Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq8824 96.9 5e-15 >seq8824 Length=455128 Score = 96.9 bits (106), Expect = 5e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 87406 TGTAGCGCGTCGGAAAGTCCACTTTGGACCCCTCTCGGTAAATCACACTGAGCCACGTCT 87465 || || || ||| ||| || || ||| || | ||| ||||| ||| | ||| Sbjct 134180 TGCAGGGCCTCGACAAGGCCGGATTTGACGCCGCGCGGCAAATCCACCTGGCTCGGGTCG 134239 Query 87466 CCGTTAACAATCACGGTCACGTTCTCACCCAGACGTGTCAGGAACATTTTCATCTGTGCC 87525 ||| | || |||| | |||| || || ||||| |||||||||||||||||||| | Sbjct 134240 CCGGTCACGATCATGCGGCCGTTTTCGCCGAGACGCGTCAGGAACATTTTCATCTGCATC 134299 Query 87526 TTGGTTACGTTCTGGGCTTCGTCCAGGATAACTACCGCGTTCTCAAACGTGCGGCCACGC 87585 | || |||||||||||||||||| || || | || || ||| ||||||||| ||| Sbjct 134300 GTCGTGGTGTTCTGGGCTTCGTCCAGAATGACGGCGGCATTGGCAAGCGTGCGGCCGCGC 134359 Query 87586 ATATACGCGAAGGGAGCAATTTC 87608 || | |||| || || ||||| Sbjct 134360 ATGAAGGCGAGCGGGGCGATTTC 134382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698425305414360