Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_028976.1
Length=50113
Score E
Sequences producing significant alignments: (Bits) Value
seq11548 197 4e-46
seq7823 159 1e-34
seq9689 150 6e-32
seq9026 138 4e-28
seq6714 138 4e-28
seq9683 136 1e-27
seq7278 129 2e-25
seq4285 93.3 1e-14
>seq11548
Length=62939
Score = 197 bits (218), Expect = 4e-46
Identities = 266/368 (72%), Gaps = 2/368 (1%)
Strand=Plus/Minus
Query 39385 CAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCGCGAT 39444
|| ||||||| | | |||||||| | || ||||||||| | | ||| | || |||
Sbjct 8287 CATCACGCGGCCAGTGTCCTTCAGCACGGCGCGGGCCTTCAATTTACCGAAGGTGATGAT 8228
Query 39445 CTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTG-ACGTACCGGATCACGTCGCCACGGC 39503
||| ||||| | ||||||||| || |||| | || || || |||||||| ||||| || |
Sbjct 8227 CTGGGCGACATGGTCGCTGCCATATTTCT-GCTGCACATAGCGGATCACCTCGCCGCGCC 8169
Query 39504 GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAACC 39563
| || ||||||||| || | |||||||||||| ||||| || ||||||||||| |
Sbjct 8168 GCGTTTCGCAGAAGTCGATATCGAAGTCGGGCATGGAAACGCGTTCCGGGTTCAGGAAGC 8109
Query 39564 GCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGG 39623
||||||| | || || | | | ||||| || || ||||| || || | |||
Sbjct 8108 GCTCGAACAGCAGGCCCAGTTGCAGCGGGTCGAGATCAGTGATGGTCAGCGCCCAGGCGA 8049
Query 39624 CCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGCCC 39683
||||||| || || | || ||||| || || || ||| | | | | ||||| ||||
Sbjct 8048 CCAGCGATCCGGCACCCGAACCACGGCCCGGACCCACCGGAATATCATGATCCTTGGCCC 7989
Query 39684 AGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGT 39743
| |||||||||||| |||| |||||||| ||||| ||||||||| |||| ||||
Sbjct 7988 ATTTGATGAAGTCGGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTGGATGATGATGT 7929
Query 39744 CGATCTCG 39751
| || |||
Sbjct 7928 CCATTTCG 7921
Score = 104 bits (114), Expect = 7e-18
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38571 TCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGA 38630
||||||||||||||||||| || ||||||||||| | || || | ||| ||||||||||
Sbjct 9056 TCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCGTCGCCAAGCGAGTAGCCGGCCAGGA 8997
Query 38631 TCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGA 38690
||||||| |||| | |||||| ||||| |||| || || || |||| || ||||
Sbjct 8996 TCTGCGCGGCCTGCATCACCTGTTCCTGATAGACGAAGATGCCATAGGTTTCTTCGAGGA 8937
Query 38691 TC 38692
||
Sbjct 8936 TC 8935
>seq7823
Length=199163
Score = 159 bits (176), Expect = 1e-34
Identities = 262/376 (70%), Gaps = 4/376 (1%)
Strand=Plus/Plus
Query 39385 CAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCGCGAT 39444
|||||||||| | |||| || | || ||||||| | ||||| | || |||
Sbjct 171019 CAGCACGCGGCCGACGTCGCGCAGCACGGCCCGGGCCTGCAGGGTGCCGAAGGTGATGAT 171078
Query 39445 CTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCG 39504
||| |||||| |||| ||||||||| || |||||| ||| || || | |||||
Sbjct 171079 CTGGGCGACCCGGTCGTCGCCGTACTTGTCCTGGACGTAGGCGATGACCTCTTCGCGGCG 171138
Query 39505 A--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAAC 39562
| | || |||||||||||| | ||||||||| || || ||||| ||||||||||||
Sbjct 171139 TTCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGACACCCGCTCGGGGTTCAGGAAC 171196
Query 39563 CGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCG 39622
|||||||| | || ||| | | || || || | |||||| |||||||| |||
Sbjct 171197 CGCTCGAACAGCAGGCCGAACCGCAGCGGATCGAGATTGGTGATGGTCAGGGCGTAGGCG 171256
Query 39623 GCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGCC 39682
|||| ||||| || | || || ||||| || || || | |||| ||| |||
Sbjct 171257 ACCAGAGAGCCGGCGCCCGAACCCCGCCCGGGCCCCACGGGGATGCCGTGGGTCTTGGCC 171316
Query 39683 CAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATG 39742
|| ||||||||| | |||| |||||||| || || ||||||| | ||| | |
Sbjct 171317 CACTTGATGAAGTCCGAAACGATCAGGAAGTAACCGGGAAAGCCCATCTTCTGGATGACG 171376
Query 39743 TCGATCTCGTAGTCGA 39758
||||||||| |||||
Sbjct 171377 TCGATCTCGCGGTCGA 171392
Score = 109 bits (120), Expect = 2e-19
Identities = 262/391 (67%), Gaps = 18/391 (5%)
Strand=Plus/Plus
Query 38556 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGGG 38615
||| | |||| |||||||||||||||||| || || || |||||||||| || |||
Sbjct 170235 CCATCTCCTCCTTCTTCTTCTTGCCCATGGCCCGGCGCAGCAGGTCGGCCTCGCCCAGGC 170294
Query 38616 TGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGA 38675
|||| || ||||||||||| || || | |||||| ||||| |||| ||||| |||
Sbjct 170295 TGTAGCCCGCCAGGATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATGACGCCGT 170354
Query 38676 AGGTCGGGTCCAGGATCTCGGCCAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATCT 38735
||||| | ||| | | |||||| | | || ||||| ||| || |
Sbjct 170355 AGGTCTCGCGCAGCACCGGCTCCAGCGACGGGTGCA-----GGGTG--TCGACGGG---- 170403
Query 38736 CCTGCTGCCCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCATGCCCATCGGACCCG 38795
| ||| | ||| ||||| | | || || ||| ||| || ||||||| ||||
Sbjct 170404 CTTGC-GGCCGAACTTGCAGTCGACGAAG-CCGT---CGA--TGTTGTCCATCGGGCCCG 170456
Query 38796 GACGGTACAGCGCCACGACGGCGGAGATGTCCTCGAACTGGTCCGGCTTCAGCAGGCGGA 38855
| ||||| |||| | | |||| ||| ||||| | | | | || || | ||| |
Sbjct 170457 GCCGGTAGAGCGAGATCAGCGCGGTGATCTCCTCCAGCGAGCCGGGGCGCATCTTGCGCA 170516
Query 38856 GCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAACACCGAGAGCGTGTCGCCCCTGGCCA 38915
| | |||||| | || ||||||||||||||| || ||| | |||| |||
Sbjct 170517 GGGTGTCGCGCATGCCCTGGCTTTCGAGCTGGAACACCCCGACCGTCTGGCCCGACCCCA 170576
Query 38916 GCAGCTCGTACGTCGCGGGGTCATCCAGCGG 38946
||||||||| |||| | || ||||||||
Sbjct 170577 TCAGCTCGTAGGTCGGCTGATCGTCCAGCGG 170607
>seq9689
Length=17130
Score = 150 bits (166), Expect = 6e-32
Identities = 258/371 (70%), Gaps = 10/371 (3%)
Strand=Plus/Minus
Query 39386 AGCACGCGGGCCGCGTC---CTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCGCG 39442
||||||||| | | ||| | || ||| ||| |||| || | |||||| || |
Sbjct 9397 AGCACGCGGCCGGAGTCGCGCACCACCGCCTTGGCGGCCATGGT---GCCGTAGGTGATG 9341
Query 39443 ATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGG 39502
||||| ||| |||| |||||||| | |||||| |||||| ||| | |||
Sbjct 9340 ATCTGGCTGACGCGCTCGCGCCCGTACTTGCGCGCGACGTAGTCGATCACCTCGTCGCGG 9281
Query 39503 CGACGGTCATC--GAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGA 39560
|| | ||| |||||||||||| | ||||||||| || ||||| || || || ||||
Sbjct 9280 CG--GTCCATGCAGAAGTCGATGTCGAAGTCGGGCATCGACACGCGTTCGGGATTGAGGA 9223
Query 39561 ACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACG 39620
| |||||||| | || || || | |||||||| ||||||||| || || |||
Sbjct 9222 ATCGCTCGAACAGCAGGTTGTACGGCAGCGGGTCCAGATCGGTGATCTTCAGCGCCCACG 9163
Query 39621 CGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCG 39680
| ||||||| || || | || ||||| || ||||||| | | || | | |||
Sbjct 9162 CCACCAGCGAACCGGCACCCGAACCACGGCCCGGGCCGATCGGAATGCCCTGGTTCTTGC 9103
Query 39681 CCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCA 39740
|||| |||||||||||| |||| |||||||| |||||| ||||||| | ||||
Sbjct 9102 CCCACTGGATGAAGTCGGCCACGATCAGGAAGTAGCCCGGGAAGCCCATCTTGATGATGG 9043
Query 39741 TGTCGATCTCG 39751
||| || ||||
Sbjct 9042 TGTTGAGCTCG 9032
Score = 131 bits (144), Expect = 5e-26
Identities = 240/347 (69%), Gaps = 6/347 (2%)
Strand=Plus/Minus
Query 38349 CCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGC 38408
|||||| ||| |||||||||| |||| ||||||||||| |||||| |||| ||
Sbjct 10443 CCGAGGACAGCGTGGCCGCCATGAACTCAGCCGGGTAGTGGCGCTTCAGCCACGCGGTCT 10384
Query 38409 GGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGG 38468
||||| || ||| | || || || | ||||| |||||||||| |||| ||||||||
Sbjct 10383 GGTAGCTGACCAGTGCATAGGCAGCGGCGTGCGACTTGTTGAAGCCGTAACCGGCGAACT 10324
Query 38469 GTACGAGCACGTCCCACACCGC-CCGG--ATGGCAGCGTCCGAGTAGCCTCGCTCGCTTG 38525
| | || ||| | | ||| ||| |||| ||||| | | || || | |
Sbjct 10323 TCTCCATCAGGTCGAAGATCGCATCGGCCTTGGCTTCGTCC--ACACCGTC-CTTGGCCG 10267
Query 38526 CTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGG 38585
| || | ||||| || || | |||||||| | | ||| |||||||||||| |
Sbjct 10266 CACCTTCGCGGAAGATCTCGCGGTGCTTGGCCATTTCGGCCGGCACCTTCTTGCCCATCG 10207
Query 38586 CGCGACGGAGAAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCT 38645
|||| || || |||||||| || || | ||| ||| | | |||||||||| || |
Sbjct 10206 CGCGGCGCAGCAGGTCGGCGCCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCA 10147
Query 38646 GCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGATC 38692
||||||||||||||| | |||| ||| |||| | |||||||
Sbjct 10146 TCACCTGCTCCTGGTACACCATGATGCCGTAGGTGTCCTTCAGGATC 10100
>seq9026
Length=54586
Score = 138 bits (152), Expect = 4e-28
Identities = 237/343 (69%), Gaps = 6/343 (2%)
Strand=Plus/Plus
Query 39442 GATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39501
|||||| || || ||||| |||||||||||| || || |||||| || |
Sbjct 21687 GATCTGGGCCACGCGGTCGCGGCCGTACTTCTCCTGAACATAGGAGATCACCTCTTC--- 21743
Query 39502 GCGACGGTCATCG---AAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAG 39558
|||||| || | | ||||||| ||| | ||||||||| || || || || || || ||
Sbjct 21744 GCGACGCTCCTGGCAGAAGTCGACGTCGAAGTCGGGCATCGAAACCCGTTCGGGATTGAG 21803
Query 39559 GAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTA 39618
|||||||||||| | || || | | ||||||||||||||||| || | |
Sbjct 21804 GAACCGCTCGAACAGCAGACCAAAGCGCAGCGGGTCCAGGTCGGTGATGGTCAGTACCCA 21863
Query 39619 CGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTT 39678
||| ||||||| || || | ||||| || || |||||||| | ||||| | ||||
Sbjct 21864 GGCGACCAGCGACCCGGCGCCCGAGCCCCGTCCGGGGCCGACGGGAATACCGTGCGCCTT 21923
Query 39679 CGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGAT 39738
|||| |||||| || | |||| |||||||| ||||| ||||||| | |||
Sbjct 21924 ACCCCATTTGATGAAATCCGACACGATCAGGAAGTAGCCGGGGAAGCCCATCTTCTCGAT 21983
Query 39739 CATGTCGATCTCGTAGTCGACCTGCGTTCGGTGCTCGTCGTCG 39781
||| ||| |||| | |||| | | | | || ||| || |||
Sbjct 21984 GATGCCGAGCTCGAAATCGAGCCGTTTCCAGTACTCTTCCTCG 22026
Score = 100 bits (110), Expect = 9e-17
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 38556 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGGG 38615
||| | |||| ||||||||||||||||||||| || ||||||||||| | || |||
Sbjct 20846 CCATCTCCTCCTTCTTCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCTTCGCCCAGGC 20905
Query 38616 TGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGA 38675
|||| || ||||| ||||| || || | |||||| ||||| |||| ||||| |||
Sbjct 20906 TGTAGCCCGCCAGAATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATGACGCCGT 20965
Query 38676 AGGTC 38680
|||||
Sbjct 20966 AGGTC 20970
>seq6714
Length=1758414
Score = 138 bits (152), Expect = 4e-28
Identities = 219/312 (70%), Gaps = 4/312 (1%)
Strand=Plus/Plus
Query 39442 GATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39501
||||||| |||||| ||||| |||||| || | ||||| |||||||| || | ||
Sbjct 59298 GATCTGTCCGACCTGGTCGCGGCCGTATTTGGCCTGTACGTAGCGGATCACCTCTTCGCG 59357
Query 39502 GCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGG 39559
|||| | | || |||||||||||| | ||||||||| |||||||| || || || |||
Sbjct 59358 GCGATCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGAGACGCGGTCGGGATTAAGG 59415
Query 39560 AACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTAC 39619
|| |||||||| | ||| | | | || || | |||||||| || |||||
Sbjct 59416 AAGCGCTCGAACAGCAGCGAGAAGCGCAGCGGATCGACATCGGTGATGAGAAGCGCGTAG 59475
Query 39620 GCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTC 39679
|| ||||||| || || | |||||||| || |||||||| | | | | |||
Sbjct 59476 GCAACCAGCGAACCCGCACCCGAGCCACGGCCCGGGCCGACAGGAATGTCATGTTGCTTG 59535
Query 39680 GCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATC 39739
||||| ||||||||| | |||| ||||| || |||||| ||| | | |||
Sbjct 59536 GCCCATTTGATGAAGTCCGACACGATCAGGAAATAGCCGGGGAACTTCATGCGCTGGATG 59595
Query 39740 ATGTCGATCTCG 39751
||| ||||||||
Sbjct 59596 ATGCCGATCTCG 59607
Score = 80.6 bits (88), Expect = 9e-11
Identities = 76/97 (78%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 38571 TCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGA 38630
||||||||||||||||||| || | | ||||||||||||||| ||||| || || ||
Sbjct 58472 TCTTCTTGCCCATGGCGCGGCGCAACAAGTCGGCCTGACCGAGCGTGTAGCCCGCAAGCT 58531
Query 38631 TCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGAT 38667
||||| || | |||||| |||||||||| |||
Sbjct 58532 CTTGCGCGATCTGCATCACCTGTTCCTGGTAGACGAT 58568
>seq9683
Length=137075
Score = 136 bits (150), Expect = 1e-27
Identities = 259/377 (69%), Gaps = 12/377 (3%)
Strand=Plus/Minus
Query 39381 TGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCG 39440
|||||||||||||| || |||| || || ||| || || ||||| | || |
Sbjct 109702 TGTCCAGCACGCGGCCCACGTCGCGGATGGCCGCGCGCGCGGCCATGGTGCCGAAGGTGG 109643
Query 39441 CGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCAC 39500
||||||| ||| ||||| ||||||| || | || || ||| ||| | | |
Sbjct 109642 CGATCTGGCTGACGGCGTCGCGGCCGTACAGCTGCTTCACATAGTCGATGACGCGGTCGC 109583
Query 39501 GGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAG 39558
|| | | | || |||||| | ||| | |||||||||||| || ||||| || || ||
Sbjct 109582 GGTTGGCCTGGCA--GAAGTCCACGTCGAAGTCGGGCATGGACACACGCTCGGGATTGAG 109525
Query 39559 GAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTA 39618
||| |||||||| | || || | ||||||||||| |||||| ||| ||||
Sbjct 109524 GAAACGCTCGAACAGCAGGTTGTATTCCAGCGGGTCCAGGTCCGTGATCTTGAGCACGTA 109465
Query 39619 CGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCAC---ACA-CCGTTCT 39674
|| |||||||||| || | || || || || | ||||||| ||| |||||
Sbjct 109464 GGCCACCAGCGAGCCGGCGCCCGATCCGCGGCC----CGGACCCACGGGACAGCCGTTGA 109409
Query 39675 CCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGT 39734
||| ||||| |||||||||| | |||| ||||||||| ||| || ||||||| |
Sbjct 109408 GCTTGGCCCACTTGATGAAGTCGCCCACGATGAGGAAGTAGCCCGGAAAGCCCATCTTGA 109349
Query 39735 TGATCATGTCGATCTCG 39751
||| || ||||||||
Sbjct 109348 GGATGGTGCCGATCTCG 109332
Score = 111 bits (122), Expect = 5e-20
Identities = 230/337 (68%), Gaps = 9/337 (3%)
Strand=Plus/Minus
Query 38373 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 38432
||||||||| ||||||| |||||| | |||||| | ||||| | || ||| || |
Sbjct 110713 ACTCGGCCGTGTAGTGCACCTTCAGCCAGGCCGTGTGATAGGCCAGCAGCGAGTAGGCGG 110654
Query 38433 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCC- 38491
| | ||||| |||||||||| |||| || ||||| | | || ||| | ||| |
Sbjct 110653 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAGGTCGAAGACCTCGT 110594
Query 38492 CGGA--TGGCAGCGTCCGAGTAGCCTCGCTCGCTTGCTCCCTTCTGGAAGTTCACGAACT 38549
||| | | || | || ||| ||| | || |||| ||||| || || |
Sbjct 110593 CGGCCTTTTCCTCG-CTGAT--GCCCTGCTTGGCCGCGCCCTCGCGGAAGATCCCGCGGT 110537
Query 38550 CCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGAC 38609
| || ||| ||||| |||||||||||||||||| || || | |||||||| |
Sbjct 110536 GCATGACCATTTCCTCGACCTTCTTCTTGCCCATGGCACGGCGCAAGAGGTCGGCGCCGC 110477
Query 38610 CGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 38669
| || | ||| ||| |||| | ||| || | || | ||||||||||||||||| ||||
Sbjct 110476 CCAGCGAGTAGCCGCCCAGCACCTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGA 110417
Query 38670 GCCCGAAGGTCGGGTCCAGGA---TCTCGGCCAGCGG 38703
|||| |||| | |||| | | ||| |||||||
Sbjct 110416 TCCCGTAGGTTTCGGCCAGCACCTTTTCGACCAGCGG 110380
>seq7278
Length=293576
Score = 129 bits (142), Expect = 2e-25
Identities = 235/342 (69%), Gaps = 4/342 (1%)
Strand=Plus/Plus
Query 39375 AGGGCTTGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGT 39434
||||| | |||||||||||| | |||| || ||| || |||| | | |||
Sbjct 266443 AGGGCATTTCCAGCACGCGGCCGACGTCGCGCAAAGCGGCACGCGCCTGCAGCGAACCGA 266502
Query 39435 ACGTCGCGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGT 39494
| || |||||| || |||| || | ||| || || | || || |||||||| |
Sbjct 266503 AGGTGATGATCTGCGCCACCTGCTCACGGCCATATTTGGCCTGCACATAGCGGATCACCT 266562
Query 39495 CGCCACGGCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGG 39552
| | |||||| | | || ||||||||| || | ||||||||| || ||||| |||||
Sbjct 266563 CCTCGCGGCGATCCTGGCA--GAAGTCGATATCGAAGTCGGGCATCGATACGCGTTCAGG 266620
Query 39553 GTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAG 39612
|| ||||| || ||||| | ||| | | | | || || | |||||||||| ||
Sbjct 266621 ATTGAGGAAGCGTTCGAATAGCAGCGAGAAACGCAGCGGATCGACGTCGGTGATCGTCAG 266680
Query 39613 GGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTT 39672
|| || ||| | |||||||| || | || ||||| || ||||| ||| | | |
Sbjct 266681 CGCATAAGCGACGAGCGAGCCGGCACCCGAACCACGGCCCGGGCCAACCGGAATGTCATG 266740
Query 39673 CTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTA 39714
|| ||| ||||| |||||||||||| |||| |||||| ||
Sbjct 266741 CTGCTTGGCCCATTTGATGAAGTCGGCAACGATGAGGAAATA 266782
>seq4285
Length=661
Score = 93.3 bits (102), Expect = 1e-14
Identities = 107/143 (75%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 38538 AGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAA 38597
|||||||| | |||||||| |||||| |||||||||||||||||| || || || |
Sbjct 425 AGTTCACGG--TGCTTGGCCATTTCCTCGGCCTTCTTCTTGCCCATGGCCCGGCGCAGCA 482
Query 38598 GGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCT 38657
|||||| ||| || | ||| || | | | ||||||| || | |||||||||||
Sbjct 483 AGTCGGCGCCACCCAGCGAGTAGCCACCGATCACCTGCGCCATCTGCATCACCTGCTCCT 542
Query 38658 GGTAGATGATGAGCCCGAAGGTC 38680
|||||| |||| ||| |||||
Sbjct 543 GGTAGACCATGATGCCGTAGGTC 565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160211344981850
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