Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_025426.1
Length=140807
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 86.0 6e-12
>seq11759
Length=158816
Score = 86.0 bits (94), Expect = 6e-12
Identities = 219/329 (67%), Gaps = 7/329 (2%)
Strand=Plus/Plus
Query 73686 TAAAGTAGTAATCAGACCTGATAGTGGAGACCCTGTTAAGATTATTTGTGGTGACCCTGA 73745
|||| | || || | ||||| ||| || ||||| || || ||||| |||||||||||
Sbjct 60740 TAAATTGGTTTTCCGTCCTGACTCTGGTGATCCTGTAAAAATCATTTGCGGTGACCCTGA 60799
Query 73746 TGCAGATACTG--AGT-ATGAACGTAAAGGTGCTGTAGAAGTACTTTGGGATACTTTTGG 73802
|| || | | ||| | |||||| ||||| || | ||||| | |||||
Sbjct 60800 AGCTGAAATGGGCAGTCCAGCTTATAAAGGCGCTGTGCAATGTTTATGGGAAATCTTTGG 60859
Query 73803 AGGTACTGAAACTGAAAAAGGATATAAAGTACTAGATGAACATGTAGGATTAATCTATGG 73862
|| || ||||| || |||| |||||||| || |||| | ||| || || || |||||
Sbjct 60860 CGGAACCGAAACAGATCAAGGCTATAAAGTTTTAAATGAGCGTGTTGGTTTGATTTATGG 60919
Query 73863 TGATTCTATTAACTATGAGCGTGCTCAGCAAATTTGTGAGGGATTAAAAGCAAAAGGTTT 73922
||| || |||| | || |||||| | ||| | | || | |||| || || |
Sbjct 60920 TGACTCGATTACTTTGGAACGTGCTTTAAATATTGTTCAAGGGCTGGAAGCGAAGGGCTA 60979
Query 73923 TGCAAGTATTAACGTTGTATTAGGTGTAGGTAGTTTCTCTTAT--CAATTTAATACTCGT 73980
||| | ||| | || || || | ||||||| ||||| | ||||| || |||
Sbjct 60980 TGCTTCAAATAATCTGGTCTTTGGCATCGGTAGTTATACTTATAACTATTTA--ACACGT 61037
Query 73981 GATACTCATGGGTTTGCAATCAAAGCAAC 74009
|| || ||| |||||| | ||||| ||
Sbjct 61038 GACACATTTGGTTTTGCAGTTAAAGCCAC 61066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450369607589880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |