Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq6889 145 2e-29
seq899 143 6e-29
seq504 140 8e-28
seq3764 136 9e-27
seq11974 118 3e-21
seq15059 107 5e-18
seq12661 107 5e-18
seq11467 107 5e-18
seq11246 107 5e-18
seq12713 104 6e-17
seq6789 104 6e-17
seq9910 93.3 1e-13
seq7320 91.5 4e-13
seq1025 91.5 4e-13
seq7937 89.7 1e-12
seq6860 89.7 1e-12
seq5233 87.8 4e-12
seq13554 86.0 1e-11
seq6579 86.0 1e-11
>seq6889
Length=11136585
Score = 145 bits (160), Expect = 2e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || || || || || |||| |||||||| | | ||| | ||||||
Sbjct 1034252 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1034311
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | || ||||| || ||||| |||||||| ||
Sbjct 1034312 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 1034371
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||||||||| || ||||| || | ||||| |||
Sbjct 1034372 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1034431
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| |||| ||||| | ||| | |||||||||
Sbjct 1034432 TTGCCGGTCAGGGTTTTCACGAAGATTTGCATTTT 1034466
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564
|| ||||| || || || ||||| |||| |||||||| | | ||| | | ||||||
Sbjct 1034027 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCAATCTTCC 1034086
Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624
|||||||| || || ||||| || | || ||||| || ||||| |||||||| || |||
Sbjct 1034087 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGG 1034146
Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684
||||| |||||| ||||||||||| || || || || | ||||| ||||||
Sbjct 1034147 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTG 1034206
Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||| || || | ||| | |||||
Sbjct 1034207 CCGGTCAGGGTCTTCACGAAGATCTGCAT 1034235
>seq899
Length=2520420
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| |||||||| ||||| |||| ||||| || | || || | |||||||
Sbjct 2264645 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2264704
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| ||||| || ||||| || | || ||||| || || || || || ||||||
Sbjct 2264705 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 2264764
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || ||||| || | ||||| |||
Sbjct 2264765 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 2264824
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||||||| || || | ||| | |||||
Sbjct 2264825 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2264856
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| |||||||| ||||| |||| ||||| || | || || | |||||||
Sbjct 2264873 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2264932
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| ||||| || ||||| || | || ||||| || || || || || ||||||
Sbjct 2264933 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 2264992
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || ||||| || | ||||| |||
Sbjct 2264993 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 2265052
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||||||| || || | ||| | |||||
Sbjct 2265053 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2265084
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| |||||||| ||||| |||| ||||| || | || || | ||||||
Sbjct 2265101 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCT 2265160
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| ||||| || ||||| || | || ||||| || || || || || ||||||
Sbjct 2265161 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 2265220
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || ||||| || || ||||| |||
Sbjct 2265221 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTC 2265280
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||||||| || || | ||| | |||||
Sbjct 2265281 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2265312
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| | ||| |||||||| ||||| |||| ||||| || | || || | ||||||
Sbjct 2264416 CAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 2264475
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| ||||| || ||||| || | || ||||| || || || || || |||||
Sbjct 2264476 TTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTC 2264535
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| || ||||||||||| || ||||| || | ||||| ||
Sbjct 2264536 TTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 2264595
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||||||| || || | ||| | |||||
Sbjct 2264596 CTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2264628
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| |||||||| ||||| |||| ||||| || | || || | |||||||
Sbjct 2265329 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2265388
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| ||||| || ||||| | | |||||||| || || || ||||| || |||
Sbjct 2265389 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGGATGCCTTCTTTTTCT 2265448
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| ||| ||||||||||| | ||||| || | || || ||
Sbjct 2265449 TGTATCTTCACCTTGACATTCTCGATGGTGTCACTTGGCTCCACCTCCAGAGTAATGGTT 2265508
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || || | || |||| || | ||||||
Sbjct 2265509 TTACCAGTGAGGGTCTTTACAAAGATCTGCATT 2265541
>seq504
Length=1076656
Score = 140 bits (154), Expect = 8e-28
Identities = 166/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| || || | |||||| | || ||||| | ||||| || | ||||||
Sbjct 268499 ACGAAGTCTCAACACTAGACGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGT 268440
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||||| ||||| |||| ||| ||||| || ||||| ||
Sbjct 268439 ACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCC 268380
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| |||| || ||| | || || |||| || ||||| |
Sbjct 268379 TTCCTTATCCTGGATCTTGGGCTTTACGTTTTCTGTTGTATCCGAGGGCTCGACGTCAAG 268320
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| || |||| || || | ||| | ||||| ||
Sbjct 268319 AGTGATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCATCTT 268275
>seq3764
Length=1885950
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| || || || |||||||| || ||||| | ||||| || | ||||||
Sbjct 1780313 ACGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 1780254
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||| | ||||| |||| ||| ||||| || ||||| ||
Sbjct 1780253 ACGTCCATCTTCCAGTTGCTTGCCAACAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCC 1780194
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| | | || || || |||| || || || |
Sbjct 1780193 TTCCTTATCCTGGATCTTGGCCTTTACATTTCCTATTGTATCCGAGGGCTCGACCTCAAG 1780134
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||||| ||||| ||| ||| || || | |||
Sbjct 1780133 AGTGATGGTCTTCCCCCTCAGGGTCTTCACGAA 1780101
>seq11974
Length=740964
Score = 118 bits (130), Expect = 3e-21
Identities = 161/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| | ||| | |||||||| || ||||| | ||||| || | ||||||
Sbjct 250285 ACGAAGTCTCAACAAAAGATCAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 250226
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||||| || ||||| ||||| ||||| |||| ||| ||||| || ||| ||
Sbjct 250225 ACATCCATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAGCTCC 250166
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| | |||| ||| ||| ||| ||| |||| || ||| || || ||
Sbjct 250165 TTCCTTACCCTGGACCTTGACCTTTACATTTTCTATGGGATCCAAGGGCTCGACCTCAGG 250106
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| ||||||| || || | ||| | ||||| ||
Sbjct 250105 AGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATCTT 250061
>seq15059
Length=16498
Score = 107 bits (118), Expect = 5e-18
Identities = 128/174 (74%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| | || || || || | || || ||||| || || || ||||||||| | || ||
Sbjct 5478 CCAAATCTATAATGTAGTTGTAACCGCCCATGCGTTCGTAATAATTTTCTTTATAGTAAT 5537
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| |||| || || || ||||| ||||| | || ||| | || ||||| || |||||
Sbjct 5538 ACCTATTATAATTGGAGGATTCGGCAATTGGCTAGTCCCTCTGATAATTGGAGCCCCTGA 5597
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724
||| || || || || | ||||||||||| |||||| | || || ||||||||
Sbjct 5598 TATAGCATTCCCTCGGATAAACAATATAAGCTTTTGACTTCTTCCCCCTTCCTT 5651
>seq12661
Length=3984070
Score = 107 bits (118), Expect = 5e-18
Identities = 140/191 (73%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || ||||| ||||| |||| |||||| || | |||||| |||||
Sbjct 2676666 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAAAGTGAGGCCATCC 2676607
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || || || ||||| || | || ||||| || || || || |||||||||
Sbjct 2676606 TCCAGCTGTTTGCCCGCAAAGATCAGACACTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 2676547
Query 225622 TGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||| ||| |||| ||| || | ||||| || || || || | ||||| ||
Sbjct 2676546 TGGAT-TTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 2676488
Query 225681 CTTGCCCGTCA 225691
|||||||||||
Sbjct 2676487 CTTGCCCGTCA 2676477
>seq11467
Length=2875560
Score = 107 bits (118), Expect = 5e-18
Identities = 128/174 (74%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| | || || || || | || || ||||| || || || ||||||||| | || ||
Sbjct 2840760 CCAAATCTATAATGTAGTTGTAACCGCCCATGCGTTCGTAATAATTTTCTTTATAGTAAT 2840819
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| |||| || || || ||||| ||||| | || ||| | || ||||| || |||||
Sbjct 2840820 ACCTATTATAATTGGAGGATTCGGCAATTGGCTAGTCCCTCTGATAATTGGAGCCCCTGA 2840879
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724
||| || || || || | ||||||||||| |||||| | || || ||||||||
Sbjct 2840880 TATAGCATTCCCTCGGATAAACAATATAAGCTTTTGACTTCTTCCCCCTTCCTT 2840933
>seq11246
Length=432969
Score = 107 bits (118), Expect = 5e-18
Identities = 128/174 (74%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| | || || || || | || || ||||| || || || ||||||||| | || ||
Sbjct 81668 CCAAATCTATAATGTAGTTGTAACCGCCCATGCGTTCGTAATAATTTTCTTTATAGTAAT 81727
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| |||| || || || ||||| ||||| | || ||| | || ||||| || |||||
Sbjct 81728 ACCTATTATAATTGGAGGATTCGGCAATTGGCTAGTCCCTCTGATAATTGGAGCCCCTGA 81787
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724
||| || || || || | ||||||||||| |||||| | || || ||||||||
Sbjct 81788 TATAGCATTCCCTCGGATAAACAATATAAGCTTTTGACTTCTTCCCCCTTCCTT 81841
>seq12713
Length=1138196
Score = 104 bits (114), Expect = 6e-17
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 7573 ACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTC 7632
|| || ||||| || || || ||||||||| | || || || |||| || || || |||
Sbjct 32835 ACCGCCCATGCATTCGTAATAATTTTCTTTGTAGTAATACCTATTATAATTGGAGGATTC 32776
Query 7633 GGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAAC 7692
|| || ||| | || ||| | || ||||| || |||||||| || || || || | |||
Sbjct 32775 GGCAACTGACTGGTCCCTCTGATAATTGGAGCCCCTGATATAGCATTCCCTCGGATAAAC 32716
Query 7693 AATATAAGTTTTTGATTACTACCGCCTTCCTT 7724
|||||||| |||||| | || || ||||||||
Sbjct 32715 AATATAAGCTTTTGACTTCTTCCCCCTTCCTT 32684
>seq6789
Length=3346786
Score = 104 bits (114), Expect = 6e-17
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 7573 ACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTC 7632
|| || ||||| || || || ||||||||| | || || || |||| || || || |||
Sbjct 1241147 ACCGCCCATGCATTCGTAATAATTTTCTTTATAGTAATACCTATTATAATTGGAGGATTC 1241206
Query 7633 GGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAAC 7692
|| || ||| | || ||| | || ||||| || |||||||| || || || || | |||
Sbjct 1241207 GGCAACTGACTAGTCCCTCTGATAATTGGAGCCCCTGATATAGCATTCCCTCGGATAAAC 1241266
Query 7693 AATATAAGTTTTTGATTACTACCGCCTTCCTT 7724
|||||||| |||||| | || || ||||||||
Sbjct 1241267 AATATAAGCTTTTGACTTCTTCCCCCTTCCTT 1241298
>seq9910
Length=308115
Score = 93.3 bits (102), Expect = 1e-13
Identities = 104/138 (75%), Gaps = 1/138 (1%)
Strand=Plus/Plus
Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784
|| || | ||| |||||| || || ||||| ||| ||||||||||||| |||||||||
Sbjct 260353 ATGTCAAAGGTGGGTAAGGTTTTTCGCGTTGCATCGAATTAAACCACATCATCCACCGCT 260412
Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG- 7843
| | | |||||| || ||||||||||||| |||||| |||| | | |||| ||
Sbjct 260413 TGTGCGGGTCCCCGTCAATTCCTTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGGT 260472
Query 7844 AATATTTACGCGTTAGCT 7861
| || |||||||||||
Sbjct 260473 CAACTTCACGCGTTAGCT 260490
Score = 84.2 bits (92), Expect = 5e-11
Identities = 84/105 (80%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| | || |||||||| ||| ||||| | |||| ||| | || ||| | |||||
Sbjct 261053 TGAGAGGACGACCAGCCACACTGGAACTGAGACACGGTCCA-GACTCCTACGGGAGGCAG 260995
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| |||| || |||||||||||||||| ||||| || ||||
Sbjct 260994 CAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCAATG 260950
>seq7320
Length=4144
Score = 91.5 bits (100), Expect = 4e-13
Identities = 93/120 (78%), Gaps = 1/120 (1%)
Strand=Plus/Minus
Query 7743 ATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTCCGTCAG 7802
||||| ||||| || ||||||||||||| ||||||||||| | || | ||||||
Sbjct 485 ATTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCAGGCCCCCGTCAA 426
Query 7803 TTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA-ATATTTACGCGTTAGCT 7861
|| ||||||||||||| |||||| |||| | | |||| ||| | || | |||||||||
Sbjct 425 TTCCTTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGGATAACTTAATGCGTTAGCT 366
>seq1025
Length=2374245
Score = 91.5 bits (100), Expect = 4e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530
|||| || |||||||| || || || |||||||| || || |||||||| ||||||||
Sbjct 924587 AATACCTGTCCATCAGTGATGGAAATGACATTTGTTGGAATGTAAGCAGACACATCACCA 924528
Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||| ||||||| || |||| || || | || ||||||||||||
Sbjct 924527 GCTTGCGTTTCGATGACTGGTAGAGCAGTCAAGGAGCCACCACCAAAA 924480
Score = 84.2 bits (92), Expect = 5e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076
||||||| ||||| || || || | || ||| || |||||||||||||| |||||||
Sbjct 924140 CACTTCAGTACCTGGCTCCTTATTCTGGATGTTCAATGGGAGAATATTTTAGGGATAATG 924199
Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122
| ||||||||||| ||||| || || || ||| ||||| ||||
Sbjct 924200 GCAAACATGCTTTGATCATTTATGACGACTTATCCAAACAGGTCAA 924245
>seq7937
Length=1922352
Score = 89.7 bits (98), Expect = 1e-12
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| || || |||||||| || || || |||||||| || || |||||||| ||||||||
Sbjct 1424408 GAAGATCTGTCCATCAGTGATGGAAATGACATTTGTTGGAATGTAAGCAGACACATCACC 1424467
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||| |||| || || |||| || || | || ||||||||||||
Sbjct 1424468 AGCTTGCGTTTTGATGACTGGTAGAGCAGTCAAGGAGCCACCACCAAAA 1424516
>seq6860
Length=6169
Score = 89.7 bits (98), Expect = 1e-12
Identities = 90/113 (80%), Gaps = 3/113 (3%)
Strand=Plus/Plus
Query 6768 TGAGAGAATGATCAGCCACA-TTGGGACTGAAAACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | ||||||||| || ||| | |||||
Sbjct 1232 TGAGAGGATGATCAGCCACAATTGGGACTGGACACGGCCCAAA-CTCCTACGGGAGGCAG 1290
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878
|||||| ||||||| ||||||||| | || | ||||| || ||| |||||
Sbjct 1291 CAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGA 1343
Score = 87.8 bits (96), Expect = 4e-12
Identities = 103/138 (75%), Gaps = 1/138 (1%)
Strand=Plus/Minus
Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784
|| || |||| ||||||| |||| ||||| || ||||||||||| | ||||||||||
Sbjct 1907 ATGTCAAGGGCTGGTAAGGTTCTGCGCGTTGCGTCGAATTAAACCACCTGCTCCACCGCT 1848
Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844
| | |||||| || ||||||||||||| |||||| |||| | | |||| |||
Sbjct 1847 AGAGCGGGCCCCCGTCAATTCCTTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGGA 1788
Query 7845 AT-ATTTACGCGTTAGCT 7861
|| || | |||||| ||
Sbjct 1787 ATGCTTAAAGCGTTAACT 1770
>seq5233
Length=2008183
Score = 87.8 bits (96), Expect = 4e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| | ||||| ||||| ||||| |||| ||| || ||||| ||||| ||||
Sbjct 1606586 CCATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCGGGAGGAATTCCTTTT 1606645
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|| ||||||||||| ||| ||| ||| || | ||||||| || || || |||
Sbjct 1606646 TTATCTTGGATCTTGGCCTTTACATTTTCTATTGCATCTGAGGGTTTGACTTCGGGAGTG 1606705
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| | ||| | |||| || || ||||| | ||||| ||
Sbjct 1606706 ATGGACTTTCTTGTCAGGGTCTTCATGAAAATCTGCATCTT 1606746
>seq13554
Length=1007
Score = 86.0 bits (94), Expect = 1e-11
Identities = 89/113 (79%), Gaps = 3/113 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| |||||||| |||| ||| ||||| | |||| ||| | || ||| | |||||
Sbjct 206 TGAGAGGATGATCAGTCACACTGGAACTGAGACACGGTCCA-GACTCCTACGGGAGGCAG 148
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878
|||||| ||||||| ||||||||||| |||| ||||| || ||| |||||
Sbjct 147 CAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGA 95
>seq6579
Length=1767599
Score = 86.0 bits (94), Expect = 1e-11
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||| | ||| | || || | || || || || || || || ||||||||| | | | |
Sbjct 100377 CAAATCTACGATGTAGTTGTAACTGCACACGCATTCGTAATAATTTTCTTTATAGCAAGG 100318
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| |||| || || || ||| | || ||| | |||| |||| | ||| ||||||||
Sbjct 100317 CCTATTATAATTGGAGGATTCAGCAACTGACTATTTCCCCTAATAACTGGATCTCCTGAT 100258
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC 7721
||||| ||||| || | ||||| |||||||||||| | || || ||||
Sbjct 100257 ATGGCATTTCCTCGGATAAACAACATAAGTTTTTGACTCCTCCCCTCTTC 100208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192301108930946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |