Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_028773.1
Length=182145
Score E
Sequences producing significant alignments: (Bits) Value
seq9676 82.4 9e-11
>seq9676
Length=343241
Score = 82.4 bits (90), Expect = 9e-11
Identities = 174/260 (67%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 16896 TGGGTTAAAAACGAACGAACTGGAACACAATGTCTGACACTAATCAACGCCGATTTGGTC 16955
|||||| | || |||| || || | | ||||||||| | || || || ||| | |
Sbjct 84141 TGGGTTGAGAATAAACGGACGGGTAAAAGATGTCTGACCATCATTAATGCTGATCTCACC 84200
Query 16956 TATAATGTCGATCAGAACGAAGTTCCTATGGTAACAACTCGCAAAACATTTTATCGCGGC 17015
||| |||| || | | |||| | || || || || |||| ||||||
Sbjct 84201 TATGATGTTGAAAATGGTGTTTTTCCACTAGTCACCACCCGTAAAAGCTTTTATAAATCG 84260
Query 17016 GCTATTGCTGAACTGCTTGGATATCTACGAGGATACGACAATGCTGCCGATTTTCGAGCC 17075
|||||||||||| ||||||| ||| | || || ||||| ||||| || |||||| ||
Sbjct 84261 GCTATTGCTGAAATGCTTGGCTATTTGCGTGGTTACGATAATGCGGCAGATTTTAGAAAG 84320
Query 17076 ATAGGTTGTAACACATGGAATGCTAACGCCAACGAAAACGAAGCTTGGTTGAAGAATCCC 17135
||| | ||| ||| |||| || |||||||| || ||| ||||| |||||
Sbjct 84321 GCAGGCACCACCACTTGGGATGCCAATGCCAACGACAATCAAGACTGGTTAGCCAATCCA 84380
Query 17136 AATCGTAAAGGTGAGGACGA 17155
| ||||| || |||| ||
Sbjct 84381 TACCGTAAGGGGCAGGATGA 84400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582626307232200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |