Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq889 89.7 7e-13
>seq889
Length=2431656
Score = 89.7 bits (98), Expect = 7e-13
Identities = 193/284 (68%), Gaps = 10/284 (4%)
Strand=Plus/Minus
Query 14268 TGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATG-TA 14326
||| || | ||||| || ||||||||||| ||||| |||||||| | ||| | || |
Sbjct 2150988 TGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACACTTCAGCG--TGCTC 2150931
Query 14327 CG-GGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCA 14385
|| ||| ||| || | ||| ||| |||||| ||| ||| |||||| ||||
Sbjct 2150930 CGTGGATGCCTGGCTCTGTTCCCTACCACCCCAAGTATCACATCTCAGACATGACTGCCA 2150871
Query 14386 AGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACC 14445
| |||| | ||||||||||| | ||||||| ||| ||| | ||||| | ||
Sbjct 2150870 TCGCCAGGCTGGTCAAGTGGCAGGGCCACGAGGGAGATGTCAGCATGGGGGCACCTTATG 2150811
Query 14446 CGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGT 14505
| || ||| || ||||| | ||||||||||| | ||| |||| ||| || | |
Sbjct 2150810 CACCCTGCTCTGGAATCCATCAGCGGGCCATCTGCATTTATGGGGCCGGGGACCTGCACT 2150751
Query 14506 GG---CTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546
|| || ||| || ||||| || || |||||||| |||
Sbjct 2150750 GGATTCTCCAGA---ACCATCACCTCTTGGCAAACAAGTTTGAC 2150710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658615200579840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |