Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq11548 197 4e-46 seq7823 159 1e-34 seq9689 150 6e-32 seq9026 138 4e-28 seq6714 138 4e-28 seq9683 136 1e-27 seq7278 129 2e-25 seq4285 93.3 1e-14 >seq11548 Length=62939 Score = 197 bits (218), Expect = 4e-46 Identities = 266/368 (72%), Gaps = 2/368 (1%) Strand=Plus/Minus Query 39385 CAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCGCGAT 39444 || ||||||| | | |||||||| | || ||||||||| | | ||| | || ||| Sbjct 8287 CATCACGCGGCCAGTGTCCTTCAGCACGGCGCGGGCCTTCAATTTACCGAAGGTGATGAT 8228 Query 39445 CTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTG-ACGTACCGGATCACGTCGCCACGGC 39503 ||| ||||| | ||||||||| || |||| | || || || |||||||| ||||| || | Sbjct 8227 CTGGGCGACATGGTCGCTGCCATATTTCT-GCTGCACATAGCGGATCACCTCGCCGCGCC 8169 Query 39504 GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAACC 39563 | || ||||||||| || | |||||||||||| ||||| || ||||||||||| | Sbjct 8168 GCGTTTCGCAGAAGTCGATATCGAAGTCGGGCATGGAAACGCGTTCCGGGTTCAGGAAGC 8109 Query 39564 GCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGG 39623 ||||||| | || || | | | ||||| || || ||||| || || | ||| Sbjct 8108 GCTCGAACAGCAGGCCCAGTTGCAGCGGGTCGAGATCAGTGATGGTCAGCGCCCAGGCGA 8049 Query 39624 CCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGCCC 39683 ||||||| || || | || ||||| || || || ||| | | | | ||||| |||| Sbjct 8048 CCAGCGATCCGGCACCCGAACCACGGCCCGGACCCACCGGAATATCATGATCCTTGGCCC 7989 Query 39684 AGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGT 39743 | |||||||||||| |||| |||||||| ||||| ||||||||| |||| |||| Sbjct 7988 ATTTGATGAAGTCGGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTGGATGATGATGT 7929 Query 39744 CGATCTCG 39751 | || ||| Sbjct 7928 CCATTTCG 7921 Score = 104 bits (114), Expect = 7e-18 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38571 TCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGA 38630 ||||||||||||||||||| || ||||||||||| | || || | ||| |||||||||| Sbjct 9056 TCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCGTCGCCAAGCGAGTAGCCGGCCAGGA 8997 Query 38631 TCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGA 38690 ||||||| |||| | |||||| ||||| |||| || || || |||| || |||| Sbjct 8996 TCTGCGCGGCCTGCATCACCTGTTCCTGATAGACGAAGATGCCATAGGTTTCTTCGAGGA 8937 Query 38691 TC 38692 || Sbjct 8936 TC 8935 >seq7823 Length=199163 Score = 159 bits (176), Expect = 1e-34 Identities = 262/376 (70%), Gaps = 4/376 (1%) Strand=Plus/Plus Query 39385 CAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCGCGAT 39444 |||||||||| | |||| || | || ||||||| | ||||| | || ||| Sbjct 171019 CAGCACGCGGCCGACGTCGCGCAGCACGGCCCGGGCCTGCAGGGTGCCGAAGGTGATGAT 171078 Query 39445 CTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCG 39504 ||| |||||| |||| ||||||||| || |||||| ||| || || | ||||| Sbjct 171079 CTGGGCGACCCGGTCGTCGCCGTACTTGTCCTGGACGTAGGCGATGACCTCTTCGCGGCG 171138 Query 39505 A--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAAC 39562 | | || |||||||||||| | ||||||||| || || ||||| |||||||||||| Sbjct 171139 TTCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGACACCCGCTCGGGGTTCAGGAAC 171196 Query 39563 CGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCG 39622 |||||||| | || ||| | | || || || | |||||| |||||||| ||| Sbjct 171197 CGCTCGAACAGCAGGCCGAACCGCAGCGGATCGAGATTGGTGATGGTCAGGGCGTAGGCG 171256 Query 39623 GCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGCC 39682 |||| ||||| || | || || ||||| || || || | |||| ||| ||| Sbjct 171257 ACCAGAGAGCCGGCGCCCGAACCCCGCCCGGGCCCCACGGGGATGCCGTGGGTCTTGGCC 171316 Query 39683 CAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATG 39742 || ||||||||| | |||| |||||||| || || ||||||| | ||| | | Sbjct 171317 CACTTGATGAAGTCCGAAACGATCAGGAAGTAACCGGGAAAGCCCATCTTCTGGATGACG 171376 Query 39743 TCGATCTCGTAGTCGA 39758 ||||||||| ||||| Sbjct 171377 TCGATCTCGCGGTCGA 171392 Score = 109 bits (120), Expect = 2e-19 Identities = 262/391 (67%), Gaps = 18/391 (5%) Strand=Plus/Plus Query 38556 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGGG 38615 ||| | |||| |||||||||||||||||| || || || |||||||||| || ||| Sbjct 170235 CCATCTCCTCCTTCTTCTTCTTGCCCATGGCCCGGCGCAGCAGGTCGGCCTCGCCCAGGC 170294 Query 38616 TGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGA 38675 |||| || ||||||||||| || || | |||||| ||||| |||| ||||| ||| Sbjct 170295 TGTAGCCCGCCAGGATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATGACGCCGT 170354 Query 38676 AGGTCGGGTCCAGGATCTCGGCCAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATCT 38735 ||||| | ||| | | |||||| | | || ||||| ||| || | Sbjct 170355 AGGTCTCGCGCAGCACCGGCTCCAGCGACGGGTGCA-----GGGTG--TCGACGGG---- 170403 Query 38736 CCTGCTGCCCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCATGCCCATCGGACCCG 38795 | ||| | ||| ||||| | | || || ||| ||| || ||||||| |||| Sbjct 170404 CTTGC-GGCCGAACTTGCAGTCGACGAAG-CCGT---CGA--TGTTGTCCATCGGGCCCG 170456 Query 38796 GACGGTACAGCGCCACGACGGCGGAGATGTCCTCGAACTGGTCCGGCTTCAGCAGGCGGA 38855 | ||||| |||| | | |||| ||| ||||| | | | | || || | ||| | Sbjct 170457 GCCGGTAGAGCGAGATCAGCGCGGTGATCTCCTCCAGCGAGCCGGGGCGCATCTTGCGCA 170516 Query 38856 GCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAACACCGAGAGCGTGTCGCCCCTGGCCA 38915 | | |||||| | || ||||||||||||||| || ||| | |||| ||| Sbjct 170517 GGGTGTCGCGCATGCCCTGGCTTTCGAGCTGGAACACCCCGACCGTCTGGCCCGACCCCA 170576 Query 38916 GCAGCTCGTACGTCGCGGGGTCATCCAGCGG 38946 ||||||||| |||| | || |||||||| Sbjct 170577 TCAGCTCGTAGGTCGGCTGATCGTCCAGCGG 170607 >seq9689 Length=17130 Score = 150 bits (166), Expect = 6e-32 Identities = 258/371 (70%), Gaps = 10/371 (3%) Strand=Plus/Minus Query 39386 AGCACGCGGGCCGCGTC---CTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCGCG 39442 ||||||||| | | ||| | || ||| ||| |||| || | |||||| || | Sbjct 9397 AGCACGCGGCCGGAGTCGCGCACCACCGCCTTGGCGGCCATGGT---GCCGTAGGTGATG 9341 Query 39443 ATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGG 39502 ||||| ||| |||| |||||||| | |||||| |||||| ||| | ||| Sbjct 9340 ATCTGGCTGACGCGCTCGCGCCCGTACTTGCGCGCGACGTAGTCGATCACCTCGTCGCGG 9281 Query 39503 CGACGGTCATC--GAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGA 39560 || | ||| |||||||||||| | ||||||||| || ||||| || || || |||| Sbjct 9280 CG--GTCCATGCAGAAGTCGATGTCGAAGTCGGGCATCGACACGCGTTCGGGATTGAGGA 9223 Query 39561 ACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACG 39620 | |||||||| | || || || | |||||||| ||||||||| || || ||| Sbjct 9222 ATCGCTCGAACAGCAGGTTGTACGGCAGCGGGTCCAGATCGGTGATCTTCAGCGCCCACG 9163 Query 39621 CGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCG 39680 | ||||||| || || | || ||||| || ||||||| | | || | | ||| Sbjct 9162 CCACCAGCGAACCGGCACCCGAACCACGGCCCGGGCCGATCGGAATGCCCTGGTTCTTGC 9103 Query 39681 CCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCA 39740 |||| |||||||||||| |||| |||||||| |||||| ||||||| | |||| Sbjct 9102 CCCACTGGATGAAGTCGGCCACGATCAGGAAGTAGCCCGGGAAGCCCATCTTGATGATGG 9043 Query 39741 TGTCGATCTCG 39751 ||| || |||| Sbjct 9042 TGTTGAGCTCG 9032 Score = 131 bits (144), Expect = 5e-26 Identities = 240/347 (69%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 38349 CCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGC 38408 |||||| ||| |||||||||| |||| ||||||||||| |||||| |||| || Sbjct 10443 CCGAGGACAGCGTGGCCGCCATGAACTCAGCCGGGTAGTGGCGCTTCAGCCACGCGGTCT 10384 Query 38409 GGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGG 38468 ||||| || ||| | || || || | ||||| |||||||||| |||| |||||||| Sbjct 10383 GGTAGCTGACCAGTGCATAGGCAGCGGCGTGCGACTTGTTGAAGCCGTAACCGGCGAACT 10324 Query 38469 GTACGAGCACGTCCCACACCGC-CCGG--ATGGCAGCGTCCGAGTAGCCTCGCTCGCTTG 38525 | | || ||| | | ||| ||| |||| ||||| | | || || | | Sbjct 10323 TCTCCATCAGGTCGAAGATCGCATCGGCCTTGGCTTCGTCC--ACACCGTC-CTTGGCCG 10267 Query 38526 CTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGG 38585 | || | ||||| || || | |||||||| | | ||| |||||||||||| | Sbjct 10266 CACCTTCGCGGAAGATCTCGCGGTGCTTGGCCATTTCGGCCGGCACCTTCTTGCCCATCG 10207 Query 38586 CGCGACGGAGAAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCT 38645 |||| || || |||||||| || || | ||| ||| | | |||||||||| || | Sbjct 10206 CGCGGCGCAGCAGGTCGGCGCCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCA 10147 Query 38646 GCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGATC 38692 ||||||||||||||| | |||| ||| |||| | ||||||| Sbjct 10146 TCACCTGCTCCTGGTACACCATGATGCCGTAGGTGTCCTTCAGGATC 10100 >seq9026 Length=54586 Score = 138 bits (152), Expect = 4e-28 Identities = 237/343 (69%), Gaps = 6/343 (2%) Strand=Plus/Plus Query 39442 GATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39501 |||||| || || ||||| |||||||||||| || || |||||| || | Sbjct 21687 GATCTGGGCCACGCGGTCGCGGCCGTACTTCTCCTGAACATAGGAGATCACCTCTTC--- 21743 Query 39502 GCGACGGTCATCG---AAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAG 39558 |||||| || | | ||||||| ||| | ||||||||| || || || || || || || Sbjct 21744 GCGACGCTCCTGGCAGAAGTCGACGTCGAAGTCGGGCATCGAAACCCGTTCGGGATTGAG 21803 Query 39559 GAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTA 39618 |||||||||||| | || || | | ||||||||||||||||| || | | Sbjct 21804 GAACCGCTCGAACAGCAGACCAAAGCGCAGCGGGTCCAGGTCGGTGATGGTCAGTACCCA 21863 Query 39619 CGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTT 39678 ||| ||||||| || || | ||||| || || |||||||| | ||||| | |||| Sbjct 21864 GGCGACCAGCGACCCGGCGCCCGAGCCCCGTCCGGGGCCGACGGGAATACCGTGCGCCTT 21923 Query 39679 CGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGAT 39738 |||| |||||| || | |||| |||||||| ||||| ||||||| | ||| Sbjct 21924 ACCCCATTTGATGAAATCCGACACGATCAGGAAGTAGCCGGGGAAGCCCATCTTCTCGAT 21983 Query 39739 CATGTCGATCTCGTAGTCGACCTGCGTTCGGTGCTCGTCGTCG 39781 ||| ||| |||| | |||| | | | | || ||| || ||| Sbjct 21984 GATGCCGAGCTCGAAATCGAGCCGTTTCCAGTACTCTTCCTCG 22026 Score = 100 bits (110), Expect = 9e-17 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 38556 CCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGGG 38615 ||| | |||| ||||||||||||||||||||| || ||||||||||| | || ||| Sbjct 20846 CCATCTCCTCCTTCTTCTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCTTCGCCCAGGC 20905 Query 38616 TGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGA 38675 |||| || ||||| ||||| || || | |||||| ||||| |||| ||||| ||| Sbjct 20906 TGTAGCCCGCCAGAATCTGGGCGATCTGCATCACCTGTTCCTGATAGACGATGACGCCGT 20965 Query 38676 AGGTC 38680 ||||| Sbjct 20966 AGGTC 20970 >seq6714 Length=1758414 Score = 138 bits (152), Expect = 4e-28 Identities = 219/312 (70%), Gaps = 4/312 (1%) Strand=Plus/Plus Query 39442 GATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39501 ||||||| |||||| ||||| |||||| || | ||||| |||||||| || | || Sbjct 59298 GATCTGTCCGACCTGGTCGCGGCCGTATTTGGCCTGTACGTAGCGGATCACCTCTTCGCG 59357 Query 39502 GCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGG 39559 |||| | | || |||||||||||| | ||||||||| |||||||| || || || ||| Sbjct 59358 GCGATCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGAGACGCGGTCGGGATTAAGG 59415 Query 39560 AACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTAC 39619 || |||||||| | ||| | | | || || | |||||||| || ||||| Sbjct 59416 AAGCGCTCGAACAGCAGCGAGAAGCGCAGCGGATCGACATCGGTGATGAGAAGCGCGTAG 59475 Query 39620 GCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTC 39679 || ||||||| || || | |||||||| || |||||||| | | | | ||| Sbjct 59476 GCAACCAGCGAACCCGCACCCGAGCCACGGCCCGGGCCGACAGGAATGTCATGTTGCTTG 59535 Query 39680 GCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATC 39739 ||||| ||||||||| | |||| ||||| || |||||| ||| | | ||| Sbjct 59536 GCCCATTTGATGAAGTCCGACACGATCAGGAAATAGCCGGGGAACTTCATGCGCTGGATG 59595 Query 39740 ATGTCGATCTCG 39751 ||| |||||||| Sbjct 59596 ATGCCGATCTCG 59607 Score = 80.6 bits (88), Expect = 9e-11 Identities = 76/97 (78%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 38571 TCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGA 38630 ||||||||||||||||||| || | | ||||||||||||||| ||||| || || || Sbjct 58472 TCTTCTTGCCCATGGCGCGGCGCAACAAGTCGGCCTGACCGAGCGTGTAGCCCGCAAGCT 58531 Query 38631 TCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGAT 38667 ||||| || | |||||| |||||||||| ||| Sbjct 58532 CTTGCGCGATCTGCATCACCTGTTCCTGGTAGACGAT 58568 >seq9683 Length=137075 Score = 136 bits (150), Expect = 1e-27 Identities = 259/377 (69%), Gaps = 12/377 (3%) Strand=Plus/Minus Query 39381 TGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCG 39440 |||||||||||||| || |||| || || ||| || || ||||| | || | Sbjct 109702 TGTCCAGCACGCGGCCCACGTCGCGGATGGCCGCGCGCGCGGCCATGGTGCCGAAGGTGG 109643 Query 39441 CGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCAC 39500 ||||||| ||| ||||| ||||||| || | || || ||| ||| | | | Sbjct 109642 CGATCTGGCTGACGGCGTCGCGGCCGTACAGCTGCTTCACATAGTCGATGACGCGGTCGC 109583 Query 39501 GGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAG 39558 || | | | || |||||| | ||| | |||||||||||| || ||||| || || || Sbjct 109582 GGTTGGCCTGGCA--GAAGTCCACGTCGAAGTCGGGCATGGACACACGCTCGGGATTGAG 109525 Query 39559 GAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTA 39618 ||| |||||||| | || || | ||||||||||| |||||| ||| |||| Sbjct 109524 GAAACGCTCGAACAGCAGGTTGTATTCCAGCGGGTCCAGGTCCGTGATCTTGAGCACGTA 109465 Query 39619 CGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCAC---ACA-CCGTTCT 39674 || |||||||||| || | || || || || | ||||||| ||| ||||| Sbjct 109464 GGCCACCAGCGAGCCGGCGCCCGATCCGCGGCC----CGGACCCACGGGACAGCCGTTGA 109409 Query 39675 CCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGT 39734 ||| ||||| |||||||||| | |||| ||||||||| ||| || ||||||| | Sbjct 109408 GCTTGGCCCACTTGATGAAGTCGCCCACGATGAGGAAGTAGCCCGGAAAGCCCATCTTGA 109349 Query 39735 TGATCATGTCGATCTCG 39751 ||| || |||||||| Sbjct 109348 GGATGGTGCCGATCTCG 109332 Score = 111 bits (122), Expect = 5e-20 Identities = 230/337 (68%), Gaps = 9/337 (3%) Strand=Plus/Minus Query 38373 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 38432 ||||||||| ||||||| |||||| | |||||| | ||||| | || ||| || | Sbjct 110713 ACTCGGCCGTGTAGTGCACCTTCAGCCAGGCCGTGTGATAGGCCAGCAGCGAGTAGGCGG 110654 Query 38433 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCC- 38491 | | ||||| |||||||||| |||| || ||||| | | || ||| | ||| | Sbjct 110653 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAGGTCGAAGACCTCGT 110594 Query 38492 CGGA--TGGCAGCGTCCGAGTAGCCTCGCTCGCTTGCTCCCTTCTGGAAGTTCACGAACT 38549 ||| | | || | || ||| ||| | || |||| ||||| || || | Sbjct 110593 CGGCCTTTTCCTCG-CTGAT--GCCCTGCTTGGCCGCGCCCTCGCGGAAGATCCCGCGGT 110537 Query 38550 CCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGAC 38609 | || ||| ||||| |||||||||||||||||| || || | |||||||| | Sbjct 110536 GCATGACCATTTCCTCGACCTTCTTCTTGCCCATGGCACGGCGCAAGAGGTCGGCGCCGC 110477 Query 38610 CGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 38669 | || | ||| ||| |||| | ||| || | || | ||||||||||||||||| |||| Sbjct 110476 CCAGCGAGTAGCCGCCCAGCACCTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGA 110417 Query 38670 GCCCGAAGGTCGGGTCCAGGA---TCTCGGCCAGCGG 38703 |||| |||| | |||| | | ||| ||||||| Sbjct 110416 TCCCGTAGGTTTCGGCCAGCACCTTTTCGACCAGCGG 110380 >seq7278 Length=293576 Score = 129 bits (142), Expect = 2e-25 Identities = 235/342 (69%), Gaps = 4/342 (1%) Strand=Plus/Plus Query 39375 AGGGCTTGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGT 39434 ||||| | |||||||||||| | |||| || ||| || |||| | | ||| Sbjct 266443 AGGGCATTTCCAGCACGCGGCCGACGTCGCGCAAAGCGGCACGCGCCTGCAGCGAACCGA 266502 Query 39435 ACGTCGCGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGT 39494 | || |||||| || |||| || | ||| || || | || || |||||||| | Sbjct 266503 AGGTGATGATCTGCGCCACCTGCTCACGGCCATATTTGGCCTGCACATAGCGGATCACCT 266562 Query 39495 CGCCACGGCGA--CGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGG 39552 | | |||||| | | || ||||||||| || | ||||||||| || ||||| ||||| Sbjct 266563 CCTCGCGGCGATCCTGGCA--GAAGTCGATATCGAAGTCGGGCATCGATACGCGTTCAGG 266620 Query 39553 GTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAG 39612 || ||||| || ||||| | ||| | | | | || || | |||||||||| || Sbjct 266621 ATTGAGGAAGCGTTCGAATAGCAGCGAGAAACGCAGCGGATCGACGTCGGTGATCGTCAG 266680 Query 39613 GGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTT 39672 || || ||| | |||||||| || | || ||||| || ||||| ||| | | | Sbjct 266681 CGCATAAGCGACGAGCGAGCCGGCACCCGAACCACGGCCCGGGCCAACCGGAATGTCATG 266740 Query 39673 CTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTA 39714 || ||| ||||| |||||||||||| |||| |||||| || Sbjct 266741 CTGCTTGGCCCATTTGATGAAGTCGGCAACGATGAGGAAATA 266782 >seq4285 Length=661 Score = 93.3 bits (102), Expect = 1e-14 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 38538 AGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAA 38597 |||||||| | |||||||| |||||| |||||||||||||||||| || || || | Sbjct 425 AGTTCACGG--TGCTTGGCCATTTCCTCGGCCTTCTTCTTGCCCATGGCCCGGCGCAGCA 482 Query 38598 GGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCT 38657 |||||| ||| || | ||| || | | | ||||||| || | ||||||||||| Sbjct 483 AGTCGGCGCCACCCAGCGAGTAGCCACCGATCACCTGCGCCATCTGCATCACCTGCTCCT 542 Query 38658 GGTAGATGATGAGCCCGAAGGTC 38680 |||||| |||| ||| ||||| Sbjct 543 GGTAGACCATGATGCCGTAGGTC 565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160211344981850