Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_026589.1 Length=55832 Score E Sequences producing significant alignments: (Bits) Value seq11405 102 3e-17 >seq11405 Length=110570 Score = 102 bits (112), Expect = 3e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 46457 CTCGATTGGGTGATCGTCGGCGGCGAATCCGGCCCCGGCGCCCGGCCGATGCACCCCGAC 46516 || || |||||||||||||||||||| ||||||||| || || || ||||| |||||| Sbjct 75394 CTGGACTGGGTGATCGTCGGCGGCGAGAGCGGCCCCGGTGCGCGTCCCATGCATCCCGAC 75335 Query 46517 TGGGCGCGGTCGCTGCGCGATCAATGCCGGATCGCCGGTGTGCCGTTCCTGTTCAAGCAG 46576 ||||||| |||||||| || ||| | || || | | ||| ||||||||||| Sbjct 75334 TGGGCGCTCAGCCTGCGCGACCAGTGCGAGGCCGTGGGCACGGCCTTCATGTTCAAGCAG 75275 Query 46577 TGGGGTGAGTACCGGCCAGTC 46597 ||||| |||| || ||| || Sbjct 75274 TGGGGCGAGTGGCGACCAATC 75254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 178508872329852