Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_028659.1
Length=142987
Score E
Sequences producing significant alignments: (Bits) Value
seq8237 120 3e-22
>seq8237
Length=506431
Score = 120 bits (132), Expect = 3e-22
Identities = 209/300 (70%), Gaps = 8/300 (3%)
Strand=Plus/Plus
Query 101358 ATGAAAGTATATCTGGTAGGTGGCGCTGTTCGTGATGGTCTGCTGGGTCGTCCAGTTCAT 101417
||| |||| ||| | ||||| || || ||| | ||| | | || |||| ||| |||
Sbjct 173869 ATGCAAGTTTATTTAGTAGGCGGTGCCGTTAGAGATCATTTACTCGGTCATCCCTATCAC 173928
Query 101418 GACCGTGATTACGTGGTTGTGGGTGCAACACACGAAGAGATGATTGAAAAAGGTT-TCAC 101476
|| ||||| || ||||| || || || | || | | ||| |||||| |||
Sbjct 173929 GAAAAGGATTATGTTGTTGTTGGCGCTACGCCAGAGCAACTTCTTGCCCAAGGTTATCAA 173988
Query 101477 CCAGGTTGGCGCTGCTTTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCACT 101536
|| | |||| | |||||| |||| || ||||| |||| ||||||||||| || ||
Sbjct 173989 CCCG-TTGGGAAAGATTTCCCTGTGTTTTTACATCCCAAAACAAAAGAAGAATATGCCCT 174047
Query 101537 GGCCCGTACTGAGCGTAAAACTGGTGAAGGCCATACTGGCTTTGAGACCTTCTTCAGC-- 101594
|||||||||||||||||| | || | || || ||| |||||| || || | |
Sbjct 174048 AGCCCGTACTGAGCGTAAATCAGGACACGGTTATCATGGATTTGAG---TTTTTTACCGA 174104
Query 101595 -CCGGATGTAACTCTGGAAGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATGGC 101653
|| ||||| || | |||||||||||| ||||||||| | || |||||||| || ||
Sbjct 174105 TCCAGATGTCACCTTAGAAGAGGATTTAATTCGTCGTGACTTAACCATCAATGCCATTGC 174164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 457344294445080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |