Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq12661 82.4 5e-11
>seq12661
Length=3984070
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||||||| ||||| | ||||| || || ||| ||| || || || || || |||||
Sbjct 2676682 GCCGCCTTGCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGA 2676623
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| || | | || || || ||||| || ||||| || | || ||| ||||| || ||
Sbjct 2676622 CAAAGTGAGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGACACTGCTGGTCAGGTGG 2676563
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| |||||||||||| ||| ||| | ||| || | | | ||||| | ||| |
Sbjct 2676562 GATGCCCTCCTTGTCTTGGAT-TTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGA 2676504
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | ||| || || || || || | || |||||||| ||||||||
Sbjct 2676503 CCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2676455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314671837184747
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |