Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_028832.1 Length=61511 Score E Sequences producing significant alignments: (Bits) Value seq9463 113 2e-20 >seq9463 Length=63583 Score = 113 bits (124), Expect = 2e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 54586 CGCCAGCATGCCGTTCGTGTATCCGCACGTCGCACTCATGCCCGACGCACATTTCGGCAA 54645 ||||||| |||||||| | | |||||| || | |||||||||| || | |||| Sbjct 40950 CGCCAGCCTGCCGTTCATCCACAAGCACGTGGCGGTGATGCCCGACGTGCACTGGGGCAT 40891 Query 54646 AGGCAGCTCGGTCGGCACAGTCATCCCCACCCAAGGCGCCGTCATCCCGGCCGCCGTCGG 54705 ||| | | |||||| | |||||||| ||| || || |||||||||| || ||||| Sbjct 40890 GGGCGCCACCGTCGGCTCGGTCATCCCGACCGTCGGGGCGATCATCCCGGCGGCGGTCGG 40831 Query 54706 CGTCGACATCGGCTGCGGCATGATCGC 54732 |||||||||||||||||||||||| || Sbjct 40830 CGTCGACATCGGCTGCGGCATGATGGC 40804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196678422567534