Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_028667.1 Length=39593 Score E Sequences producing significant alignments: (Bits) Value seq9777 84.2 6e-12 >seq9777 Length=39614 Score = 84.2 bits (92), Expect = 6e-12 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 23915 GTGATGGACAACCAGCACCGCAAGATCGCCGGCTATCGCGAGTTGACTCAGGACGACATC 23974 || ||||| |||||||||||||||||| ||||||| ||||| ||| ||| ||| ||| Sbjct 24145 GTCATGGAAAACCAGCACCGCAAGATCACCGGCTACCGCGAACTGAGCCAGTCCGAGATC 24204 Query 23975 GACCTGATGAACCGTGTCAAGGCCGTAGGCGCGGAACTGCTGGC 24018 |||||||||||| ||||| | || | |||||||| ||| Sbjct 24205 GACCTGATGAACGAGATCAAGACGAAGGGTGAGGAACTGCAGGC 24248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126553364967690