Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_023747.1 Length=59672 Score E Sequences producing significant alignments: (Bits) Value seq9463 105 3e-18 >seq9463 Length=63583 Score = 105 bits (116), Expect = 3e-18 Identities = 110/144 (76%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 54007 GCCTTTCGTTTATCC----GCATGTGGCGCTGATGCCCGATGCGCATTTCGGTAAGGGCA 54062 |||| |||| |||| ||| |||||| |||||||||| | ||| | || | |||| Sbjct 40945 GCCTGCCGTTCATCCACAAGCACGTGGCGGTGATGCCCGACGTGCACTGGGGCATGGGCG 40886 Query 54063 GCAGTGTCGGCACGGTGATCCCAACCGAGGGCGCTGTGATCCCGGCGGCCGTCGGCGTCG 54122 || |||||| |||| ||||| |||| || || | ||||||||||| |||||||||| Sbjct 40885 CCACCGTCGGCTCGGTCATCCCGACCGTCGGGGCGATCATCCCGGCGGCGGTCGGCGTCG 40826 Query 54123 ATATTGGTTGCGGCATGATCGCGG 54146 | || || ||||||||||| |||| Sbjct 40825 ACATCGGCTGCGGCATGATGGCGG 40802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190794674920572