Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_029066.1
Length=48666
Score E
Sequences producing significant alignments: (Bits) Value
seq1182 205 3e-48
seq11465 96.9 1e-15
>seq1182
Length=446
Score = 205 bits (226), Expect = 3e-48
Identities = 193/246 (78%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 23890 GCTCCGGGACAAGCTGTGGCGCCTGAACAACCTGTATTTCATCACCGACAAGGCAGGCAA 23949
|||||||||| | | ||||| |||||||||||||| |||||||| |||||| |||||
Sbjct 247 GCTCCGGGACCGGTTCTGGCGGCTGAACAACCTGTACTTCATCACGGACAAGCAGGGCAA 188
Query 23950 GAAGACTCGCTTCCGCATGACAGCGGAGCAGTTGGAGTATTTCGAAGGCCTGCACACTCG 24009
|||| |||||||||||||| ||||||| | || || ||| | || ||||||| ||
Sbjct 187 GAAGGTCCGCTTCCGCATGACGCAGGAGCAGGTCGATTACTTCCAGGGGATGCACACCCG 128
Query 24010 GAACATCATCCTGAAGGCACGCCAGCTCGGCTTTACGACTGAGCAGTGCATCATTCAACT 24069
||||||||||| ||||| | ||||| || || || || |||||| | || ||
Sbjct 127 CAACATCATCCTCAAGGCCAGGCAGCTTGGGTTCACTACCCTAGTCTGCATCGTCCAGCT 68
Query 24070 GGACGCGGCGCTGTTCGAGTCGGCCAAGTGCGCGCTGATTGCTCACACCCTGAATGATGC 24129
||| || |||||||||||| | ||||||||||| ||||| || ||||||||||| || ||
Sbjct 67 GGATGCCGCGCTGTTCGAGGCCGCCAAGTGCGCCCTGATAGCCCACACCCTGAACGACGC 8
Query 24130 CAAGCG 24135
||||||
Sbjct 7 CAAGCG 2
>seq11465
Length=2819
Score = 96.9 bits (106), Expect = 1e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 24277 CGGCACGCTGCGTTACCTGCACGTCTCCGAGTTCGGAAAGATCTGCGCCAAGTTTCCGCA 24336
||||||||||| ||||||||||||||||| | ||| |||||||||||||| | |||| |
Sbjct 2458 CGGCACGCTGCAGTACCTGCACGTCTCCGAATACGGCAAGATCTGCGCCAAATATCCGGA 2399
Query 24337 CAAGGCGCGCGAG 24349
|||||||||||||
Sbjct 2398 CAAGGCGCGCGAG 2386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155581773016024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |