Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_028892.1
Length=49949
Score E
Sequences producing significant alignments: (Bits) Value
seq11548 172 2e-38
seq7823 147 7e-31
seq9689 143 9e-30
seq9683 143 9e-30
seq7278 134 4e-27
seq6714 134 4e-27
seq9026 129 2e-25
seq4285 93.3 1e-14
>seq11548
Length=62939
Score = 172 bits (190), Expect = 2e-38
Identities = 263/372 (71%), Gaps = 2/372 (1%)
Strand=Plus/Minus
Query 38952 CAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCGCGAT 39011
|| ||||||| | | |||||||| | || ||| ||||| | ||| | || |||
Sbjct 8287 CATCACGCGGCCAGTGTCCTTCAGCACGGCGCGGGCCTTCAATTTACCGAAGGTGATGAT 8228
Query 39012 CTGTGCGACCTTGTCACTGCCGTACTTCTCGGTG-ACGTACCGGATCACGTCGCCACGGC 39070
||| ||||| | ||| ||||| || |||| | || || || |||||||| ||||| || |
Sbjct 8227 CTGGGCGACATGGTCGCTGCCATATTTCT-GCTGCACATAGCGGATCACCTCGCCGCGCC 8169
Query 39071 GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACC 39130
| || ||||||||| || | |||||||||||| || || || ||||||||||| |
Sbjct 8168 GCGTTTCGCAGAAGTCGATATCGAAGTCGGGCATGGAAACGCGTTCCGGGTTCAGGAAGC 8109
Query 39131 GCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGG 39190
||||||| | || || | | | ||||| || || ||||| || || | |||
Sbjct 8108 GCTCGAACAGCAGGCCCAGTTGCAGCGGGTCGAGATCAGTGATGGTCAGCGCCCAGGCGA 8049
Query 39191 CCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCC 39250
||||||| || || | || || || || || || ||| | | | ||||| ||||
Sbjct 8048 CCAGCGATCCGGCACCCGAACCACGGCCCGGACCCACCGGAATATCATGATCCTTGGCCC 7989
Query 39251 AGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGT 39310
| |||||||||||| |||| |||||||| ||||| ||||||||| |||| ||||
Sbjct 7988 ATTTGATGAAGTCGGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTGGATGATGATGT 7929
Query 39311 CGATCTCGTACT 39322
| || ||| |||
Sbjct 7928 CCATTTCGAACT 7917
Score = 98.7 bits (108), Expect = 3e-16
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38138 TCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGA 38197
||||||||||||||||||| || || |||||||| | || || | ||| ||||||||||
Sbjct 9056 TCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCGTCGCCAAGCGAGTAGCCGGCCAGGA 8997
Query 38198 TCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGA 38257
||||||| |||| | |||||| ||||| |||| || || || |||| || ||||
Sbjct 8996 TCTGCGCGGCCTGCATCACCTGTTCCTGATAGACGAAGATGCCATAGGTTTCTTCGAGGA 8937
Query 38258 TC 38259
||
Sbjct 8936 TC 8935
>seq7823
Length=199163
Score = 147 bits (162), Expect = 7e-31
Identities = 221/312 (71%), Gaps = 4/312 (1%)
Strand=Plus/Plus
Query 39009 GATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39068
|||||| |||||| ||| ||||||||| || |||||| ||| || || | ||
Sbjct 171076 GATCTGGGCGACCCGGTCGTCGCCGTACTTGTCCTGGACGTAGGCGATGACCTCTTCGCG 171135
Query 39069 GCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGG 39126
||| | | || |||||||||||| | ||||||||| || || ||||| |||||||||
Sbjct 171136 GCGTTCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGACACCCGCTCGGGGTTCAGG 171193
Query 39127 AACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTAC 39186
||||||||||| | || ||| | | || || || | |||||| ||||||||
Sbjct 171194 AACCGCTCGAACAGCAGGCCGAACCGCAGCGGATCGAGATTGGTGATGGTCAGGGCGTAG 171253
Query 39187 GCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTC 39246
||| |||| ||||| || | || || ||||| || || || | ||||| |||
Sbjct 171254 GCGACCAGAGAGCCGGCGCCCGAACCCCGCCCGGGCCCCACGGGGATGCCGTGGGTCTTG 171313
Query 39247 GCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATC 39306
||||| ||||||||| | |||| |||||||| || || ||||||| | |||
Sbjct 171314 GCCCACTTGATGAAGTCCGAAACGATCAGGAAGTAACCGGGAAAGCCCATCTTCTGGATG 171373
Query 39307 ATGTCGATCTCG 39318
| ||||||||||
Sbjct 171374 ACGTCGATCTCG 171385
Score = 109 bits (120), Expect = 2e-19
Identities = 262/391 (67%), Gaps = 18/391 (5%)
Strand=Plus/Plus
Query 38123 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGG 38182
||| | |||| |||||||||||||||||| || || || |||||||||| || |||
Sbjct 170235 CCATCTCCTCCTTCTTCTTCTTGCCCATGGCCCGGCGCAGCAGGTCGGCCTCGCCCAGGC 170294
Query 38183 TGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGA 38242
|||| || ||||||||||| || || | |||||| ||||| |||| ||||| |||
Sbjct 170295 TGTAGCCCGCCAGGATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATGACGCCGT 170354
Query 38243 AGGTCGGGTCCAGGATCTCGGCCAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATCT 38302
||||| | ||| | | |||||| | | || ||||| ||| || |
Sbjct 170355 AGGTCTCGCGCAGCACCGGCTCCAGCGACGGGTGCA-----GGGTG--TCGACGGG---- 170403
Query 38303 CCTGCTGACCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCATGCCCATCGGACCCG 38362
| ||| | ||| ||||| | | || || ||| ||| || ||||||| ||||
Sbjct 170404 CTTGC-GGCCGAACTTGCAGTCGACGAAG-CCGT---CGA--TGTTGTCCATCGGGCCCG 170456
Query 38363 GACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAACTGGTCCGGCTTCAGCAGGCGAA 38422
| ||||| |||| || | || | ||| ||||| | | | | || || | ||| |
Sbjct 170457 GCCGGTAGAGCGAGATCAGCGCGGTGATCTCCTCCAGCGAGCCGGGGCGCATCTTGCGCA 170516
Query 38423 GCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGGGTGTCGCCCCTGGCCA 38482
| | |||||| | || ||||||||||| ||| || || | |||| |||
Sbjct 170517 GGGTGTCGCGCATGCCCTGGCTTTCGAGCTGGAACACCCCGACCGTCTGGCCCGACCCCA 170576
Query 38483 GCAGCTCGTAGGTTGCCGGGTCGTCCAGCGG 38513
|||||||||||| | | | |||||||||||
Sbjct 170577 TCAGCTCGTAGGTCGGCTGATCGTCCAGCGG 170607
>seq9689
Length=17130
Score = 143 bits (158), Expect = 9e-30
Identities = 210/295 (71%), Gaps = 4/295 (1%)
Strand=Plus/Minus
Query 39031 CCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTCATC--GAAGTCGA 39088
|||||||| | |||||| |||||| ||| | ||||| | ||| ||||||||
Sbjct 9319 CCGTACTTGCGCGCGACGTAGTCGATCACCTCGTCGCGGCG--GTCCATGCAGAAGTCGA 9262
Query 39089 TGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGT 39148
|||| | ||||||||| || || || || || || ||||| |||||||| | || ||
Sbjct 9261 TGTCGAAGTCGGGCATCGACACGCGTTCGGGATTGAGGAATCGCTCGAACAGCAGGTTGT 9202
Query 39149 GAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAG 39208
|| | |||||||| ||||||||| || || |||| ||||||| || || | |
Sbjct 9201 ACGGCAGCGGGTCCAGATCGGTGATCTTCAGCGCCCACGCCACCAGCGAACCGGCACCCG 9142
Query 39209 AGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGA 39268
| || || || ||||||| | | ||| | | ||| |||| |||||||||||| |
Sbjct 9141 AACCACGGCCCGGGCCGATCGGAATGCCCTGGTTCTTGCCCCACTGGATGAAGTCGGCCA 9082
Query 39269 CGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCTCGTACTC 39323
||| |||||||| |||||| ||||||| | |||| ||| || |||| ||||
Sbjct 9081 CGATCAGGAAGTAGCCCGGGAAGCCCATCTTGATGATGGTGTTGAGCTCGAACTC 9027
Score = 131 bits (144), Expect = 5e-26
Identities = 240/347 (69%), Gaps = 6/347 (2%)
Strand=Plus/Minus
Query 37916 CCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGC 37975
|||||| ||| |||||||||| |||| ||||||||||| |||||| |||| ||
Sbjct 10443 CCGAGGACAGCGTGGCCGCCATGAACTCAGCCGGGTAGTGGCGCTTCAGCCACGCGGTCT 10384
Query 37976 GGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGG 38035
||||| || ||| | || || || | ||||| |||||||||| |||| ||||||||
Sbjct 10383 GGTAGCTGACCAGTGCATAGGCAGCGGCGTGCGACTTGTTGAAGCCGTAACCGGCGAACT 10324
Query 38036 GTACGAGCACGTCCCACACCGC-CCGG--ATGGCAGCCTCCGAGTAGCCTCGCTCGCTCG 38092
| | || ||| | | ||| ||| |||| | ||| | | || || | ||
Sbjct 10323 TCTCCATCAGGTCGAAGATCGCATCGGCCTTGGCTTCGTCC--ACACCGTC-CTTGGCCG 10267
Query 38093 CCCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGG 38152
| || | ||||| || || | |||||||| | | ||| |||||||||||| |
Sbjct 10266 CACCTTCGCGGAAGATCTCGCGGTGCTTGGCCATTTCGGCCGGCACCTTCTTGCCCATCG 10207
Query 38153 CGCGACGGAGGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCT 38212
|||| || || |||||||| || || | ||| ||| | | |||||||||| || |
Sbjct 10206 CGCGGCGCAGCAGGTCGGCGCCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCA 10147
Query 38213 GCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGATC 38259
||||||||||||||| | |||| ||| |||| | |||||||
Sbjct 10146 TCACCTGCTCCTGGTACACCATGATGCCGTAGGTGTCCTTCAGGATC 10100
>seq9683
Length=137075
Score = 143 bits (158), Expect = 9e-30
Identities = 262/379 (69%), Gaps = 6/379 (2%)
Strand=Plus/Minus
Query 38948 TGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCG 39007
|||||||||||||| || |||| || || |||||| || ||| | || |
Sbjct 109702 TGTCCAGCACGCGGCCCACGTCGCGGATGGCCGCGCGCGCGGCCATGGTGCCGAAGGTGG 109643
Query 39008 CGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCAC 39067
||||||| ||| ||| | ||||||| || | || || ||| ||| | | |
Sbjct 109642 CGATCTGGCTGACGGCGTCGCGGCCGTACAGCTGCTTCACATAGTCGATGACGCGGTCGC 109583
Query 39068 GGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAG 39125
|| | | | || |||||| | ||| | |||||||||||| |||||||| || || ||
Sbjct 109582 GGTTGGCCTGGCA--GAAGTCCACGTCGAAGTCGGGCATGGACACACGCTCGGGATTGAG 109525
Query 39126 GAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTA 39185
||| |||||||| | || || | ||||||||||| |||||| ||| ||||
Sbjct 109524 GAAACGCTCGAACAGCAGGTTGTATTCCAGCGGGTCCAGGTCCGTGATCTTGAGCACGTA 109465
Query 39186 CGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGAC-CCACACGCCGTTCTCCT 39244
|| |||||||||| || | || ||||| || || || || ||| |||||| ||
Sbjct 109464 GGCCACCAGCGAGCCGGCGCCCGATCCGCGGCCCGGACCCACGGGACA-GCCGTTGAGCT 109406
Query 39245 TCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGA 39304
| ||||| |||||||||| | |||| ||||||||| ||| || ||||||| | ||
Sbjct 109405 TGGCCCACTTGATGAAGTCGCCCACGATGAGGAAGTAGCCCGGAAAGCCCATCTTGAGGA 109346
Query 39305 TCATGTCGATCTCGTACTC 39323
| || |||||||| ||||
Sbjct 109345 TGGTGCCGATCTCGAACTC 109327
Score = 125 bits (138), Expect = 2e-24
Identities = 231/337 (69%), Gaps = 9/337 (3%)
Strand=Plus/Minus
Query 37940 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 37999
||||||||| ||||||| |||||| | |||||| | ||||| | || ||| || |
Sbjct 110713 ACTCGGCCGTGTAGTGCACCTTCAGCCAGGCCGTGTGATAGGCCAGCAGCGAGTAGGCGG 110654
Query 38000 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCC 38059
| | ||||| |||||||||| |||| || ||||| | | || ||| | ||| |
Sbjct 110653 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAGGTCGAAGACCTC-- 110596
Query 38060 GGATGGCAG---CCTCCGAGTAGCCTCGCTCGCTCGCCCCCTTCTGGAAGTTCACGAACT 38116
| ||| |||| | ||| ||| | ||| |||| ||||| || || |
Sbjct 110595 -GTCGGCCTTTTCCTCGCTGATGCCCTGCTTGGCCGCGCCCTCGCGGAAGATCCCGCGGT 110537
Query 38117 CCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGAC 38176
| || ||| ||||| |||||||||||||||||| || || | ||||||||| |
Sbjct 110536 GCATGACCATTTCCTCGACCTTCTTCTTGCCCATGGCACGGCGCAAGAGGTCGGCGCCGC 110477
Query 38177 CGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 38236
| || | ||| ||| |||| | ||| || | || | ||||||||||||||||| ||||
Sbjct 110476 CCAGCGAGTAGCCGCCCAGCACCTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGA 110417
Query 38237 GCCCGAAGGTCGGGTCCAGGA---TCTCGGCCAGCGG 38270
|||| |||| | |||| | | ||| |||||||
Sbjct 110416 TCCCGTAGGTTTCGGCCAGCACCTTTTCGACCAGCGG 110380
>seq7278
Length=293576
Score = 134 bits (148), Expect = 4e-27
Identities = 236/342 (69%), Gaps = 4/342 (1%)
Strand=Plus/Plus
Query 38942 AGGGCTTGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGT 39001
||||| | |||||||||||| | |||| || ||| ||||||| | | |||
Sbjct 266443 AGGGCATTTCCAGCACGCGGCCGACGTCGCGCAAAGCGGCACGCGCCTGCAGCGAACCGA 266502
Query 39002 ACGTCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGT 39061
| || |||||| || |||| |||| ||| || || | || || |||||||| |
Sbjct 266503 AGGTGATGATCTGCGCCACCTGCTCACGGCCATATTTGGCCTGCACATAGCGGATCACCT 266562
Query 39062 CGCCACGGCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGG 39119
| | |||||| | | || ||||||||| || | ||||||||| || || || |||||
Sbjct 266563 CCTCGCGGCGATCCTGGCA--GAAGTCGATATCGAAGTCGGGCATCGATACGCGTTCAGG 266620
Query 39120 GTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAG 39179
|| ||||| || ||||| | ||| | | | | || || | |||||||||| ||
Sbjct 266621 ATTGAGGAAGCGTTCGAATAGCAGCGAGAAACGCAGCGGATCGACGTCGGTGATCGTCAG 266680
Query 39180 GGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTT 39239
|| || ||| | |||||||| || | || || || || ||||| ||| | | | |
Sbjct 266681 CGCATAAGCGACGAGCGAGCCGGCACCCGAACCACGGCCCGGGCCAACCGGAATGTCATG 266740
Query 39240 CTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTA 39281
|| ||| ||||| |||||||||||| |||| |||||| ||
Sbjct 266741 CTGCTTGGCCCATTTGATGAAGTCGGCAACGATGAGGAAATA 266782
>seq6714
Length=1758414
Score = 134 bits (148), Expect = 4e-27
Identities = 221/317 (70%), Gaps = 4/317 (1%)
Strand=Plus/Plus
Query 39009 GATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39068
||||||| |||||| ||| | |||||| || | ||||| |||||||| || | ||
Sbjct 59298 GATCTGTCCGACCTGGTCGCGGCCGTATTTGGCCTGTACGTAGCGGATCACCTCTTCGCG 59357
Query 39069 GCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGG 39126
|||| | | || |||||||||||| | ||||||||| ||||| || || || || |||
Sbjct 59358 GCGATCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGAGACGCGGTCGGGATTAAGG 59415
Query 39127 AACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTAC 39186
|| |||||||| | ||| | | | || || | |||||||| || |||||
Sbjct 59416 AAGCGCTCGAACAGCAGCGAGAAGCGCAGCGGATCGACATCGGTGATGAGAAGCGCGTAG 59475
Query 39187 GCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTC 39246
|| ||||||| || || | ||||| || || |||||||| | | | | | |||
Sbjct 59476 GCAACCAGCGAACCCGCACCCGAGCCACGGCCCGGGCCGACAGGAATGTCATGTTGCTTG 59535
Query 39247 GCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATC 39306
||||| ||||||||| | |||| ||||| || |||||| ||| | | |||
Sbjct 59536 GCCCATTTGATGAAGTCCGACACGATCAGGAAATAGCCGGGGAACTTCATGCGCTGGATG 59595
Query 39307 ATGTCGATCTCGTACTC 39323
||| |||||||| ||||
Sbjct 59596 ATGCCGATCTCGAACTC 59612
Score = 80.6 bits (88), Expect = 9e-11
Identities = 76/97 (78%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 38138 TCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGA 38197
||||||||||||||||||| || | | ||||||||||||||| ||||| || || ||
Sbjct 58472 TCTTCTTGCCCATGGCGCGGCGCAACAAGTCGGCCTGACCGAGCGTGTAGCCCGCAAGCT 58531
Query 38198 TCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGAT 38234
||||| || | |||||| |||||||||| |||
Sbjct 58532 CTTGCGCGATCTGCATCACCTGTTCCTGGTAGACGAT 58568
>seq9026
Length=54586
Score = 129 bits (142), Expect = 2e-25
Identities = 235/343 (69%), Gaps = 6/343 (2%)
Strand=Plus/Plus
Query 39009 GATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39068
|||||| || || ||| | |||||||||||| || || |||||| || |
Sbjct 21687 GATCTGGGCCACGCGGTCGCGGCCGTACTTCTCCTGAACATAGGAGATCACCTCTTC--- 21743
Query 39069 GCGACGGTCATCG---AAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAG 39125
|||||| || | | ||||||| ||| | ||||||||| || || || || || || ||
Sbjct 21744 GCGACGCTCCTGGCAGAAGTCGACGTCGAAGTCGGGCATCGAAACCCGTTCGGGATTGAG 21803
Query 39126 GAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTA 39185
|||||||||||| | || || | | ||||||||||||||||| || | |
Sbjct 21804 GAACCGCTCGAACAGCAGACCAAAGCGCAGCGGGTCCAGGTCGGTGATGGTCAGTACCCA 21863
Query 39186 CGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTT 39245
||| ||||||| || || | ||||| || || |||||||| | |||| | ||||
Sbjct 21864 GGCGACCAGCGACCCGGCGCCCGAGCCCCGTCCGGGGCCGACGGGAATACCGTGCGCCTT 21923
Query 39246 CGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGAT 39305
|||| |||||| || | |||| |||||||| ||||| ||||||| | |||
Sbjct 21924 ACCCCATTTGATGAAATCCGACACGATCAGGAAGTAGCCGGGGAAGCCCATCTTCTCGAT 21983
Query 39306 CATGTCGATCTCGTACTCGACCTGCGTGCGGTGCTCGTCGTCG 39348
||| ||| |||| | |||| | | | | || ||| || |||
Sbjct 21984 GATGCCGAGCTCGAAATCGAGCCGTTTCCAGTACTCTTCCTCG 22026
Score = 95.1 bits (104), Expect = 4e-15
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 38123 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGG 38182
||| | |||| ||||||||||||||||||||| || || |||||||| | || |||
Sbjct 20846 CCATCTCCTCCTTCTTCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCTTCGCCCAGGC 20905
Query 38183 TGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGA 38242
|||| || ||||| ||||| || || | |||||| ||||| |||| ||||| |||
Sbjct 20906 TGTAGCCCGCCAGAATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATGACGCCGT 20965
Query 38243 AGGTC 38247
|||||
Sbjct 20966 AGGTC 20970
>seq4285
Length=661
Score = 93.3 bits (102), Expect = 1e-14
Identities = 107/143 (75%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 38105 AGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGA 38164
|||||||| | |||||||| |||||| |||||||||||||||||| || || || |
Sbjct 425 AGTTCACGG--TGCTTGGCCATTTCCTCGGCCTTCTTCTTGCCCATGGCCCGGCGCAGCA 482
Query 38165 GGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCT 38224
|||||| ||| || | ||| || | | | ||||||| || | |||||||||||
Sbjct 483 AGTCGGCGCCACCCAGCGAGTAGCCACCGATCACCTGCGCCATCTGCATCACCTGCTCCT 542
Query 38225 GGTAGATGATGAGCCCGAAGGTC 38247
|||||| |||| ||| |||||
Sbjct 543 GGTAGACCATGATGCCGTAGGTC 565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159686638829538
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