Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_028860.1
Length=52392
Score E
Sequences producing significant alignments: (Bits) Value
seq11622 93.3 1e-14
seq9910 82.4 3e-11
>seq11622
Length=276999
Score = 93.3 bits (102), Expect = 1e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 4056 GGTCAGTAGCTCAATTGGTAGAGCAGCGGTTTCCAAAGCCGCTCGTTGGGGGTTCGAGTC 4115
||||||||| |||||||||||||| |||| |||||| ||| ||||||||||||||||
Sbjct 89 GGTCAGTAGTTCAATTGGTAGAGCGTCGGTCTCCAAAACCGAATGTTGGGGGTTCGAGTC 148
Query 4116 CCTCCTGGCCTGCAAT 4131
||||||| ||||| ||
Sbjct 149 CCTCCTGACCTGCCAT 164
>seq9910
Length=308115
Score = 82.4 bits (90), Expect = 3e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 4056 GGTCAGTAGCTCAATTGGTAGAGCAGCGGTTTCCAAAGCCGCTCGTTGGGGGTTCGAGTC 4115
|| || ||||||||||||||||| | |||| |||||| ||| |||||||||||||| |
Sbjct 49798 GGCCAATAGCTCAATTGGTAGAGTATCGGTCTCCAAAACCGAGGGTTGGGGGTTCGAGAC 49739
Query 4116 CCTCCTGGCCTGC 4128
|||| ||||||||
Sbjct 49738 CCTCTTGGCCTGC 49726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 167502840842332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |