Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_028979.1 Length=57253 Score E Sequences producing significant alignments: (Bits) Value seq6602 82.4 3e-11 >seq6602 Length=331455 Score = 82.4 bits (90), Expect = 3e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 44308 CAAGCCCGGCGGCGTCGTGCTCGACCCGTTCCACGGTTCCGGCACAACGGGTCTGGTGGC 44367 |||||| || | | ||||||||||||||||| |||||||||||| |||||| || || Sbjct 139629 CAAGCCGGGTGACATCGTGCTCGACCCGTTCTTCGGTTCCGGCACCACGGGTGCCGTCGC 139688 Query 44368 GCTCGGTCTCGGCCGCCGCTACGTCGGCATCGAGC 44402 | |||||||| | || |||||||||||||| Sbjct 139689 AAAACGCCTCGGCCGTCACTTCGTCGGCATCGAGC 139723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183055259173970