Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_024365.1
Length=51090
Score E
Sequences producing significant alignments: (Bits) Value
seq9587 167 8e-37
>seq9587
Length=50143
Score = 167 bits (184), Expect = 8e-37
Identities = 243/343 (71%), Gaps = 14/343 (4%)
Strand=Plus/Minus
Query 32780 GCGGAACAGTTCGAACTGCAGCAGGCCGCCAATCAGGCCCTGGCCATCGCCGCGCCCAAA 32839
|| || ||| |||| | ||||||||||||| |||||| | ||||| |||||
Sbjct 20956 GCCGAGCAGATCGAGCAGCAGCAGGCCGCC---------CTGGCCCTGGCCGCTCCCAAG 20906
Query 32840 GCCGAGTTCGTAGACAAGTACGTCGAGTCCACCGGCCTCAAGGGCTTCCGTCAAACCGCC 32899
||||||| || ||| ||||| | ||| |||| ||||||||||| || |||
Sbjct 20905 GCCGAGTATGTGGACCGCTACGTGGCCGCCAACGGCGCGAAGGGCTTCCGCCAGGTGGCC 20846
Query 32900 AAGCTGCTGGGTGCTAATGAGGCCCGCTTCCGCGAGTTCCTGCTTGATCGCCGGATCATG 32959
||||||||||| || || ||| ||||||| | |||| || |||||||
Sbjct 20845 AAGCTGCTGGGCGCGAACGAGCATGAGTTCCGCGCCTGGCTGCAGGACGAAAAGATCATG 20786
Query 32960 TACCGCATGGGCGGGGAATGGCAGGCCTACCAGAACCACGTTGACGCAGGCCGCTTTGAA 33019
|||||| ||||||| |||||| || ||||| |||| | ||||| ||||||||||
Sbjct 20785 TACCGCCTGGGCGGCGAATGGACTGCGCACCAGTGCCACATCGACGCTGGCCGCTTTGTC 20726
Query 33020 GTGAAGACCGGC----ACCACTGACGGCGGGCACGCATTCAACCAAGCCAAATTCACCCC 33075
|||||||| ||| |||| | | || ||||| |||||| | || ||||||||
Sbjct 20725 GTGAAGACTGGCGTGGCCCAC-GTCAACGATCACGCCTTCAACGCCACGAAGTTCACCCC 20667
Query 33076 CAAGGGCGTCAACTGGATTGCCGGTCTGTGGGCTCAGTACAAG 33118
||||||||| || ||| | ||||| ||||||| ||| || ||
Sbjct 20666 CAAGGGCGTGAATTGGGTGGCCGGCCTGTGGGGCCAGCACCAG 20624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163337185901416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |