Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq11548 232 2e-56 seq7823 214 6e-51 seq9683 187 8e-43 seq9689 176 1e-39 seq9026 163 9e-36 seq6714 163 9e-36 seq7278 140 1e-28 seq4285 116 1e-21 >seq11548 Length=62939 Score = 232 bits (256), Expect = 2e-56 Identities = 276/372 (74%), Gaps = 2/372 (1%) Strand=Plus/Minus Query 40045 CAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGGCCGAAGGTCCCGAT 40104 || ||||||| | | |||||||| | || ||| ||||| | |||||||| ||| Sbjct 8287 CATCACGCGGCCAGTGTCCTTCAGCACGGCGCGGGCCTTCAATTTACCGAAGGTGATGAT 8228 Query 40105 CTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTG-ACGTACCGGATGACCTCGCCGCGAC 40163 ||| ||||| | |||| || || |||| | || || || ||||| ||||||||||| | Sbjct 8227 CTGGGCGACATGGTCGCTGCCATATTTCT-GCTGCACATAGCGGATCACCTCGCCGCGCC 8169 Query 40164 GCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACC 40223 || || ||||||||| || | |||||||||||| ||||| || ||||||||||| | Sbjct 8168 GCGTTTCGCAGAAGTCGATATCGAAGTCGGGCATGGAAACGCGTTCCGGGTTCAGGAAGC 8109 Query 40224 GCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGA 40283 ||||||| | || || | | ||| || ||||| || ||||| || |||||| Sbjct 8108 GCTCGAACAGCAGGCCCAGTTGCAGCGGGTCGAGATCAGTGATGGTCAGCGCCCAGGCGA 8049 Query 40284 CCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCTCCTTGGCCC 40343 ||||||| ||||| |||| || || || ||||| ||| | | | |||||||||| Sbjct 8048 CCAGCGATCCGGCACCCGAACCACGGCCCGGACCCACCGGAATATCATGATCCTTGGCCC 7989 Query 40344 AGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCATCTGGATGATCATGT 40403 | |||||||||||| |||| |||||||||| |||||||||||||||||||| |||| Sbjct 7988 ATTTGATGAAGTCGGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTGGATGATGATGT 7929 Query 40404 CGATCTCGTACT 40415 | || ||| ||| Sbjct 7928 CCATTTCGAACT 7917 Score = 95.1 bits (104), Expect = 4e-15 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 39231 TCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAGGA 39290 |||||||||||||||| || ||||| |||||||| | ||| || |||||| || |||| Sbjct 9056 TCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCGTCGCCAAGCGAGTAGCCGGCCAGGA 8997 Query 39291 TCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGTACGTCGGGTCCAGGA 39350 ||||||| |||| | |||||| ||||| |||| || || || || || || |||| Sbjct 8996 TCTGCGCGGCCTGCATCACCTGTTCCTGATAGACGAAGATGCCATAGGTTTCTTCGAGGA 8937 Query 39351 TC 39352 || Sbjct 8936 TC 8935 >seq7823 Length=199163 Score = 214 bits (236), Expect = 6e-51 Identities = 243/324 (75%), Gaps = 4/324 (1%) Strand=Plus/Plus Query 40090 GCCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGAT 40149 ||||||||| |||||| |||||| |||| | |||||||| || |||||| ||| Sbjct 171064 GCCGAAGGTGATGATCTGGGCGACCCGGTCGTCGCCGTACTTGTCCTGGACGTAGGCGAT 171123 Query 40150 GACCTCGCCGCGACG--CCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGC 40207 |||||| |||| || || | || |||||||||||| | ||||||||| ||||| ||| Sbjct 171124 GACCTCTTCGCGGCGTTCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGACACCCGC 171181 Query 40208 TCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATC 40267 ||||||||||||||||||||||| | || ||| | ||| |||||||| | |||||| Sbjct 171182 TCGGGGTTCAGGAACCGCTCGAACAGCAGGCCGAACCGCAGCGGATCGAGATTGGTGATG 171241 Query 40268 CCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACG 40327 ||| |||||||||||| || ||||| |||| || ||||| || || || | | Sbjct 171242 GTCAGGGCGTAGGCGACCAGAGAGCCGGCGCCCGAACCCCGCCCGGGCCCCACGGGGATG 171301 Query 40328 CCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCC 40387 |||| ||||||||| ||||||||| | |||| ||||||||| || |||||| Sbjct 171302 CCGTGGGTCTTGGCCCACTTGATGAAGTCCGAAACGATCAGGAAGTAACCGGGAAAGCCC 171361 Query 40388 ATCTGGATGATCATGTCGATCTCG 40411 |||| ||| | |||||||||| Sbjct 171362 ATCTTCTGGATGACGTCGATCTCG 171385 Score = 125 bits (138), Expect = 2e-24 Identities = 95/112 (85%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 39229 CTTCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAG 39288 ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || || Sbjct 170248 CTTCTTCTTGCCCATGGCCCGGCGCAGCAGGTCGGCCTCGCCCAGGCTGTAGCCCGCCAG 170307 Query 39289 GATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGTACGTC 39340 |||||| || || | |||||| ||||| |||| ||||| ||||| ||| Sbjct 170308 GATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATGACGCCGTAGGTC 170359 >seq9683 Length=137075 Score = 187 bits (206), Expect = 8e-43 Identities = 271/378 (72%), Gaps = 6/378 (2%) Strand=Plus/Minus Query 40041 TGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGGCCGAAGGTCC 40100 |||||||||||||| || |||| || || |||||| || ||||||||| Sbjct 109702 TGTCCAGCACGCGGCCCACGTCGCGGATGGCCGCGCGCGCGGCCATGGTGCCGAAGGTGG 109643 Query 40101 CGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATGACCTCGCCGC 40160 ||||||| ||| |||| |||||| || | || || |||||| | ||| Sbjct 109642 CGATCTGGCTGACGGCGTCGCGGCCGTACAGCTGCTTCACATAGTCGATGACGCGGTCGC 109583 Query 40161 GAC--GCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAG 40218 | ||| | || |||||| | ||| | ||||||||||||||| |||||||| || || Sbjct 109582 GGTTGGCCTGGCA--GAAGTCCACGTCGAAGTCGGGCATGGACACACGCTCGGGATTGAG 109525 Query 40219 GAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTA 40278 ||| |||||||| | || || ||||| || || ||||| |||||| ||| ||| Sbjct 109524 GAAACGCTCGAACAGCAGGTTGTATTCCAGCGGGTCCAGGTCCGTGATCTTGAGCACGTA 109465 Query 40279 GGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGAC-CCACACGCCGTTCTCCT 40337 ||| |||||||| ||||| |||| || || || ||||| || ||| |||||| || Sbjct 109464 GGCCACCAGCGAGCCGGCGCCCGATCCGCGGCCCGGACCCACGGGACA-GCCGTTGAGCT 109406 Query 40338 TGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCATCTGGATGA 40397 ||||||| |||||||||| | |||| ||||||||| ||| |||||||||| || || Sbjct 109405 TGGCCCACTTGATGAAGTCGCCCACGATGAGGAAGTAGCCCGGAAAGCCCATCTTGAGGA 109346 Query 40398 TCATGTCGATCTCGTACT 40415 | || |||||||| ||| Sbjct 109345 TGGTGCCGATCTCGAACT 109328 Score = 127 bits (140), Expect = 7e-25 Identities = 215/310 (69%), Gaps = 6/310 (2%) Strand=Plus/Minus Query 39033 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGCCCGTACGCCG 39092 ||||||||| ||||||| |||||| | |||||| | ||||| | ||| ||| || | Sbjct 110713 ACTCGGCCGTGTAGTGCACCTTCAGCCAGGCCGTGTGATAGGCCAGCAGCGAGTAGGCGG 110654 Query 39093 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCT 39152 | | ||||| |||||||||| |||| || ||||| | | || ||| | ||| | | Sbjct 110653 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAGGTCGAAGACCTCGT 110594 Query 39153 GGATGGCGCTGTCCGAGTAG---CCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACT 39209 | || | ||| | | || ||| | ||| |||| ||||| || || | Sbjct 110593 CG---GCCTTTTCCTCGCTGATGCCCTGCTTGGCCGCGCCCTCGCGGAAGATCCCGCGGT 110537 Query 39210 CCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGGC 39269 | || ||| ||||| |||||||||||||||||| || |||| |||||||| || Sbjct 110536 GCATGACCATTTCCTCGACCTTCTTCTTGCCCATGGCACGGCGCAAGAGGTCGGCGCCGC 110477 Query 39270 CCAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 39329 |||| |||||| | || | ||| || | || | ||||||||||||||||| |||| Sbjct 110476 CCAGCGAGTAGCCGCCCAGCACCTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGA 110417 Query 39330 GCCCGTACGT 39339 |||||| || Sbjct 110416 TCCCGTAGGT 110407 >seq9689 Length=17130 Score = 176 bits (194), Expect = 1e-39 Identities = 237/328 (72%), Gaps = 4/328 (1%) Strand=Plus/Minus Query 40090 GCCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGAT 40149 |||| |||| |||||| ||| ||| ||||||||| | |||||| ||| Sbjct 9353 GCCGTAGGTGATGATCTGGCTGACGCGCTCGCGCCCGTACTTGCGCGCGACGTAGTCGAT 9294 Query 40150 GACCTCGCCGCGACGCCGGTCATC--GAAGTCGATGTCAACGTCGGGCATGGACACGCGC 40207 |||||| |||| || | ||| |||||||||||| | ||||||||| |||||||| Sbjct 9293 CACCTCGTCGCGGCG--GTCCATGCAGAAGTCGATGTCGAAGTCGGGCATCGACACGCGT 9236 Query 40208 TCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATC 40267 ||||| || ||||| |||||||| | || || | ||| || || || ||||||||| Sbjct 9235 TCGGGATTGAGGAATCGCTCGAACAGCAGGTTGTACGGCAGCGGGTCCAGATCGGTGATC 9176 Query 40268 CCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACG 40327 || | || |||||||||||||| |||| || || || || |||| | | | Sbjct 9175 TTCAGCGCCCACGCCACCAGCGAACCGGCACCCGAACCACGGCCCGGGCCGATCGGAATG 9116 Query 40328 CCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCC 40387 || | | |||| |||| |||||||||||| |||| |||||||||| |||||||||| Sbjct 9115 CCCTGGTTCTTGCCCCACTGGATGAAGTCGGCCACGATCAGGAAGTAGCCCGGGAAGCCC 9056 Query 40388 ATCTGGATGATCATGTCGATCTCGTACT 40415 |||| |||||| ||| || |||| ||| Sbjct 9055 ATCTTGATGATGGTGTTGAGCTCGAACT 9028 Score = 140 bits (154), Expect = 1e-28 Identities = 241/347 (69%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 39009 CCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGC 39068 |||||| ||| |||||||||| |||| ||||||||||| |||||| |||| || Sbjct 10443 CCGAGGACAGCGTGGCCGCCATGAACTCAGCCGGGTAGTGGCGCTTCAGCCACGCGGTCT 10384 Query 39069 GGTAGGCGATGAGCCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGG 39128 ||||| || || | || || || | ||||| |||||||||| |||| |||||||| Sbjct 10383 GGTAGCTGACCAGTGCATAGGCAGCGGCGTGCGACTTGTTGAAGCCGTAACCGGCGAACT 10324 Query 39129 GTACGAGCACGTCCCACACCGCCTGGA---TGGCGCTGTCCGAGTAGCCTCGCTCGCGCG 39185 | | || ||| | | ||| | | |||| |||| | | || | || || Sbjct 10323 TCTCCATCAGGTCGAAGATCGCATCGGCCTTGGCTTCGTCCAC--ACCGTCCTTGGC-CG 10267 Query 39186 CTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGG 39245 | || | ||||| || || | |||||||| | | ||| |||||||||||| | Sbjct 10266 CACCTTCGCGGAAGATCTCGCGGTGCTTGGCCATTTCGGCCGGCACCTTCTTGCCCATCG 10207 Query 39246 CCCGACGCAGCAGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCT 39305 | || |||||||||||||| |||||| |||||| ||| |||||||||| || | Sbjct 10206 CGCGGCGCAGCAGGTCGGCGCCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCA 10147 Query 39306 GCACCTGCTCCTGGTAGATGATGAGCCCGTACGTCGGGTCCAGGATC 39352 ||||||||||||||| | |||| ||||| || | ||||||| Sbjct 10146 TCACCTGCTCCTGGTACACCATGATGCCGTAGGTGTCCTTCAGGATC 10100 >seq9026 Length=54586 Score = 163 bits (180), Expect = 9e-36 Identities = 262/374 (70%), Gaps = 12/374 (3%) Strand=Plus/Plus Query 40075 GCGCGCCTTGATCCGGCCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTC 40134 ||| |||| || | |||||||| |||||| || || |||| ||||||||||| Sbjct 21660 GCGAGCCTGGAGCGAACCGAAGGTGATGATCTGGGCCACGCGGTCGCGGCCGTACTTCTC 21719 Query 40135 GGTGACGTACCGGATGACCTCGCCGCGACGC--CGGTCATCGAAGTCGATGTCAACGTCG 40192 || || ||| ||||| |||||||| | | || |||||||| ||| | |||| Sbjct 21720 CTGAACATAGGAGATCACCTCTTCGCGACGCTCCTGGCA--GAAGTCGACGTCGAAGTCG 21777 Query 40193 GGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGA 40252 ||||| || || || ||||| || |||||||||||||| | || || ||| || Sbjct 21778 GGCATCGAAACCCGTTCGGGATTGAGGAACCGCTCGAACAGCAGACCAAAGCGCAGCGGG 21837 Query 40253 TCGAGGTCGGTGATCCCGAGGCAGTA----GGCGACCAGCGAACCGGCTGCCGAGCCTCG 40308 || ||||||||||| | ||||| |||||||||||| ||||| ||||||| || Sbjct 21838 TCCAGGTCGGTGATG----GTCAGTACCCAGGCGACCAGCGACCCGGCGCCCGAGCCCCG 21893 Query 40309 CCCAGGACCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAG 40368 || || ||||| | |||| | |||| |||| |||||| || | |||| ||| Sbjct 21894 TCCGGGGCCGACGGGAATACCGTGCGCCTTACCCCATTTGATGAAATCCGACACGATCAG 21953 Query 40369 GAAGTAGGACGGGAAGCCCATCTGGATGATCATGTCGATCTCGTACTGGAGCTGCTTGCC 40428 ||||||| ||||||||||||| ||| ||| ||| |||| | | |||| | || | Sbjct 21954 GAAGTAGCCGGGGAAGCCCATCTTCTCGATGATGCCGAGCTCGAAATCGAGCCGTTTCCA 22013 Query 40429 GTGCTCGTAGTCGG 40442 || ||| | |||| Sbjct 22014 GTACTCTTCCTCGG 22027 Score = 107 bits (118), Expect = 6e-19 Identities = 91/112 (81%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 39229 CTTCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAG 39288 |||||||||||||||||| || ||||| |||||||| | ||||||||||||||| || || Sbjct 20859 CTTCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCTTCGCCCAGGCTGTAGCCCGCCAG 20918 Query 39289 GATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGTACGTC 39340 ||||| || || | |||||| ||||| |||| ||||| ||||| ||| Sbjct 20919 AATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATGACGCCGTAGGTC 20970 >seq6714 Length=1758414 Score = 163 bits (180), Expect = 9e-36 Identities = 236/330 (72%), Gaps = 10/330 (3%) Strand=Plus/Plus Query 40091 CCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATG 40150 |||||||| ||||||| |||||| |||| ||||| || | ||||| ||||| Sbjct 59287 CCGAAGGTGATGATCTGTCCGACCTGGTCGCGGCCGTATTTGGCCTGTACGTAGCGGATC 59346 Query 40151 ACCTCGCCGCGACG--CCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCT 40208 ||||| |||| || || | || |||||||||||| | ||||||||| || ||||| | Sbjct 59347 ACCTCTTCGCGGCGATCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGAGACGCGGT 59404 Query 40209 CGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCC 40268 |||| || ||||| |||||||| | ||| | ||| ||||||| |||||||| Sbjct 59405 CGGGATTAAGGAAGCGCTCGAACAGCAGCGAGAAGCGCAGCGGATCGACATCGGTGATGA 59464 Query 40269 CGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGC 40328 || |||||| ||||||||||| || ||||||| || || || ||||| | | Sbjct 59465 GAAGCGCGTAGGCAACCAGCGAACCCGCACCCGAGCCACGGCCCGGGCCGACAGGAATGT 59524 Query 40329 CGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCA 40388 | | | ||||||||| ||||||||| | |||| |||||| ||| ||||| || Sbjct 59525 CATGTTGCTTGGCCCATTTGATGAAGTCCGACACGATCAGGAAATAGCCGGGGAACTTCA 59584 Query 40389 T---CTGGATGATCATGTCGATCTCGTACT 40415 | ||||||| ||| |||||||| ||| Sbjct 59585 TGCGCTGGATG---ATGCCGATCTCGAACT 59611 >seq7278 Length=293576 Score = 140 bits (154), Expect = 1e-28 Identities = 245/352 (70%), Gaps = 6/352 (2%) Strand=Plus/Plus Query 40035 AGGGCTTGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGGCCGA 40094 ||||| | |||||||||||| | |||| || ||| ||||||| | | |||| Sbjct 266443 AGGGCATTTCCAGCACGCGGCCGACGTCGCGCAAAGCGGCACGCGCCTGCAGCGAACCGA 266502 Query 40095 AGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATGACCT 40154 |||| |||||| || |||| || || || || | || || ||||| |||| Sbjct 266503 AGGTGATGATCTGCGCCACCTGCTCACGGCCATATTTGGCCTGCACATAGCGGATCACCT 266562 Query 40155 CGCCGCGACG--CCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGG 40212 | |||| || || | || ||||||||| || | ||||||||| || ||||| || || Sbjct 266563 CCTCGCGGCGATCCTGGCA--GAAGTCGATATCGAAGTCGGGCATCGATACGCGTTCAGG 266620 Query 40213 GTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAG 40272 || ||||| || ||||| | ||| | ||| ||||||| |||||||||| || Sbjct 266621 ATTGAGGAAGCGTTCGAATAGCAGCGAGAAACGCAGCGGATCGACGTCGGTGATCGTCAG 266680 Query 40273 -GCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGT 40331 ||| || ||||| ||||| ||||| |||| || || || || || ||| | | | | Sbjct 266681 CGCA-TAAGCGACGAGCGAGCCGGCACCCGAACCACGGCCCGGGCCAACCGGAATGTCAT 266739 Query 40332 TCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAA 40383 || ||||||||| |||||||||||| |||| ||||| ||| ||||| Sbjct 266740 GCTGCTTGGCCCATTTGATGAAGTCGGCAACGATGAGGAAATAGCCGGGGAA 266791 >seq4285 Length=661 Score = 116 bits (128), Expect = 1e-21 Identities = 112/143 (78%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 39198 AGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAGCA 39257 |||||||| | |||||||| |||||| ||||||||||||||||||||| ||||||| Sbjct 425 AGTTCACGG--TGCTTGGCCATTTCCTCGGCCTTCTTCTTGCCCATGGCCCGGCGCAGCA 482 Query 39258 GGTCGGCCTGGCCCAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTCCT 39317 |||||| ||||| ||||||| ||| | ||||||| || | ||||||||||| Sbjct 483 AGTCGGCGCCACCCAGCGAGTAGCCACCGATCACCTGCGCCATCTGCATCACCTGCTCCT 542 Query 39318 GGTAGATGATGAGCCCGTACGTC 39340 |||||| |||| ||||| ||| Sbjct 543 GGTAGACCATGATGCCGTAGGTC 565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160377715225266