Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_024364.1
Length=131952
Score E
Sequences producing significant alignments: (Bits) Value
seq10153 257 1e-63
>seq10153
Length=9971
Score = 257 bits (284), Expect = 1e-63
Identities = 638/963 (66%), Gaps = 4/963 (0%)
Strand=Plus/Plus
Query 37996 CTCATAAGTCATCGAACCCATTATCTAAATTTGTTTTCTTGTAACTAGAGTTACGCATTT 38055
|||| | ||||||||| || || || | || || ||||||||||| | || ||||| |
Sbjct 6717 CTCAGAGGTCATCGAAGCCGTTGTCGACGTTGGTCTTCTTGTAACTTGCATTGCGCATCT 6776
Query 38056 CGAAAAAGTCGGTTTTTGTTTCTGTAAAGTTATCGGCGTAAGCTTTAATCCATGTCATAG 38115
|||| |||||||| || ||||| || ||||| |||||||| || || ||||| | |||
Sbjct 6777 CGAAGAAGTCGGTCTTGGTTTCGGTGAAGTTGTCGGCGTAGGCCTTGATCCACGGCATCA 6836
Query 38116 AATTTTCTGT-ATGACCTTGATACATTGGTTGGAGACCTAGCATCCCTAACATTTTATTA 38174
|| || || || | || |||| | | || || ||||| || ||| || ||
Sbjct 6837 CGTTGTCGGTGGTGTCGCTG-TACAGGCGCTCGATGCCGAGCATGCCGGCCATCTTGTTG 6895
Query 38175 GCACGATATTTTACATAGTCTAACATTTCTTCCACATCAATTCCTTCAATGCCTTGTAGT 38234
|| || || || || ||| | ||| || ||||| || || || || || || | ||
Sbjct 6896 GCGCGGTACTTCACGTAGCGCACCATCTCGTCCACGTCGATGCCGTCGATACCGTCCAGC 6955
Query 38235 ACCTCACTAGACCA-TGCTTGTTCTAGCTCTACAGCATGTCTAAAAGAAGCATACACGTA 38293
||||| ||||| ||| | || ||||| | || ||| || || | ||||||
Sbjct 6956 ACCTCCGACGACCACTGCGT-CTCCAGCTCGATCGCGTGTTCGAATGATTGGTGCACGTA 7014
Query 38294 GTCATTTAGTTCATCTGTTTGTAGTTCAGGGTTTTCCCCTACAATAGCTCTAATTAGCTC 38353
| | | || || | || || || |||||||| || || | || || | || | |||
Sbjct 7015 GGCGGTCAGCTCGTTGGTCTGCAGCTCAGGGTTCTCGCCGATGATGGCGCGGATCAACTC 7074
Query 38354 AGAAATAAACTTCGAATGGGCTAACTCATCACGATTAATGAAGCTAATGATTTTACCTGT 38413
|| ||||| | ||| || | ||| || || || |||||||| ||||| || || ||
Sbjct 7075 GCTGATGAACTTGGTATGCGCCAGCTCGTCGCGGTTGATGAAGCTGATGATCTTGCCGGT 7134
Query 38414 TCCCGTCATCTTGTTTTGACGAACAAGGTTATAGAAGTAAGCAAAACCGCTGTAGAAATT 38473
|| |||| ||| || || || | ||| |||||||| || |||||| ||||| ||
Sbjct 7135 GCCGTTCATGCGGTTCTGCCGCACCATGTTGTAGAAGTAGGCGAAACCGGAATAGAAGTT 7194
Query 38474 AATACCCTCTAAGATAGATGATTGTACTAAAGCTTTTACCATATTCTCAGGTGTTTTGTT 38533
|| || || | ||| || || || | | | || | || |||| | || || |
Sbjct 7195 GATGCCTTCCAGGATCGAGGACTGGATCAGCGACTTCAGCAGGGTCTCGGCGGTCTTCTC 7254
Query 38534 ATTCATGAAATCGTCATAAGACTTCATAATAGGTGCATTACGTTTAATAATCGTAGGGTG 38593
|||||| |||||||| | ||| || ||||| || || || || || || |||||
Sbjct 7255 GCGCATGAAGTCGTCATACGCGCCCATGATCGGTGCGTTGCGCTTGATGATGGTCGGGTG 7314
Query 38594 TGTTCTAGCTTCCTCAAATACTCGATTCTGCTCTTGTAAGTTAGTAATAGAAGCAAGTAC 38653
|| | || ||| || | || ||||| | | | || || || || || || ||
Sbjct 7315 GGTGCGGGCGATCTCGAAGATGCGGTTCTGGTTCGGCAGGTCGGTGATCGAGGCCAGCAC 7374
Query 38654 ATAAGAATAACTCTCATTATGAATAGCTTCTTGTTGTGCAATAATAGCTGTAATAGCATG 38713
|| || ||||| || || || |||| || || | || || |||| | | |||||
Sbjct 7375 GTAGCTGTAGCTCTCGTTGTGGATCACTTCCTGCTGGCCGATGATCGCTGCATTGGCATG 7434
Query 38714 AACAGAGGCATCACTGACATACTCTGCGATATTATAAATAAAACGTGTTTGGGGTGAGTC 38773
| | | || | | ||||| || | || || || || || || || ||||||||
Sbjct 7435 CGCCGCTGGGTCGGTAATGTACTCGGCCACGTTGTAGATGAAGCGGGTCTGCGGTGAGTC 7494
Query 38774 AAGTGTAGCTAAAAGTCCGATAATGGAGTCAAACGCATATTTCTCTTCTTCGGATAAGTG 38833
|| || || | || ||||| || ||||| | || | || || | || | |
Sbjct 7495 GAGCGTGGCGAGCAGGCCGATGATCGAGTCGTAGGCGTTCTTTTCGCGTGCGTTGAGCTC 7554
Query 38834 GTTGTACTGTTTGGCATCGCTCTTCATATCTACCTCATCAGGCAACCAGTAATTTGTAGT 38893
| |||||| ||||||| |||||| || ||||| || || | |||| | || || |
Sbjct 7555 GCCGTACTGGCGGGCATCGAGCTTCATGTCGACCTCGTCGGGAATCCAGAAGTTGGTCGA 7614
Query 38894 TAACTCTTTGTAAGCTCGATAGAAAGATGGATACCGAATATCGTTCCAGTTTACGATACC 38953
| ||| ||||| || |||||||| || || ||| |||| ||||||||||| | ||| ||
Sbjct 7615 CAGCTCCTTGTAGGCCCGATAGAACGACGGGTACGGAATGTCGTTCCAGTTGAGGATGCC 7674
Query 38954 ACT 38956
||
Sbjct 7675 GCT 7677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422044127363187
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |