Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_028843.1
Length=75816
Score E
Sequences producing significant alignments: (Bits) Value
seq9835 82.4 4e-11
seq8424 82.4 4e-11
>seq9835
Length=4128
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/60 (92%), Gaps = 1/60 (2%)
Strand=Plus/Minus
Query 66065 GGGATCGAACCCCGGACCCGCTGATTAAAAGTCAGCTGCTCTACCAACTGAGCTA-GCGC 66123
||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1897 GGGCTCGAACCTAGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAACTGAGCTATGCGC 1838
>seq8424
Length=263062
Score = 82.4 bits (90), Expect = 4e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 63275 TGTAGCGCAGCTTGGTAGCGCGCCTGATTTGGATTCAGGGGGTCGGAGGTTCAAATCCTT 63334
||||||||||| ||||||||| |||||||||| ||||||||||| |||||| ||||||
Sbjct 49880 TGTAGCGCAGCCTGGTAGCGCACCTGATTTGGGATCAGGGGGTCGCAGGTTCGAATCCTG 49821
Query 63335 CCA 63337
|||
Sbjct 49820 CCA 49818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242441896092123
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |