Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_026585.1 Length=60727 Score E Sequences producing significant alignments: (Bits) Value seq11405 91.5 6e-14 >seq11405 Length=110570 Score = 91.5 bits (100), Expect = 6e-14 Identities = 92/118 (78%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 44159 GATTGGGTGATCGTCGGCGGCGAGTCCGGCCGCGGCGCTCGGCCGATGCACCCCGACTGG 44218 || ||||||||||||||||||||| ||||| ||| || || || ||||| ||||||||| Sbjct 75391 GACTGGGTGATCGTCGGCGGCGAGAGCGGCCCCGGTGCGCGTCCCATGCATCCCGACTGG 75332 Query 44219 GCGCGGTCA--CTCCGGGACCAATGCCAGGCGGCCGGTGTGCCGTTCCTGTTCAAGCA 44274 |||| ||| || || ||||| ||| |||| | || | | ||| |||||||||| Sbjct 75331 GCGC--TCAGCCTGCGCGACCAGTGCGAGGCCGTGGGCACGGCCTTCATGTTCAAGCA 75276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194170071205262