Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_025431.1
Length=45718
Score E
Sequences producing significant alignments: (Bits) Value
seq13452 183 9e-42
>seq13452
Length=61710
Score = 183 bits (202), Expect = 9e-42
Identities = 352/519 (68%), Gaps = 0/519 (0%)
Strand=Plus/Minus
Query 7923 GACGGTTCTGGCTGATCCTCCTTGGCGCTTTCAGAACAGCACAGGCAAAGTTGCACCAGA 7982
|||| |||| || ||||| || |||| ||||| ||| |||| ||||||||||| |||||
Sbjct 54075 GACGATTCTTGCCGATCCCCCGTGGCAATTTCAAAACCGCACCGGCAAAGTTGCGCCAGA 54016
Query 7983 GCACCGTCGCCTTAGCCGCTATGGCACGTTGTCGCTTCCAGAGATCGAGGCGTTGCCAGT 8042
|| || || |||| || ||||| || || | ||| || ||| |||| | || ||
Sbjct 54015 ACATCGCCGGCTTAATCGTTATGGGACTATGACCCTTGATGACATCAAGGCTCTCCCTGT 53956
Query 8043 TGCGGAGATCGTAAAAGAGCCATCTCATCTTTATCTATGGGTACCGAACGCCCTCCTGGC 8102
||| || ||| | | || ||||||||||||| ||||| ||||| || || || |
Sbjct 53955 TGCCGATGTCGCGGACAATCCGGCTCATCTTTATCTTTGGGTGCCGAATGCACTTTTGCC 53896
Query 8103 GGAAGGACTGTCCGTGATGGCGGCGTGGGGCTTCACATACAAATCGAACATCGTGTGGCA 8162
|||||| | ||| | ||| ||||| || ||| ||||| ||||| ||||||||
Sbjct 53895 GGAAGGTATCGAAGTGCTTCGGGCCTGGGGTTTTGAATATAAATCCAACATTGTGTGGCA 53836
Query 8163 CAAAATCCGCAAAGACGGCGGGTCAGACGGTCGCGGCGTCGGCTTTTATTTCCGGAATGT 8222
|||| | || || || ||||| || || || || || || || |||||||| |||||
Sbjct 53835 CAAAGTTCGAAAGGATGGCGGCAGCGATGGGCGAGGTGTAGGATTCTATTTCCGTAATGT 53776
Query 8223 GACCGAGATTATCCTGTTTGGGACAAAGGGAAAAAACGCCAGAACACTCGCACCCGGTCG 8282
||||| || |||| ||||| || ||| || | || ||| || || ||
Sbjct 53775 AACCGAACTTGTCCTTTTTGGCGTTCGTGGGAAAGGTGCTCGCACTCTCCAGCCAGGCCG 53716
Query 8283 CACCCAAGTGAACTACATCTCTTCGCAGAAGCGGGAGCACTCACGCAAACCAGATGAACT 8342
|| || || || | | || ||| || || ||||| ||||| ||||| ||| |
Sbjct 53715 GACTCAGGTCAATTTGCTGGCTACGCGCAAACGCGAGCATAGCCGCAAGCCAGACGAATT 53656
Query 8343 TTATCCAATCATCGAAGCGTGTTCGTCAGGCCCGTATCTGGAACTTTTTGGTCGCGGTAT 8402
||| ||| ||||||| || | || || |||||| | |||| || ||||
Sbjct 53655 CTATAATATCGTCGAAGCATGCAGTCCTGGTGCGAGACTGGAAATGTTTGCGCGTGGTAC 53596
Query 8403 TAGAAAGGGGTGGGCGACTTGGGGCAATCAAGCGGACGA 8441
| |||| ||| || | |||||||| || || || ||
Sbjct 53595 ACGTGAGGGATGGTCGGCGTGGGGCAACCAGGCTGATGA 53557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146149859985440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |