Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_024359.1
Length=133048
Score E
Sequences producing significant alignments: (Bits) Value
seq10153 266 3e-66
>seq10153
Length=9971
Score = 266 bits (294), Expect = 3e-66
Identities = 640/963 (66%), Gaps = 4/963 (0%)
Strand=Plus/Minus
Query 92030 AGTGGTATCGTAAACTGGAACGATATTCGGTATCCATCTTTCTATCGAGCTTACAAAGAG 92089
|| || ||| | ||||||||||| |||| ||| || || |||||||| || ||||| |||
Sbjct 7677 AGCGGCATCCTCAACTGGAACGACATTCCGTACCCGTCGTTCTATCGGGCCTACAAGGAG 7618
Query 92090 TTAACTACAAATTACTGGTTGCCTGATGAGGTAGATATGAAGAGCGATGCCAAACAGTAC 92149
| | || || | |||| | || || ||||| || |||||| ||||||| ||||||
Sbjct 7617 CTGTCGACCAACTTCTGGATTCCCGACGAGGTCGACATGAAGCTCGATGCCCGCCAGTAC 7558
Query 92150 AACCACTTATCCGAAGAAGAGAAATATGCGTTTGACTCCATTATCGGACTTTTAGCTACA 92209
| | | || | || || | || | ||||| || ||||| || | || ||
Sbjct 7557 GGCGAGCTCAACGCACGCGAAAAGAACGCCTACGACTCGATCATCGGCCTGCTCGCCACG 7498
Query 92210 CTTGACTCACCCCAAACACGTTTTATTTATAATATCGCAGAGTATGTCAGTGATGCCTCT 92269
|| |||||||| || || || || || || || | || ||||| | | || | |
Sbjct 7497 CTCGACTCACCGCAGACCCGCTTCATCTACAACGTGGCCGAGTACATTACCGACCCAGCG 7438
Query 92270 GTTCATGCTATTACAGCTATTATTGCACAACAAGAAGCTATTCATAATGAGAGTTATTCT 92329
| ||||| | | |||| || || | || || |||| || || || ||||| ||
Sbjct 7437 GCGCATGCCAATGCAGCGATCATCGGCCAGCAGGAAGTGATCCACAACGAGAGCTACAGC 7378
Query 92330 TATGTACTTGCTTCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTAGA 92389
|| || || || || || || || | | | ||||| || | || ||| || |
Sbjct 7377 TACGTGCTGGCCTCGATCACCGACCTGCCGAACCAGAACCGCATCTTCGAGATCGCCCGC 7318
Query 92390 ACACACCCTACGATTATTAAACGTAATGCACCTATTATGGAGTCTTATGACGATTTCATG 92449
|| ||||| || || || || || || ||||| || |||| | |||||||| ||||||
Sbjct 7317 ACCCACCCGACCATCATCAAGCGCAACGCACCGATCATGGGCGCGTATGACGACTTCATG 7258
Query 92450 AATAATAAAACACCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGGGT 92509
| || || | |||| || | || | | | || || || ||| | || ||
Sbjct 7257 CGCGAGAAGACCGCCGAGACCCTGCTGAAGTCGCTGATCCAGTCCTCGATCCTGGAAGGC 7198
Query 92510 ATTAATTTCTACAGCGGTTTTGCTTACTTCTATAACCTTGTTCGTCAAAACAAGATGACG 92569
|| || ||||| |||||| || |||||||| ||| | || || || ||| ||||
Sbjct 7197 ATCAACTTCTATTCCGGTTTCGCCTACTTCTACAACATGGTGCGGCAGAACCGCATGAAC 7138
Query 92570 GGAACAGGTAAAATCATTAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAGTTTATT 92629
|| || || || ||||| |||||||| || || || ||| | || ||| | ||||| ||
Sbjct 7137 GGCACCGGCAAGATCATCAGCTTCATCAACCGCGACGAGCTGGCGCATACCAAGTTCATC 7078
Query 92630 TCTGAGCTAATTAGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAAT 92689
||| | || | || || | || || |||||||| || || || | || || |
Sbjct 7077 AGCGAGTTGATCCGCGCCATCATCGGCGAGAACCCTGAGCTGCAGACCAACGAGCTGACC 7018
Query 92690 GACTACGTGTATGCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGC-GTGGTCTAGTGA 92748
| ||||||| | || || ||| || | ||||| || | || |||||| ||
Sbjct 7017 GCCTACGTGCACCAATCATTCGAACACGCGATCGAGCTGGAG-ACGCAGTGGTCGTCGGA 6959
Query 92749 GGTACTACAGGGCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATATCG 92808
||| || | || || || || || || ||||| || ||| | ||| || || || ||
Sbjct 6958 GGTGCTGGACGGTATCGACGGCATCGACGTGGACGAGATGGTGCGCTACGTGAAGTACCG 6899
Query 92809 TGCTAATAAAATGTTAGGGATGCTAGGTCTCCAACCAATGTATCAAGGTCAT-ACAGAAA 92867
|| || || ||| || ||||| || || | | |||| || | || || || |
Sbjct 6898 CGCCAACAAGATGGCCGGCATGCTCGGCATCGAGCGCCTGTA-CAGCGACACCACCGACA 6840
Query 92868 ATTCTATGACATGGATTAAAGCTTACGCCGATAATTTTACAGAAACAAAAACCGACTTTT 92927
| ||| | ||||| || || |||||||| || || || ||||| || |||||||| |
Sbjct 6839 ACGTGATGCCGTGGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCT 6780
Query 92928 TCGAAATGCGTAACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACTTAT 92987
|||| ||||| || | ||||||||||| || ||| | ||||| || ||||||||| | |
Sbjct 6779 TCGAGATGCGCAATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGATGACCTCT 6720
Query 92988 GAG 92990
|||
Sbjct 6719 GAG 6717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425550683681291
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |