTG----GATCGAGCAAATGGCTCGCAACTT-CGACCCGAAGAAATACGCCGCCCGTG 40255
Query 4888 TCTGGCTGGAACACTTCCGCAGCACGCTGCCGGACAGCCCGTTCCGCGCCTATGGCGACG 4947
||||| | || ||| | ||| || |||||| |||||| |||| |||| | |||||||
Sbjct 40254 TCTGGATCGAGCACATGCGCGGCCTGCTGCCTGACAGCTCGTTTGCCGCCCAGGGCGACG 40195
Query 4948 TGCTGGCGGTGAAGGCCGAGGAAGTCGAAATTGCCGGCAAGAAGAAGCTGGCGCTCTTCG 5007
|||| | ||| ||||| || | | | | | ||||||| || ||||| | |
Sbjct 40194 TGCTTTCCGTGCAGGCCAAGCAGGAGGCA---GACGGCAAG------CTCGCGCTGTATG 40144
Query 5008 CCCAGGTCGAGCCGACCGACGACCTGGTCGACATGGTCAACGTGCGCAAG---CAGAAGG 5064
| ||| | |||| ||| ||| ||| ||| |||| | ||| ||||||
Sbjct 40143 CGCAGATTCAGCCCCTGGACTCTCTGATCGCCAT---CAACCAG---AAGGGCCAGAAGC 40090
Query 5065 TCTTTACCAGCATCGAGATTTCCCCGGAGTTCGCCGACAGCGGCAAGGCGTACCTGTTCG 5124
||| |||| ||||||| | ||| || ||||| | | ||| |||| || || |||
Sbjct 40089 TCTATACCTCCATCGAGGTGGACCCCGATTTCGCGGGCTCCGGAGAGGCCTATATGGTCG 40030
Query 5125 GCCTGGCCGTGACCGACTCCCCCGCCAGCCTGGGCACCAGCATGCTCGCGTTCTCGGCCC 5184
|||||||||| |||||| | || ||||||||||||||| ||||| ||| | || |
Sbjct 40029 GCCTGGCCGTCACCGACACGCCGGCCAGCCTGGGCACCGAGATGCTGCAGTTTGCCGCGC 39970
Query 5185 AGCACCCGGAGAGCAGCCCGCTCAAGGACCGCAAG--CAGGCCCCGGAGAACCTGTTCAC 5242
|||| || | | ||||||||| | ||||||| || | |||| ||||| |||||
Sbjct 39969 AGCATCCCAACACCAGCCCGCTGGCCGGCCGCAAGATCAAG--CCGGGCAACCTCTTCAC 39912
Query 5243 CG 5244
||
Sbjct 39911 CG 39910
Score = 138 bits (152), Expect = 2e-28
Identities = 602/931 (65%), Gaps = 45/931 (5%)
Strand=Plus/Minus
Query 5737 GCCGACTGTGCAGCAGAGCCTCGAAGCCCGCATGCAGGAAAGCAGTACCTTCCTGCAGGC 5796
|||||| |||||||||| || ||| |||||||||||||| ||| | |||||| || |
Sbjct 39386 GCCGACCGTGCAGCAGAAGCTGGAAACCCGCATGCAGGAATCGAGTTCATTCCTGAAGTC 39327
Query 5797 GATCAACATGGTCGGCGTGAACGAACTGAAGGGCCAGAAGGTTGGCGTTGGCATCACCGG 5856
|||||||| | |||| | | ||||| | ||||| || | || | ||| |
Sbjct 39326 CATCAACATCCTGCCCGTGGTGCCGCAGCAGGGCGAAAAGGTGGGTCTGAGCCTGACCCG 39267
Query 5857 CACCATTGCCGGCCGCACCGACACCAGCGGCAACGGCGAGCGCAATCCGTCCGATCCGAC 5916
|| | ||| ||||||| ||||||| || ||||| ||||| | ||||||||
Sbjct 39266 TCCCGTCGCCAGCCGCACGGACACCACCGCTGACGGCCCCCGCAAGACCAAAGATCCGAC 39207
Query 5917 CTCGCTGGTGTCCAACACC---TACGAGTGCCAGAAGACCGACTTTGACACCGCCCTGCC 5973
|| ||| ||| ||| | |||| | ||| || | || ||| | |
Sbjct 39206 AGGCAAGGA---CAAGACCGGATACCACTGCCTGCAGATTGATTCCGATACCCACATCAA 39150
Query 5974 CTATGCCCGCCTGGACGCCTGGGCGCATCGCCCCGAGTTCCAGACCCTGATCCGCGACGC 6033
|| || || || ||||||||||| |||||| || ||| | ||| |||||
Sbjct 39149 GTACGCGATGCTCGATGCCTGGGCGCACTTCCCCGACTTTCAGGTGCGTATCAGCGACCT 39090
Query 6034 GATCATCCAGCGCCAGGCACTGGACCGGATCATGATCGGCTGGCACGGCACCAGCATTGC 6093
||| | | ||| | || |||||||| |||||| | || ||| |||||| || | ||
Sbjct 39089 GATTGCCGAACGCAATGCGCTGGACCGCATCATGGTGGGATGGAACGGCA--AGGAA-GC 39033
Query 6094 CAT---CAACACCGACCGCGTCGCCAATCCGATGCTGCAGGACGTGAACAAGGGCTGGCT 6150
|| || |||| || |||||| || |||||||||| ||| |||||| |||||
Sbjct 39032 CAAGGCCACCACCAACTTGACCGCCAACCCTTTGCTGCAGGATCTGACCAAGGGGTGGCT 38973
Query 6151 GCAGAAGTACCGCGAGCATGCGCCCGAGCGCGTCATGACCGATGCGTCGATGGCAGCGGC 6210
|||| ||||| | |||||||||||||||||| | || | |||| |||
Sbjct 38972 GCAGCGCCTGCGCGAAGAGGCGCCCGAGCGCGTCATGTCTTCTGGCAAGGTGGC--GGGC 38915
Query 6211 AAGATCAAGGTGGGCGGTACC-GGCGCTGACTACGGGCAACATTGATGCCCTGGTGATGG 6269
||| ||| ||||| ||| || | |||||| | ||| | || ||||||| ||||
Sbjct 38914 AAGGTCACTGTGGG----ACCGGGTGGCGACTACAAG-AACCTCGACGCCCTGGCCATGG 38860
Query 6270 --GACTTG--GTCGCCAACATGATCGACCCGT-GCATCAGAAG-ATCCGAGCCTG-GTGT 6322
| | | |||| |||| || ||| ||| | ||| | ||| ||| | |
Sbjct 38859 ATGCCAAGCACTCGC-----TGATTGATTCGTGGCACCGCAAGCACCCGGATCTGCGCGC 38805
Query 6323 GATCTGC-GCCGCCAGCTGGTGCACGACAAGTATTTCCCGATCATCAACCGTGACAACG- 6380
|||||| || | ||| |||| |||||| ||||| ||| | ||| ||||||
Sbjct 38804 CATCTGCAGCGATGACCTGATGCATGACAAGCTGTTCCCCATCGTGAAC---AACAACGA 38748
Query 6381 --CCCCCACCGAGAAGGTCGCGGCCGAACTGATCCTGGGCGCCAAGCGCATCGGTGGCCT 6438
|||| |||| | |||||||| || | || || | |||| | || |||
Sbjct 38747 TCTGCCCAGCGAGCGCCTGGCGGCCGACATGGTGGTGAGCCAGATGCGCCTGGGCGGCAG 38688
Query 6439 GCAGCCGGTCATCGTGCCGTTCTTC-CCGGCCAAGTCGCTGATGGTGACCAGCCTC--AG 6495
||| | || | |||||| |||||| || | | | ||| | | || ||||| |
Sbjct 38687 CCAGGCCGTGACCGTGCCTTTCTTCATCGACGGTGGC-CTGCTCATCAC--GCCTCTGAA 38631
Query 6496 CAACCTGTCGCTGTACTGGCAGATTGCCTCGCGCCGCCGTCACATCATCGAGCAGCCGAA 6555
|||||||| | |||||||| | |||||||| ||||||||| | |||
Sbjct 38630 AAACCTGTCCATCTACTGGCAACGCGATGCGCGCCGCAAGGCCATCATCGACAACCCGTC 38571
Query 6556 CAAGAACCGCGTCGCCAACTTCGAGTCGTCCAATGATGACTACGTGGTGGAGGACTACGG 6615
|| ||||| || | | ||| | ||||| || ||||| ||| | ||||| | |||
Sbjct 38570 CATGAACCAGGTGGACTTTTTCAACAGCTCCAACGACGACTATGTGATCGAGGATTTCGG 38511
Query 6616 TCTGGGCGCGGTGGCCGAGAACATCGAGTTC 6646
| |||| | | ||| |||||||| |||
Sbjct 38510 CGCGTGCGCCTTCGTCGAAAACATCGAATTC 38480
Score = 111 bits (122), Expect = 3e-20
Identities = 153/215 (71%), Gaps = 12/215 (6%)
Strand=Plus/Minus
Query 17680 TCACGCTCGACTACCCAATCCAGCGCGGCGAGCAGGTCATCGCCACGATCAAGCTGCGCA 17739
|||||||||| | || ||||||||||||| ||||| | | | |||||||
Sbjct 23985 TCACGCTCGAATCGCCCATCCAGCGCGGCGCCACCCACATCGAGCTGCTGCACCTGCGCA 23926
Query 17740 AGCCGAACGCCGGCGAACTGCGCGGCATCAAGCTGGTCGACCTGCTGCAGATCGACGTGA 17799
||| ||||||| |||||||||||||| |||| ||| |||||| ||| ||
Sbjct 23925 GGCCCCTGGCCGGCGCCCTGCGCGGCATCAACCTGGCCGAGCTGCTG------GACCTGC 23872
Query 17800 GCGCCGTGGCCGCG------CTGCTGCCGCGCATCACCGAACCGACGCTGACAACTGCCG 17853
|||||| ||||| |||||||||||||||||||| ||| ||||||| | | |
Sbjct 23871 GCGCCGAGGCCGTCATGGTCCTGCTGCCGCGCATCACCGAGCCGCCGCTGACCAAGCCGG 23812
Query 17854 ACGTGAACAAGCTGGACCCGGCCGACCTGGTCGCC 17888
| ||| | ||| ||||||| | ||||| || |||
Sbjct 23811 AGGTGGAAAAGATGGACCCCGTGGACCTCGTGGCC 23777
Score = 105 bits (116), Expect = 1e-18
Identities = 283/428 (66%), Gaps = 15/428 (4%)
Strand=Plus/Minus
Query 21850 GATGCGGTGGCCACGGTGAAAGCCGGCGCGCTGATCTTC--GCGCCCAT-CGGCGCCAGC 21906
|| || ||||||||||| ||| || ||||||||| |||| || | || || |
Sbjct 20077 GACGCCGTGGCCACGGTCAAAAAAGGGCAGCTGATCTTTCTGCGCACAAACAGCCGCACC 20018
Query 21907 AAGACAGCCAGCGGCCAGCCGCTTCCCGGTGTCCAGATCACTCGCGCATCCGGCGATCAA 21966
|| |||||||||||||| | || | | || ||||| |||| | | ||||| |||
Sbjct 20017 AAC---GCCAGCGGCCAGCCCATCGCCCCTATGCACATCACGCGCGAAGCGGGCGACCAA 19961
Query 21967 CACCGCT---ACACCGTGGCTGACCGCGAGAAGTACACAGGCGTGCGCGCGTACTGGGGC 22023
||||| | ||||| || |||||| || ||||| || |||||||| || |||
Sbjct 19960 CACCGATGGCACACC---GCAGACCGCACCAACTACACCGGGGTGCGCGCCTATTGGACT 19904
Query 22024 GACCGCAAGGCCGCACGCCGCACCGGCGTCCTGGTGGGCAC---GTCAGAGAACGAGAAA 22080
||| ||||| ||| ||||||| ||||| |||| |||||| | | | | || ||
Sbjct 19903 GACGGCAAGCGCGCCCGCCGCAGGGGCGTGCTGGCGGGCACCAAGACGGGCAGCGTCAAG 19844
Query 22081 AGGCTGCAGCCCACGTATGCCACTGCGGAGGAAGCGCGCCAGCATGCTGAGGCAGAGTTC 22140
| |||| | ||| | |||| || |||| ||||||||| || | | ||| |
Sbjct 19843 ACGCTGAAAGACACCTTCGCCAGCGCCGAGGCCGCGCGCCAGGCCGCGCAATCGGAGATG 19784
Query 22141 AAACGGCTTGATCGCGGCACCGCCCAGCTCAGCTACCGCCTCGCACTCGGGCGCGCCGAT 22200
| || | || || ||| ||||| || ||| ||| || || || || || |
Sbjct 19783 CAGCGCGTGGACCGTGGCGCCGCCACCCTGAGCCTGGCCCTGGCCCTGGGCCGGCCCCAC 19724
Query 22201 ATCTACCCAGAGCAAACCGTGACGGTGAGCGGCTTCAAACCGGAAATTGATGGCACCGAT 22260
|| || || ||||||| ||| ||||||||||| || ||||| ||| |
Sbjct 19723 CTCATGCCGCAGGCGGCCGTGACCGTGGAGGGCTTCAAACCCGAGATTGACGGCGAGGGC 19664
Query 22261 TGGCTGGT 22268
||||||||
Sbjct 19663 TGGCTGGT 19656
Score = 102 bits (112), Expect = 2e-17
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 15533 GGCGCACCTGCGGCAGTCCATTGCCGACATTCTTACTACTCCCATCGGCTCGCGCATCCA 15592
|| ||| ||||| || ||||||| |||||| || | || ||||||||| ||||| ||
Sbjct 33205 GGAGCATCTGCGCCAATCCATTGGCGACATCCTGGCCACGCCCATCGGCACGCGCGTCAT 33146
Query 15593 GCGCCGCGACTACGGCTCGCTGCTGCCTGAGCTGATCGACCAGCCGTTCAACGAAGCCAC 15652
||||||||| ||||||||||| |||| | |||| | |||||||| |||| ||||
Sbjct 33145 GCGCCGCGATTACGGCTCGCTTGTGCCCGCGCTGGTGGACCAGCCCGACAACCGCACCAC 33086
Query 15653 GCGGTTGCGTCTTTATGGCGCTACTGCAACGGCGCTGATGCGTTGGGAGCCGCGCCTGC 15711
| || || ||| | || | || |||||||| ||||||||||||||||
Sbjct 33085 TGAAATCCGCCTGCTGTCCGCCGCCGCCAGTGCCCTGATGCGCTGGGAGCCGCGCCTGC 33027
>seq10554
Length=25488
Score = 187 bits (206), Expect = 5e-43
Identities = 174/221 (79%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 32612 CAACCTGTTCGCCCGCACCGCCTCTCGATAGGCCTCGATCTTGGCCACATCCTCGCGCAG 32671
|| || |||| |||| ||| ||| | | | | |||||||||||||||||| |||||
Sbjct 6719 CAGCCGGTTCCCCCGGACCTTCTCCTGCCATGTCAGGATCTTGGCCACATCCTCCCGCAG 6660
Query 32672 GCGGGTCTCGTGCCTGGTCACCCACATCTCAGCGCCGGCGCGGCCCTGCTCGTAACTGCT 32731
| | ||||||||||| |||||||| ||| || || || |||||||||||||| ||||
Sbjct 6659 CCTGTCCTCGTGCCTGGCCACCCACAGCTCGGCCCCTGCCCGGCCCTGCTCGTAGTTGCT 6600
Query 32732 ACACCGGCGGGACGGCCCGCCGGGACCATGCCGATGCCGGTCGAGACTGGCAATCCAGAT 32791
|||| ||| ||||||||||||| ||||||||||||||||| || ||| ||||||||
Sbjct 6599 GCACCAACGGAACGGCCCGCCGGGGCCATGCCGATGCCGGTCCAGCGAGGCGATCCAGAT 6540
Query 32792 CCCATCGTTCACCCGTCGTAGCAGTACGACCACCCACACGC 32832
||| ||||||||||| | || | |||||||||||||
Sbjct 6539 CCCGTCGTTCACCCGCTGGGCCATAGCCACCACCCACACGC 6499
Score = 109 bits (120), Expect = 1e-19
Identities = 120/157 (76%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 32579 CCAGCCGAAAGGCGGCTCGATGTGCAGC-TTCTTCAACCTGTTCGCCCGCACCGCCTCTC 32637
||||||||||||||| || || |||| || || || |||| |||| ||| |||
Sbjct 6878 CCAGCCGAAAGGCGGATCCTGGT-CAGCCTTGCCCAGCCGGTTCCCCCGGACCTTCTCCT 6820
Query 32638 GATAGGCCTCGATCTTGGCCACATCCTCGCGCAGGCGGGTCTCGTGCCTGGTCACCCACA 32697
| | | | |||||||||||||||||| ||||| | | ||||||||||| ||||||||
Sbjct 6819 GCCATGTCAGGATCTTGGCCACATCCTCCCGCAGCCTGTCCTCGTGCCTGGCCACCCACA 6760
Query 32698 TCTCAGCGCCGGCGCGGCCCTGCTCGTAACTGCTACA 32734
||| || || || |||||||||||||| |||| ||
Sbjct 6759 GCTCGGCCCCTGCCCGGCCCTGCTCGTAGTTGCTGCA 6723
>seq13794
Length=941
Score = 109 bits (120), Expect = 1e-19
Identities = 111/145 (77%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 5112 GCGTACCTGTTCGGCCTGGCCGTGACCGACTCCCCCGCCAGCCTGGGCACCAGCATGCTC 5171
|| |||||| |||| | ||||| |||||| |||| ||||||||||||||| ||||||
Sbjct 934 GCCTACCTGGACGGCATTGCCGTAACCGACACCCCAGCCAGCCTGGGCACCGAGATGCTC 875
Query 5172 GCGTTCTCGGCCCAGCACCCGGAGAGCAGCCCGCTCAAGGACCGCAAGCAGGCCCCGGAG 5231
| ||| |||||||| || || || ||| |||||| || || | | ||||||
Sbjct 874 ACCTTCAGCGCCCAGCATCCCGACGCCAACCCACTCAAGTCGCGAAAAAATGACCCGGAC 815
Query 5232 AACCTGTTCACCGAGGCCACCGAGA 5256
||||||||| ||||||||| |||||
Sbjct 814 AACCTGTTCTCCGAGGCCATCGAGA 790
>seq5906
Length=1255
Score = 100 bits (110), Expect = 6e-17
Identities = 242/362 (67%), Gaps = 7/362 (2%)
Strand=Plus/Minus
Query 15938 CCACCGCTATCGTCGGCGTCGTCTGCACCGCGCAGGACGCAGACGCCACGCTGTTCCCCC 15997
||||||| ||| |||| | ||| || |||| ||||| || || | | ||||| |
Sbjct 650 CCACCGCGATCATCGGTATGGTCGCCATCGCGGCCGACGCTGATCCCGCTATCTTCCCGC 591
Query 15998 TCGACCGACCGGTGCTGCTGACCGACGTGCTGGGCGCCGTCGGCAAGGCCGGCACCAGCG 16057
|||| || |||| ||| | ||||| || |||| ||||| ||||| || ||
Sbjct 590 TCGATCGCCCGGCGCTCATCACCGATGTTGAAACCGCCATCGGCGCCGCCGGGACGGACG 531
Query 16058 GCACGCTGCGCGCCACGCTGCAGGCCATTGCCGACCAGGCCAACGCCATTACCGTGGTGG 16117
|||||||| | |||||| ||||| ||||| || || | | || | || ||||
Sbjct 530 GCACGCTGGCCCTGTCGCTGCGCGCCATCGCCGATCATGCTCGCCCGATCATTGTCGTGG 471
Query 16118 TGCGCGTCACCGAAGGTTCCGACGACAGCGCCA-CCACCGCCAACGTGATCGGCAAGAAG 16176
| ||||| ||||||| ||| | | ||| | || || ||| || ||||| | ||
Sbjct 470 TCCGCGTGGCCGAAGGGGACGATG-CGGCGGAAACCGCCAGCAATGTCATCGGTACGACC 412
Query 16177 GACGGC----GCCACCTTCACCGGCATGCAGGCGCTGCTGGTGGCTGAGGCGCAGGTAGG 16232
|||| | |||| || || |||||||||||||||| ||| |||||||| | ||
Sbjct 411 GACGCCAACGGCCAAAAG-ACAGGTATGCAGGCGCTGCTGGCGGCGCAGGCGCAGCTGGG 353
Query 16233 CGTGCGTCCGCGCATCCTCGGCGCACCCGGTCTGGACACCCAGCCGGTTTCGGCCGCACT 16292
|| || ||||||| | | ||||| || || || ||| |||| || | || ||
Sbjct 352 GGTCAAGCCAAAGATCCTCGTCACCCCCGGCCTTGAAACGCAGGCGGTGACGACGGCGCT 293
Query 16293 GG 16294
||
Sbjct 292 GG 291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107139237332146
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |