Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_028961.1
Length=55094
Score E
Sequences producing significant alignments: (Bits) Value
seq6714 89.7 2e-13
>seq6714
Length=1758414
Score = 89.7 bits (98), Expect = 2e-13
Identities = 141/196 (72%), Gaps = 12/196 (6%)
Strand=Plus/Minus
Query 41251 CGTGTGGACGCTGCCTACCCAGCCGTTCGCCGGCGCGCACTTCGCGGTGTTCCCGCCCGC 41310
||||||| | || | || ||||||||| | | ||| ||||||||| |||||||| |
Sbjct 824457 CGTGTGGCCAATGGCGACGCAGCCGTTCTCTGACGCTCACTTCGCGACATTCCCGCCGGA 824398
Query 41311 ACT-GCCGCAGCGCTGCATCCTCGCGGGCTGC---AAACCCGGCGGCACGGTGCTCGACC 41366
||| |||| |||||||||||||||| || ||| ||| |||||| ||| |||||||
Sbjct 824397 ACTAGCCG-AGCGCTGCATCCTCGCCGGGTGCCCGAAA---GGCGGCTTGGTACTCGACC 824342
Query 41367 CGTTTAACGGTTCGGGCACAACAGGACTCGCCGCACAACGCACCGGCCG--CCGCTACAT 41424
| || ||| | |||||||| | || | || | ||| ||| || ||||||||
Sbjct 824341 CATTCGGCGGCGCTGGCACAACGGCCCTGGTTGCCCTTCGCCACGGTCGGCACGCTACAT 824282
Query 41425 CGGCATCGACATCAAC 41440
| ||||| |||||
Sbjct 824281 TG--ATCGAACTCAAC 824268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 176147694644448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |