Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_023612.1
Length=39078
Score E
Sequences producing significant alignments: (Bits) Value
seq6415 89.7 1e-13
>seq6415
Length=247467
Score = 89.7 bits (98), Expect = 1e-13
Identities = 207/310 (67%), Gaps = 4/310 (1%)
Strand=Plus/Plus
Query 35655 AACCCAAACAGCCGCCGCTTAATGGTGAACGCTTGGAACACCGGAGAATTACATAAAATG 35714
|| |||| |||||||||| || || | || |||||| ||| || | | | |||
Sbjct 53275 AATCCAAGCAGCCGCCGCCACATCGTCACGGCCTGGAACCCCGCCGATGTCGACGACATG 53334
Query 35715 GCGCTGCCGCCTTGTCATTTTGCCTTT--CAATTCAACGTCACCGATGGAAAATTAAATT 35772
|| |||||||| || || | |||| | || ||| |||| | || ||||| | | |
Sbjct 53335 GCCCTGCCGCCCTGCCACT--GCCTGTTCCAGTTCTTCGTCGCGGACGGAAAGCTGAGCT 53392
Query 35773 GTATGGTTTACCAACGCAGCGGAGATATGTTTTTAGGGGTACCGTTTAACATCGCCGGTT 35832
| | | || |||||||||| || |||| |||||||| ||||| ||||||||| |
Sbjct 53393 GCCAGCTCTATCAACGCAGCGCCGACGTGTTCTTAGGGGTGCCGTTCAACATCGCCTCCT 53452
Query 35833 ATGCAGCTATAACCATGATGATTGCCCAATTAACCAATTTAGAGCCGGGCGAGCTTGTCC 35892
| || | ||| ||||| | ||| | | | | |||||||||||| | ||||
Sbjct 53453 ACGCCCTGCTGACCCTGATGGTCGCCAAGGTCGTCGGCCTGGAGCCGGGCGAGTTCGTCC 53512
Query 35893 ATGCTATCGCAGACGCGCACATTTATTTAAATCACATCGAGCAAGTAAAGGAACAATTAA 35952
| | ||| ||||| ||| | ||| | || ||| |||| || | ||||| | |
Sbjct 53513 ACACCTTCGGCGACGCCCACCTCTATCTGAACCACCTCGACCAGGCCCGCGAACAGCTGA 53572
Query 35953 GCCGCGAGCC 35962
|||||||||
Sbjct 53573 CCCGCGAGCC 53582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124905659672320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |