Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_028895.1
Length=116138
Score E
Sequences producing significant alignments: (Bits) Value
seq9676 84.2 2e-11
>seq9676
Length=343241
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 36827 TGGTCTTCATAAATGTGCGCATTTACTATCTTATGAAACGCTCTGCCAGGTTCTAGTCCA 36886
|| || |||||||| |||||||| || | |||||||| ||| |||| | || | ||
Sbjct 84769 TGATCCTCATAAATATGCGCATTGACCAGTTTATGAAAAGCTTTGCCCGCTTTTTTGCCC 84710
Query 36887 GTTATTTGAGCAACTATAGCTAGGAATGCGTACACTTGTACCATGTTGAAGTTAAGTCCT 36946
|| ||||| || |||| ||||| || || ||||| ||||| |||||||| || ||
Sbjct 84709 GTGATTTGCGCCACTAAAGCTAACAAGAAATAGACTTGCACCATATTGAAGTTGAGGCCA 84650
Query 36947 AACGGTACGTCACAAGAGCGCTGAGTAGCGTTAAGGTACAGTTTACTATTTAGTATAGAG 37006
| ||| || |||||| | ||| ||| || | || || || | || |||
Sbjct 84649 AGCGGCACATCACAACTTCTCTGTGTACTATTTAAATATAGCGTATCGCCCAATAATGAG 84590
Query 37007 AACTGGAAGTTGTACATACAAGGGCGTAGGCAGCCC 37042
|| || | | ||||||||||| | || ||||||
Sbjct 84589 AAATGATGGCTATACATACAAGGCCTTAAACAGCCC 84554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 371448614941201
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |