Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq11548 172 2e-38 seq7823 147 7e-31 seq9689 143 9e-30 seq9683 143 9e-30 seq7278 134 4e-27 seq6714 134 4e-27 seq9026 129 2e-25 seq4285 93.3 1e-14 >seq11548 Length=62939 Score = 172 bits (190), Expect = 2e-38 Identities = 263/372 (71%), Gaps = 2/372 (1%) Strand=Plus/Minus Query 38952 CAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCGCGAT 39011 || ||||||| | | |||||||| | || ||| ||||| | ||| | || ||| Sbjct 8287 CATCACGCGGCCAGTGTCCTTCAGCACGGCGCGGGCCTTCAATTTACCGAAGGTGATGAT 8228 Query 39012 CTGTGCGACCTTGTCACTGCCGTACTTCTCGGTG-ACGTACCGGATCACGTCGCCACGGC 39070 ||| ||||| | ||| ||||| || |||| | || || || |||||||| ||||| || | Sbjct 8227 CTGGGCGACATGGTCGCTGCCATATTTCT-GCTGCACATAGCGGATCACCTCGCCGCGCC 8169 Query 39071 GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACC 39130 | || ||||||||| || | |||||||||||| || || || ||||||||||| | Sbjct 8168 GCGTTTCGCAGAAGTCGATATCGAAGTCGGGCATGGAAACGCGTTCCGGGTTCAGGAAGC 8109 Query 39131 GCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGG 39190 ||||||| | || || | | | ||||| || || ||||| || || | ||| Sbjct 8108 GCTCGAACAGCAGGCCCAGTTGCAGCGGGTCGAGATCAGTGATGGTCAGCGCCCAGGCGA 8049 Query 39191 CCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCC 39250 ||||||| || || | || || || || || || ||| | | | ||||| |||| Sbjct 8048 CCAGCGATCCGGCACCCGAACCACGGCCCGGACCCACCGGAATATCATGATCCTTGGCCC 7989 Query 39251 AGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGT 39310 | |||||||||||| |||| |||||||| ||||| ||||||||| |||| |||| Sbjct 7988 ATTTGATGAAGTCGGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTGGATGATGATGT 7929 Query 39311 CGATCTCGTACT 39322 | || ||| ||| Sbjct 7928 CCATTTCGAACT 7917 Score = 98.7 bits (108), Expect = 3e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38138 TCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGA 38197 ||||||||||||||||||| || || |||||||| | || || | ||| |||||||||| Sbjct 9056 TCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCGTCGCCAAGCGAGTAGCCGGCCAGGA 8997 Query 38198 TCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGA 38257 ||||||| |||| | |||||| ||||| |||| || || || |||| || |||| Sbjct 8996 TCTGCGCGGCCTGCATCACCTGTTCCTGATAGACGAAGATGCCATAGGTTTCTTCGAGGA 8937 Query 38258 TC 38259 || Sbjct 8936 TC 8935 >seq7823 Length=199163 Score = 147 bits (162), Expect = 7e-31 Identities = 221/312 (71%), Gaps = 4/312 (1%) Strand=Plus/Plus Query 39009 GATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39068 |||||| |||||| ||| ||||||||| || |||||| ||| || || | || Sbjct 171076 GATCTGGGCGACCCGGTCGTCGCCGTACTTGTCCTGGACGTAGGCGATGACCTCTTCGCG 171135 Query 39069 GCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGG 39126 ||| | | || |||||||||||| | ||||||||| || || ||||| ||||||||| Sbjct 171136 GCGTTCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGACACCCGCTCGGGGTTCAGG 171193 Query 39127 AACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTAC 39186 ||||||||||| | || ||| | | || || || | |||||| |||||||| Sbjct 171194 AACCGCTCGAACAGCAGGCCGAACCGCAGCGGATCGAGATTGGTGATGGTCAGGGCGTAG 171253 Query 39187 GCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTC 39246 ||| |||| ||||| || | || || ||||| || || || | ||||| ||| Sbjct 171254 GCGACCAGAGAGCCGGCGCCCGAACCCCGCCCGGGCCCCACGGGGATGCCGTGGGTCTTG 171313 Query 39247 GCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATC 39306 ||||| ||||||||| | |||| |||||||| || || ||||||| | ||| Sbjct 171314 GCCCACTTGATGAAGTCCGAAACGATCAGGAAGTAACCGGGAAAGCCCATCTTCTGGATG 171373 Query 39307 ATGTCGATCTCG 39318 | |||||||||| Sbjct 171374 ACGTCGATCTCG 171385 Score = 109 bits (120), Expect = 2e-19 Identities = 262/391 (67%), Gaps = 18/391 (5%) Strand=Plus/Plus Query 38123 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGG 38182 ||| | |||| |||||||||||||||||| || || || |||||||||| || ||| Sbjct 170235 CCATCTCCTCCTTCTTCTTCTTGCCCATGGCCCGGCGCAGCAGGTCGGCCTCGCCCAGGC 170294 Query 38183 TGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGA 38242 |||| || ||||||||||| || || | |||||| ||||| |||| ||||| ||| Sbjct 170295 TGTAGCCCGCCAGGATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATGACGCCGT 170354 Query 38243 AGGTCGGGTCCAGGATCTCGGCCAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATCT 38302 ||||| | ||| | | |||||| | | || ||||| ||| || | Sbjct 170355 AGGTCTCGCGCAGCACCGGCTCCAGCGACGGGTGCA-----GGGTG--TCGACGGG---- 170403 Query 38303 CCTGCTGACCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCATGCCCATCGGACCCG 38362 | ||| | ||| ||||| | | || || ||| ||| || ||||||| |||| Sbjct 170404 CTTGC-GGCCGAACTTGCAGTCGACGAAG-CCGT---CGA--TGTTGTCCATCGGGCCCG 170456 Query 38363 GACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAACTGGTCCGGCTTCAGCAGGCGAA 38422 | ||||| |||| || | || | ||| ||||| | | | | || || | ||| | Sbjct 170457 GCCGGTAGAGCGAGATCAGCGCGGTGATCTCCTCCAGCGAGCCGGGGCGCATCTTGCGCA 170516 Query 38423 GCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGGGTGTCGCCCCTGGCCA 38482 | | |||||| | || ||||||||||| ||| || || | |||| ||| Sbjct 170517 GGGTGTCGCGCATGCCCTGGCTTTCGAGCTGGAACACCCCGACCGTCTGGCCCGACCCCA 170576 Query 38483 GCAGCTCGTAGGTTGCCGGGTCGTCCAGCGG 38513 |||||||||||| | | | ||||||||||| Sbjct 170577 TCAGCTCGTAGGTCGGCTGATCGTCCAGCGG 170607 >seq9689 Length=17130 Score = 143 bits (158), Expect = 9e-30 Identities = 210/295 (71%), Gaps = 4/295 (1%) Strand=Plus/Minus Query 39031 CCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTCATC--GAAGTCGA 39088 |||||||| | |||||| |||||| ||| | ||||| | ||| |||||||| Sbjct 9319 CCGTACTTGCGCGCGACGTAGTCGATCACCTCGTCGCGGCG--GTCCATGCAGAAGTCGA 9262 Query 39089 TGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGT 39148 |||| | ||||||||| || || || || || || ||||| |||||||| | || || Sbjct 9261 TGTCGAAGTCGGGCATCGACACGCGTTCGGGATTGAGGAATCGCTCGAACAGCAGGTTGT 9202 Query 39149 GAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAG 39208 || | |||||||| ||||||||| || || |||| ||||||| || || | | Sbjct 9201 ACGGCAGCGGGTCCAGATCGGTGATCTTCAGCGCCCACGCCACCAGCGAACCGGCACCCG 9142 Query 39209 AGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGA 39268 | || || || ||||||| | | ||| | | ||| |||| |||||||||||| | Sbjct 9141 AACCACGGCCCGGGCCGATCGGAATGCCCTGGTTCTTGCCCCACTGGATGAAGTCGGCCA 9082 Query 39269 CGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCTCGTACTC 39323 ||| |||||||| |||||| ||||||| | |||| ||| || |||| |||| Sbjct 9081 CGATCAGGAAGTAGCCCGGGAAGCCCATCTTGATGATGGTGTTGAGCTCGAACTC 9027 Score = 131 bits (144), Expect = 5e-26 Identities = 240/347 (69%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 37916 CCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGC 37975 |||||| ||| |||||||||| |||| ||||||||||| |||||| |||| || Sbjct 10443 CCGAGGACAGCGTGGCCGCCATGAACTCAGCCGGGTAGTGGCGCTTCAGCCACGCGGTCT 10384 Query 37976 GGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGG 38035 ||||| || ||| | || || || | ||||| |||||||||| |||| |||||||| Sbjct 10383 GGTAGCTGACCAGTGCATAGGCAGCGGCGTGCGACTTGTTGAAGCCGTAACCGGCGAACT 10324 Query 38036 GTACGAGCACGTCCCACACCGC-CCGG--ATGGCAGCCTCCGAGTAGCCTCGCTCGCTCG 38092 | | || ||| | | ||| ||| |||| | ||| | | || || | || Sbjct 10323 TCTCCATCAGGTCGAAGATCGCATCGGCCTTGGCTTCGTCC--ACACCGTC-CTTGGCCG 10267 Query 38093 CCCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGG 38152 | || | ||||| || || | |||||||| | | ||| |||||||||||| | Sbjct 10266 CACCTTCGCGGAAGATCTCGCGGTGCTTGGCCATTTCGGCCGGCACCTTCTTGCCCATCG 10207 Query 38153 CGCGACGGAGGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCT 38212 |||| || || |||||||| || || | ||| ||| | | |||||||||| || | Sbjct 10206 CGCGGCGCAGCAGGTCGGCGCCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCA 10147 Query 38213 GCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGATC 38259 ||||||||||||||| | |||| ||| |||| | ||||||| Sbjct 10146 TCACCTGCTCCTGGTACACCATGATGCCGTAGGTGTCCTTCAGGATC 10100 >seq9683 Length=137075 Score = 143 bits (158), Expect = 9e-30 Identities = 262/379 (69%), Gaps = 6/379 (2%) Strand=Plus/Minus Query 38948 TGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCG 39007 |||||||||||||| || |||| || || |||||| || ||| | || | Sbjct 109702 TGTCCAGCACGCGGCCCACGTCGCGGATGGCCGCGCGCGCGGCCATGGTGCCGAAGGTGG 109643 Query 39008 CGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCAC 39067 ||||||| ||| ||| | ||||||| || | || || ||| ||| | | | Sbjct 109642 CGATCTGGCTGACGGCGTCGCGGCCGTACAGCTGCTTCACATAGTCGATGACGCGGTCGC 109583 Query 39068 GGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAG 39125 || | | | || |||||| | ||| | |||||||||||| |||||||| || || || Sbjct 109582 GGTTGGCCTGGCA--GAAGTCCACGTCGAAGTCGGGCATGGACACACGCTCGGGATTGAG 109525 Query 39126 GAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTA 39185 ||| |||||||| | || || | ||||||||||| |||||| ||| |||| Sbjct 109524 GAAACGCTCGAACAGCAGGTTGTATTCCAGCGGGTCCAGGTCCGTGATCTTGAGCACGTA 109465 Query 39186 CGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGAC-CCACACGCCGTTCTCCT 39244 || |||||||||| || | || ||||| || || || || ||| |||||| || Sbjct 109464 GGCCACCAGCGAGCCGGCGCCCGATCCGCGGCCCGGACCCACGGGACA-GCCGTTGAGCT 109406 Query 39245 TCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGA 39304 | ||||| |||||||||| | |||| ||||||||| ||| || ||||||| | || Sbjct 109405 TGGCCCACTTGATGAAGTCGCCCACGATGAGGAAGTAGCCCGGAAAGCCCATCTTGAGGA 109346 Query 39305 TCATGTCGATCTCGTACTC 39323 | || |||||||| |||| Sbjct 109345 TGGTGCCGATCTCGAACTC 109327 Score = 125 bits (138), Expect = 2e-24 Identities = 231/337 (69%), Gaps = 9/337 (3%) Strand=Plus/Minus Query 37940 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 37999 ||||||||| ||||||| |||||| | |||||| | ||||| | || ||| || | Sbjct 110713 ACTCGGCCGTGTAGTGCACCTTCAGCCAGGCCGTGTGATAGGCCAGCAGCGAGTAGGCGG 110654 Query 38000 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCC 38059 | | ||||| |||||||||| |||| || ||||| | | || ||| | ||| | Sbjct 110653 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAGGTCGAAGACCTC-- 110596 Query 38060 GGATGGCAG---CCTCCGAGTAGCCTCGCTCGCTCGCCCCCTTCTGGAAGTTCACGAACT 38116 | ||| |||| | ||| ||| | ||| |||| ||||| || || | Sbjct 110595 -GTCGGCCTTTTCCTCGCTGATGCCCTGCTTGGCCGCGCCCTCGCGGAAGATCCCGCGGT 110537 Query 38117 CCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGAC 38176 | || ||| ||||| |||||||||||||||||| || || | ||||||||| | Sbjct 110536 GCATGACCATTTCCTCGACCTTCTTCTTGCCCATGGCACGGCGCAAGAGGTCGGCGCCGC 110477 Query 38177 CGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 38236 | || | ||| ||| |||| | ||| || | || | ||||||||||||||||| |||| Sbjct 110476 CCAGCGAGTAGCCGCCCAGCACCTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGA 110417 Query 38237 GCCCGAAGGTCGGGTCCAGGA---TCTCGGCCAGCGG 38270 |||| |||| | |||| | | ||| ||||||| Sbjct 110416 TCCCGTAGGTTTCGGCCAGCACCTTTTCGACCAGCGG 110380 >seq7278 Length=293576 Score = 134 bits (148), Expect = 4e-27 Identities = 236/342 (69%), Gaps = 4/342 (1%) Strand=Plus/Plus Query 38942 AGGGCTTGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGT 39001 ||||| | |||||||||||| | |||| || ||| ||||||| | | ||| Sbjct 266443 AGGGCATTTCCAGCACGCGGCCGACGTCGCGCAAAGCGGCACGCGCCTGCAGCGAACCGA 266502 Query 39002 ACGTCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGT 39061 | || |||||| || |||| |||| ||| || || | || || |||||||| | Sbjct 266503 AGGTGATGATCTGCGCCACCTGCTCACGGCCATATTTGGCCTGCACATAGCGGATCACCT 266562 Query 39062 CGCCACGGCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGG 39119 | | |||||| | | || ||||||||| || | ||||||||| || || || ||||| Sbjct 266563 CCTCGCGGCGATCCTGGCA--GAAGTCGATATCGAAGTCGGGCATCGATACGCGTTCAGG 266620 Query 39120 GTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAG 39179 || ||||| || ||||| | ||| | | | | || || | |||||||||| || Sbjct 266621 ATTGAGGAAGCGTTCGAATAGCAGCGAGAAACGCAGCGGATCGACGTCGGTGATCGTCAG 266680 Query 39180 GGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTT 39239 || || ||| | |||||||| || | || || || || ||||| ||| | | | | Sbjct 266681 CGCATAAGCGACGAGCGAGCCGGCACCCGAACCACGGCCCGGGCCAACCGGAATGTCATG 266740 Query 39240 CTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTA 39281 || ||| ||||| |||||||||||| |||| |||||| || Sbjct 266741 CTGCTTGGCCCATTTGATGAAGTCGGCAACGATGAGGAAATA 266782 >seq6714 Length=1758414 Score = 134 bits (148), Expect = 4e-27 Identities = 221/317 (70%), Gaps = 4/317 (1%) Strand=Plus/Plus Query 39009 GATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39068 ||||||| |||||| ||| | |||||| || | ||||| |||||||| || | || Sbjct 59298 GATCTGTCCGACCTGGTCGCGGCCGTATTTGGCCTGTACGTAGCGGATCACCTCTTCGCG 59357 Query 39069 GCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGG 39126 |||| | | || |||||||||||| | ||||||||| ||||| || || || || ||| Sbjct 59358 GCGATCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGAGACGCGGTCGGGATTAAGG 59415 Query 39127 AACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTAC 39186 || |||||||| | ||| | | | || || | |||||||| || ||||| Sbjct 59416 AAGCGCTCGAACAGCAGCGAGAAGCGCAGCGGATCGACATCGGTGATGAGAAGCGCGTAG 59475 Query 39187 GCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTC 39246 || ||||||| || || | ||||| || || |||||||| | | | | | ||| Sbjct 59476 GCAACCAGCGAACCCGCACCCGAGCCACGGCCCGGGCCGACAGGAATGTCATGTTGCTTG 59535 Query 39247 GCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATC 39306 ||||| ||||||||| | |||| ||||| || |||||| ||| | | ||| Sbjct 59536 GCCCATTTGATGAAGTCCGACACGATCAGGAAATAGCCGGGGAACTTCATGCGCTGGATG 59595 Query 39307 ATGTCGATCTCGTACTC 39323 ||| |||||||| |||| Sbjct 59596 ATGCCGATCTCGAACTC 59612 Score = 80.6 bits (88), Expect = 9e-11 Identities = 76/97 (78%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 38138 TCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGA 38197 ||||||||||||||||||| || | | ||||||||||||||| ||||| || || || Sbjct 58472 TCTTCTTGCCCATGGCGCGGCGCAACAAGTCGGCCTGACCGAGCGTGTAGCCCGCAAGCT 58531 Query 38198 TCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGAT 38234 ||||| || | |||||| |||||||||| ||| Sbjct 58532 CTTGCGCGATCTGCATCACCTGTTCCTGGTAGACGAT 58568 >seq9026 Length=54586 Score = 129 bits (142), Expect = 2e-25 Identities = 235/343 (69%), Gaps = 6/343 (2%) Strand=Plus/Plus Query 39009 GATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39068 |||||| || || ||| | |||||||||||| || || |||||| || | Sbjct 21687 GATCTGGGCCACGCGGTCGCGGCCGTACTTCTCCTGAACATAGGAGATCACCTCTTC--- 21743 Query 39069 GCGACGGTCATCG---AAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAG 39125 |||||| || | | ||||||| ||| | ||||||||| || || || || || || || Sbjct 21744 GCGACGCTCCTGGCAGAAGTCGACGTCGAAGTCGGGCATCGAAACCCGTTCGGGATTGAG 21803 Query 39126 GAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTA 39185 |||||||||||| | || || | | ||||||||||||||||| || | | Sbjct 21804 GAACCGCTCGAACAGCAGACCAAAGCGCAGCGGGTCCAGGTCGGTGATGGTCAGTACCCA 21863 Query 39186 CGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTT 39245 ||| ||||||| || || | ||||| || || |||||||| | |||| | |||| Sbjct 21864 GGCGACCAGCGACCCGGCGCCCGAGCCCCGTCCGGGGCCGACGGGAATACCGTGCGCCTT 21923 Query 39246 CGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGAT 39305 |||| |||||| || | |||| |||||||| ||||| ||||||| | ||| Sbjct 21924 ACCCCATTTGATGAAATCCGACACGATCAGGAAGTAGCCGGGGAAGCCCATCTTCTCGAT 21983 Query 39306 CATGTCGATCTCGTACTCGACCTGCGTGCGGTGCTCGTCGTCG 39348 ||| ||| |||| | |||| | | | | || ||| || ||| Sbjct 21984 GATGCCGAGCTCGAAATCGAGCCGTTTCCAGTACTCTTCCTCG 22026 Score = 95.1 bits (104), Expect = 4e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 38123 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGG 38182 ||| | |||| ||||||||||||||||||||| || || |||||||| | || ||| Sbjct 20846 CCATCTCCTCCTTCTTCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCTTCGCCCAGGC 20905 Query 38183 TGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGA 38242 |||| || ||||| ||||| || || | |||||| ||||| |||| ||||| ||| Sbjct 20906 TGTAGCCCGCCAGAATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATGACGCCGT 20965 Query 38243 AGGTC 38247 ||||| Sbjct 20966 AGGTC 20970 >seq4285 Length=661 Score = 93.3 bits (102), Expect = 1e-14 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 38105 AGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGA 38164 |||||||| | |||||||| |||||| |||||||||||||||||| || || || | Sbjct 425 AGTTCACGG--TGCTTGGCCATTTCCTCGGCCTTCTTCTTGCCCATGGCCCGGCGCAGCA 482 Query 38165 GGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCT 38224 |||||| ||| || | ||| || | | | ||||||| || | ||||||||||| Sbjct 483 AGTCGGCGCCACCCAGCGAGTAGCCACCGATCACCTGCGCCATCTGCATCACCTGCTCCT 542 Query 38225 GGTAGATGATGAGCCCGAAGGTC 38247 |||||| |||| ||| ||||| Sbjct 543 GGTAGACCATGATGCCGTAGGTC 565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159686638829538