Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq7041 93.3 5e-14 seq8280 84.2 2e-11 >seq7041 Length=191181 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 157440 TAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCAGGTTCGAGTCCTGC 157498 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 50773 TAGCTCAACTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCGCAGGTTCGAGTCCTGC 50831 >seq8280 Length=144189 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 157440 TAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCAGGTTCGAGTCCTGC 157498 |||||||| ||||||||||| | ||||||||||| | |||||||||||||||||||||| Sbjct 26039 TAGCTCAGCTGGATAGAGCATCCGCCTTCTAAGCGGACGGTCGCAGGTTCGAGTCCTGC 25981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559398680365800