Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_028895.1 Length=116138 Score E Sequences producing significant alignments: (Bits) Value seq9676 84.2 2e-11 >seq9676 Length=343241 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 36827 TGGTCTTCATAAATGTGCGCATTTACTATCTTATGAAACGCTCTGCCAGGTTCTAGTCCA 36886 || || |||||||| |||||||| || | |||||||| ||| |||| | || | || Sbjct 84769 TGATCCTCATAAATATGCGCATTGACCAGTTTATGAAAAGCTTTGCCCGCTTTTTTGCCC 84710 Query 36887 GTTATTTGAGCAACTATAGCTAGGAATGCGTACACTTGTACCATGTTGAAGTTAAGTCCT 36946 || ||||| || |||| ||||| || || ||||| ||||| |||||||| || || Sbjct 84709 GTGATTTGCGCCACTAAAGCTAACAAGAAATAGACTTGCACCATATTGAAGTTGAGGCCA 84650 Query 36947 AACGGTACGTCACAAGAGCGCTGAGTAGCGTTAAGGTACAGTTTACTATTTAGTATAGAG 37006 | ||| || |||||| | ||| ||| || | || || || | || ||| Sbjct 84649 AGCGGCACATCACAACTTCTCTGTGTACTATTTAAATATAGCGTATCGCCCAATAATGAG 84590 Query 37007 AACTGGAAGTTGTACATACAAGGGCGTAGGCAGCCC 37042 || || | | ||||||||||| | || |||||| Sbjct 84589 AAATGATGGCTATACATACAAGGCCTTAAACAGCCC 84554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 371448614941201