Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_030909.1
Length=50183
Score E
Sequences producing significant alignments: (Bits) Value
seq12569 870 0.0
seq6089 702 0.0
seq7029 145 2e-30
seq12437 120 1e-22
seq12095 116 1e-21
seq14232 107 6e-19
seq10221 93.3 1e-14
seq6988 91.5 5e-14
seq8050 87.8 6e-13
seq12839 86.0 2e-12
seq9425 80.6 9e-11
>seq12569
Length=80069
Score = 870 bits (964), Expect = 0.0
Identities = 1381/1974 (70%), Gaps = 76/1974 (4%)
Strand=Plus/Minus
Query 40 CGCCTATGAAGACTTCTTGCGAGCCAAGGT----CCGTCTCGCCGAGCCGAAAGGCTTCG 95
||||||| | |||||| || |||||||| ||| ||| ||| || ||||||
Sbjct 64166 CGCCTATCACGACTTCCTGGCGGCCAAGGTGCCGCCGGCTCCCCGCTGCG----GCTTCG 64111
Query 96 AGGTGAAGCCATCGGCCT--TCCATCCCCTGCTCAAGCCGCACCAGCGAGCCATCGCCAC 153
|| | |||| || || || |||| | |||||| || ||||| ||||| | |
Sbjct 64110 AGATCGAGCC--CGACCGGGTCAATCCGATCCTCAAGGACCATCAGCGGGCCATGGTCTG 64053
Query 154 CTGGCTGGTGCGCCAAGGCCGCGCGGCCTGTTTCGCGGCCTTCGGCCTGGGCAAGTCGGT 213
|||| ||| || | ||||| || ||| ||||| |||||||||||||| || ||
Sbjct 64052 CTGGGCGGTCCGTCTCGGCCGGGCCGCCCTGTTCGCCGCCTTCGGCCTGGGGAAAAGCGT 63993
Query 214 AATGCAGCTTGAAGTGGTGCGCGTCACCCGCGACCTGGCCGGCGGCTACGCGCTCATCAC 273
| ||| | || | | ||| ||| ||||| | ||||||| | || |||
Sbjct 63992 CGTCCAGTTGGAGATTGCGCGGATCATGCGCGAGATCTCCGGCGGGATGGGCCTGATCGT 63933
Query 274 CATCCCGCTGGGTGTGCGCCAGGAGTTCTACCGAGACGCCGCGATGCTCGGCATCACCGT 333
||||||||| || ||||| || |||||| || |||||||| ||||| ||| | |||
Sbjct 63932 CATCCCGCTCGGCGTGCGGCAAGAGTTCATGCGGGACGCCGCCATGCTGGGCGTTCGCGT 63873
Query 334 CCGGTTCATCCGAAGTTTCGACGAGGTAGACGACCCCACCACCATCTACCTGACCAATTA 393
||||||||| || | |||| |||| ||||| ||| | ||||||||||||| ||
Sbjct 63872 CCGGTTCATTCGGCGGATCGAGGAGGCGGACGATCCCGGGGGCCTCTACCTGACCAACTA 63813
Query 394 CGAGACCGTCCGCGACGGCAAGCTCGACCCTCGCCGGTTCAGCGTGGCAAGCCTGGACGA 453
|||||| || || ||||||||||||||||| | | ||| || || ||||||||||
Sbjct 63812 CGAGACGGTTCGGGACGGCAAGCTCGACCCATCCTGTTTCGCGGTCGCCTGCCTGGACGA 63753
Query 454 AGCCAGTTGCCTTCGCGGCTTCGGCGGCAGCAAGACGTTCCGCGAGTTCATGGCTCTGTT 513
||||| || || |||||||||||| |||||| || |||||||||||| |||||
Sbjct 63752 GGCCAGCGTTCTGCGAGGCTTCGGCGGCTCCAAGACCTTTCGCGAGTTCATGCGCCTGTT 63693
Query 514 CGCTGGTGACGATCGCGCCGCCGGCATCCGCGGCGATGGCGTCCGGTACCGGTACGTGGC 573
|| | | | |||| || || | ||| ||
Sbjct 63692 CG---------ACCAGGTCGCC------------------------TATCGCTTCGTCGC 63666
Query 574 CACTGCCACGCCAAGCCCGAACGAATACATCGAGCTACTGGCTTACTCGGCCTTCCTCGG 633
||| |||||||| || ||||| | ||| ||||| || || || ||||| ||||| ||
Sbjct 63665 CACGGCCACGCCGTCGCCCAACGATTTCATAGAGCTGCTCGCCTATTCGGCGTTCCTGGG 63606
Query 634 CGTGATGGATGTCGGCCAGGCCAAGACCAGGTTCTTCAAACGCAACTCTGAGAAGGCCGA 693
||||||||||||||| |||||||||||| |||| ||| || || ||| | |||||
Sbjct 63605 CGTGATGGATGTCGGGCAGGCCAAGACCCGGTTTTTCCGGCGAGACAGCGAGCACGCCGA 63546
Query 694 CCAACTCACCATCCATGCCCACAAAGAGGGCGAGTTCTGGATGTGGGTGGCGTCCTGGGC 753
| |||||| | || | ||||||||| ||||||||||| ||||| || |||||
Sbjct 63545 CGCCCTCACCCTGCACCCGCACAAAGAGCGCGAGTTCTGGCTGTGGTGCGCAAGCTGGGG 63486
Query 754 GATCTTCGTTCAGCGCCCCAGCGACCTCGGGTTCAGCGACGAAGGCTACGCGCTACCGGA 813
| ||||| ||||| || ||||| ||||| ||| |||||| ||||||| || |||
Sbjct 63485 TCTGTTCGTCCAGCGGCCGAGCGATCTCGGCTTCTCCGACGACGGCTACGACCTGCCGCC 63426
Query 814 ACTGGACATCCGCTGGCACGAAGTACCGTCCGACCACTCGCACGCTGGCCATGAGCGTAA 873
||| | | || |||||||| ||| ||||| | ||| || || |
Sbjct 63425 CCTGCAGGTGATCTATCACGAAGTGCCGGTGGACCATCGGGCCGCCGGAACCGACAAGAG 63366
Query 874 TGGCCAGGGCCGCCTGCTTCGCAACACCGCCATTGGCGTGCAGGACGCCGCCGCAGAG-- 931
|||||||||||||| | | || || | |||||| | ||| || | ||
Sbjct 63365 CGGCCAGGGCCGCCTATTCCAGGACGATGCGGTCGGCGTG---GTCGCGGCGTCCAAGGT 63309
Query 932 -AAGCGCGAGAGCCTTCCTGCCAGGATCGCCAAACTGATGGAGATCCGGGCCGAGGCTCC 990
|||||||| | ||| ||| | ||| || || ||||||| || | | ||
Sbjct 63308 CAAGCGCGACACCCTGGAGGCCCGCATCCGGAAGATGCGCGAGATCCTCGCGGCCGACCC 63249
Query 991 AGATGCTCACCGGATCATCTGGCATGACCTCGAGGCGGAACGCCACGCGATCGAGGCCGC 1050
|| | | | ||| | ||||| || || ||||| || || ||||||||| |||
Sbjct 63248 CGAGGGGCGCTACATCCTGTGGCACGATCTGGAGGCCGAGCGGGCGGCGATCGAGCTCGC 63189
Query 1051 TATCCCCGACGCCGTCAGCGTCTACGGCGCCCAGGATCTGGAAGAGCGCGAACGCGCGAT 1110
| || ||| ||||||||| | |||| |||||||||| || | |||||||| |||||
Sbjct 63188 CCTGCCGAACGTCGTCAGCGTGTTCGGCTCCCAGGATCTTGAGGCGCGCGAACAGGCGAT 63129
Query 1111 TGTCCAGTTCAGCGACGGCGAGTTCCAGGAACTGGCTGCCAAGCCGGTGATCGCAGGCAG 1170
|||| ||||||||||||| ||| | | || || ||||||||||||||||| |||
Sbjct 63128 CGTCCTGTTCAGCGACGGCTGGTTTCCCTATCTCGCGGCCAAGCCGGTGATCGCCGGCTC 63069
Query 1171 CGGCTGCAACTTCCAGCGCCACTGCTCGTGGGCCATCTACCTGGGCATCGGCTTCAAGTT 1230
|||||||||||||||||||| ||| ||| ||| |||||| ||||||||||| ||
Sbjct 63068 AGGCTGCAACTTCCAGCGCCATTGCCACAAGGCGGTCTTCCTGGGGATCGGCTTCAAATT 63009
Query 1231 CAACGACTTCATCCAGTCCATTCACCGCCTGCACCGATTCCTGCAGACCGGC--CGCGTG 1288
|||||||||||||||| | || |||||| | || |||||||||||| ||| | |||
Sbjct 63008 CAACGACTTCATCCAGGCGATCCACCGCATCCAGCGATTCCTGCAG--GGGCATCCCGTC 62951
Query 1289 CGCATCGACCTGATCTATACCGAGGCCGAGCGCGACATCCGCCG---CCAACTCGAACGG 1345
||| || ||||||| ||||| |||||||| | | | || || || || |
Sbjct 62950 GAGATCCACGTGATCTACGCCGAGAGCGAGCGCGCCGTGCTGCGGACCCTGCTGGA---G 62894
Query 1346 AAGTGGCAGCAGCACAACACCATGGTTCAGCGCATGACCGAGATCATCAAGCAGTACGGC 1405
|||||| ||||||| | |||| || ||||| || ||||||| | ||||||
Sbjct 62893 AAGTGGGCGCAGCACGAGGAAATGGCGAAGACCATGAGCGCGATCATCCGCGAATACGGC 62834
Query 1406 CTGTCCGTGGCCGCCATGGCACAGACCCTCACCCGCTCCATGGGCGT---GGAGCGCGTC 1462
|||||| |||| |||||| || ||||||||| |||||||||| ||| || ||
Sbjct 62833 CTGTCCAACGCCGACATGGCGAAGGTGCTCACCCGCGCCATGGGCGTGAAGGATCGGATC 62774
Query 1463 GAGATCAAGGGCAAGGACTACACCATCGTCAACAACGACACCGTGCTCGAAACCCGCCGC 1522
||| | | ||| | |||| | | || ||| | |||||||| ||||||| || ||
Sbjct 62773 GAGGTGACCGGCGACAACTATCGCTTGGTGAACGAAGACACCGTCGTCGAAACGCGACGG 62714
Query 1523 ATGGAAAGCAACAGCGTCGGCTTGACCATCACCAGCATCCCCTTCAGCACCCAGTACGAG 1582
||| ||||||| ||| ||| | ||||| ||||| ||| || |||||||||
Sbjct 62713 ATGCCGGCGGACAGCGTGGGCCTGATCGTCACCTCGATCCCGTTCTCGACGCAGTACGAG 62654
Query 1583 TACTCGCCGAACTACGCCGACTTCGGCCACACCGACGACAACGCGCACTTCT-TCGAGCA 1641
|| ||||||||||||||||| ||||| ||||||||||||||||| || |||| ||| ||
Sbjct 62653 TATTCGCCGAACTACGCCGATTTCGGACACACCGACGACAACGCCCATTTCTGGCGA-CA 62595
Query 1642 GATGGACTATCTGATCCCGGAACTGCTGCGCGTGACCATCCCCGGGCGTCTGGCCTGCAT 1701
|||||||| ||| |||||| |||||||||||| | || || || ||||| |||
Sbjct 62594 GATGGACTTTCTCGCCCCGGAGCTGCTGCGCGTGCTCGCGCCGGGCCGGGTGGCCGCCAT 62535
Query 1702 CCACGTGAAGGATCGCATCATTCCCGGCGGAATGACCGGCCTTGGCTTCCAGACCGTCTA 1761
|||||||||||| || ||| | || || || ||||||||||| ||||| |||||||||||
Sbjct 62534 CCACGTGAAGGACCGGATCGTGCCAGGGGGTATGACCGGCCTCGGCTTTCAGACCGTCTA 62475
Query 1762 CCCCTTCCACATGGAAGTGACT--CGAGC---CTTCGTCAAGCATGGCTGGGCCTATATG 1816
||| || | ||| |||| || || |||| |||| |||| ||||| |
Sbjct 62474 CCCGTT---CGCGGA--CGACTGCCGGGCGTGCTTCCGCAAGGCCGGCTTCGCCTACCTC 62420
Query 1817 GGCATGAAGACCATCGTCACCGACGTGGTTCGCGAGAACGCCCAGACCTACCGCCTTTCG 1876
||| ||||||| | | |||||||| || ||||||||| ||||||||| || ||
Sbjct 62419 GGCGAAAAGACCAACCTGACCGACGTCGTCCGCGAGAACAACCAGACCTATCGGCTGGGC 62360
Query 1877 TGGACGGAGCAGTGCAAGGACGGCACCAAGATGGGTGTCGGCATGCCCGAGTACTTGCTG 1936
|||| ||||||||||||||||| | ||||| | ||| |||| || | |||||
Sbjct 62359 TGGAGCGAGCAGTGCAAGGACGGATCGCGCATGGGCGCGGGCCTGCCGGAAAAGGTGCTG 62300
Query 1937 ATCTTCCGCAAGCCGCCCACCGACAACTCCAACGCCTACGGCGACGTGCCGGTG 1990
| ||||||||||||||| ||||| ||||||| |||| |||| |||||||
Sbjct 62299 CTGTTCCGCAAGCCGCCCTCCGACCTGTCCAACGGTTACGCCGACCGGCCGGTG 62246
Score = 190 bits (210), Expect = 7e-44
Identities = 250/344 (73%), Gaps = 2/344 (1%)
Strand=Plus/Minus
Query 2222 TACGACTTCGAGCACCACGTCCGCATCGGCGAATCGCTGGAGGTCACCGGGAAGCTGCCC 2281
||||||||||||||||||||| | |||||| ||||||| | | || || ||||
Sbjct 62083 TACGACTTCGAGCACCACGTCAAGGTGGGCGAAGCGCTGGACGCAAAAGGCAAATTGCCG 62024
Query 2282 ACCGGCTTCATGCTGCTTCCACCGCAGTCCTGGCACCCGGACGTATGGACCGACGTCGCC 2341
| ||||||| |||| || ||||| |||||| ||||| |||||||| ||||||
Sbjct 62023 CCGACCTTCATGTTGCTGCCGCCGCACAGTTGGCACGACGACGTCTGGACCGATGTCGCC 61964
Query 2342 CGCATGCGGACGCTCAACGCCCAGCAGTAC-AGCAAGGGCCAGGAAATGCACCTGTGCCC 2400
| |||| | |||||||| || ||| | |||| |||| ||||| ||||||||||||
Sbjct 61963 CAGATGCTGTCGCTCAACACCGTCCAGGCCCAGCA-GGGCGCGGAAAAGCACCTGTGCCC 61905
Query 2401 GCTGCAGTTCGACATCGTCGACCGGGCCATCGTGCAGTACTCCATGGAAGGAGACCTGGT 2460
|||| ||||| |||||||||||| ||| | |||| ||| | || ||| ||||
Sbjct 61904 CCTGCCCTTCGATATCGTCGACCGGCTGATCATCCAGTGTTCCGAGCCGGGCGACGTGGT 61845
Query 2461 CTTCGATCCCTTCGGCGGGATCATGACCGTCCCGTACTGCGCGCTGAAGCTCAAGCGCAG 2520
|||||||| |||||||| | |||||||| || || |||| | |||| | ||||
Sbjct 61844 GTTCGATCCGTTCGGCGGCCTGATGACCGTGCCCTATCGCGCCATCAAGCACGGGCGCGT 61785
Query 2521 AGCCCGCGCCCACGAACTGAACTCCCGCTACTTCCTGGACGGTG 2564
| | | || |||| |||||| | |||||| || |||||||
Sbjct 61784 CGGCTGGGCGAACGAGCTGAACCCGGCCTACTTTCTCGACGGTG 61741
>seq6089
Length=13452
Score = 702 bits (778), Expect = 0.0
Identities = 1153/1651 (70%), Gaps = 71/1651 (4%)
Strand=Plus/Minus
Query 380 TACCTGACCAATTACGAGACCGTCCGCGACGGCAAGCTCGACCCTCGCCGGTTCAGCGTG 439
||||||||||| || || | |||||||| |||||| |||||| | |||| |
Sbjct 4512 TACCTGACCAACTATGAATCTGTCCGCGAAGGCAAGATCGACCTGACGCATTTCAATGCC 4453
Query 440 GCAAGCCTGGACGAAGCCAGTTGCCTTCGCGGCTTCGGCGGCAGCAAGACGTTCCGCGAG 499
|| ||||||||||| ||||| ||||| || ||||||| |||||| |||||||||
Sbjct 4452 GCGTCGCTGGACGAAGCATCGTGCCTGCGCGGTTTTGGCGGCACCAAGACCTTCCGCGAG 4393
Query 500 TTCATGGCTCTGTTCGCTGGTGACGATCGCGCCGCCGGCATCCGCGGCGATGGCGTCCGG 559
|||||| ||||||| |||||| || ||
Sbjct 4392 TTCATGCGGCTGTTCGA------------------CGGCAT-----GCAATA-------- 4364
Query 560 TACCGGTACGTGGCCACTGCCACGCCAAGCCCGAACGAATACATCGAGCTACTGGCTTAC 619
|| || || ||||| |||||||| |||||||| || |||||||| ||||| ||
Sbjct 4363 TAA--GTTTGTCGCCACGGCCACGCCGTCGCCGAACGACTATATCGAGCTGCTGGCCTAT 4306
Query 620 TCGGCCTTCCTCGGCGTGATGGATGTCGGCCAGGCCAAGACCAGGTTCTTCAAACGCAAC 679
| |||||||| | | |||||||||||||||||||||||| |||||||||| || |||
Sbjct 4305 GCCGCCTTCCTGGAGATCATGGATGTCGGCCAGGCCAAGACCCGGTTCTTCAAGCGGAAC 4246
Query 680 TCTGAGAAGGCCGACCAACTCACCATCCATGCCCACAAAGAGGGCGAGTTCTGGATGTGG 739
|||||||||||| |||| ||||||||| | ||||| || | || |||||| |||||
Sbjct 4245 AGCGAGAAGGCCGACGAACTGACCATCCATCCGCACAAGGAAGAGGAATTCTGGCTGTGG 4186
Query 740 GTGGCGTCCTGGGCGATCTTCGTTCAGCGCCCCAGCGACCTCGGGTTCAGCGACGAAGGC 799
||| |||||| ||||| ||||| || ||||| || || || |||||| |||
Sbjct 4185 GTGAATAGCTGGGCCGCATTCGTCCAGCGGCCGAGCGATCTGGGTTTTTCCGACGAGGGC 4126
Query 800 TACGCGCTACCGGAACTGGACATCCGCTGGCACGAAGTACCGTCCGACCACTCGC-ACGC 858
|| | || || || |||||| | |||||||| || || || |||||||| | || |||
Sbjct 4125 TATGACCTGCCCGAGCTGGACGTGCGCTGGCATGAGGTGCCATCCGACCA-TAGCGCCGC 4067
Query 859 TGGCCATGAGCGTAATGGCCAGGGCCGCCTGCTTCGCAACACCGCCATTGGCGTGCAGGA 918
||| | || |||||||| | ||||| || ||| || ||| | ||
Sbjct 4066 CGGCGAGGACAAGGGCGGCCAGGGACTGCTGCTCAAGAAAGACGCGATCGGCATCGTCGA 4007
Query 919 CGCCGCCGCAGAGAAGCGCGAGAGCCTTCCTGCCAGGATCGCCAAACTGATGGAGATCCG 978
|| || || |||||||||||||| || | |||||||| ||||||| |||||
Sbjct 4006 TGCGTCCCGCGAAAAGCGCGAGAGCCTGGACGCGCGCATCGCCAAGATGATGGATATCCG 3947
Query 979 GGCCGAGGCTCCAGATGCTCACCGGATCATCTGGCATGACCTCGAGGCGGAACGCCACGC 1038
|| || | || || ||||| ||||||||||| || || ||| || ||| | ||
Sbjct 3946 AGCGGAAGACCCTACGGCACACCGTATCATCTGGCACGATCTTGAGCGCGAGCGCGAGGC 3887
Query 1039 GATCGAGGCCGCTATCCCCGACGCCGTCAGCGTCTACGGCGCCCAGGATCTGGAAGAGCG 1098
||||||| || | ||| | | || |||| |||| || || |||| |||||| |||||
Sbjct 3886 GATCGAGCGGGCCGTGCCCAATGTCGCCAGCATCTATGGTGCGCAGGGTCTGGACGAGCG 3827
Query 1099 CGA-ACGCGCGATTGTCCAGTTCAGCGACGGCGAGTTCCAGGAACTGGCTGCCAAGCCGG 1157
||| | ||| ||| || || |||||| | | ||||| ||||||||||||||||
Sbjct 3826 CGAGAAGCG-GATCATCGCCTTTTCCGACGGAAATGTGCAGGAGCTGGCTGCCAAGCCGG 3768
Query 1158 TGATCGCAGGCAGCGGCTGCAACTTCCAGCGCCACTGCTCGTGGGCCATCTACCTGGGCA 1217
|| | || ||| ||||||||| ||||||||||| ||| ||||| || | ||||||||
Sbjct 3767 TGCTGGCCGGCTCCGGCTGCAATTTCCAGCGCCATTGCCATTGGGCGATATTCCTGGGCA 3708
Query 1218 TCGGCTTCAAGTTCAACGACTTCATCCAGTCCATTCACCGCCTGCACCGATTCCTGCAGA 1277
|||| |||||||||||||||||||| ||| | || |||||| | || || || |||||||
Sbjct 3707 TCGGTTTCAAGTTCAACGACTTCATTCAGGCTATCCACCGCATCCAGCGGTTTCTGCAGA 3648
Query 1278 CCGGCCGCGTGCGCATCGACCTGATCTATACCGAGGCCGAGCGCGACATCCGCCGCCAAC 1337
| ||||| |||||||||||||||||| | |||||||| |||| | || || |
Sbjct 3647 CGCATCGCGTCCGCATCGACCTGATCTATTCGGAGGCCGAACGCGCGGTGCGGCGGTCGC 3588
Query 1338 TCGAACGGAAGTGGCAGCAGCACAACACCATGGTTCAGCGCATGACCGAGATCATCAAGC 1397
| ||| || ||| || |||||| | | || |||| |||| |||||||||| ||
Sbjct 3587 TGGAAGCCAAATGGGCGCGGCACAAGAAGACGGCCGAGCGGATGAGCGAGATCATC-CGC 3529
Query 1398 A-GTACGGCCTGTCCGTGGCCGCC------------ATGGCACAGACCCTCACCCGCTCC 1444
| || || ||| | | |||| | |||| | || ||||| ||
Sbjct 3528 ACCTATGGTCTGGGCCTTGCCGGCGCGCGCGACGTGCTGGCGCGAACGGTCACCACGGCC 3469
Query 1445 ATGGGCGTGGAGCGCGTCGAGATCAAGGGCAAGGACTACACCATCGTCAACAACGACACC 1504
|| ||||| ||| ||| |||| || || | | | ||| |||
Sbjct 3468 CCGGCGGTGGACTGCGCGGAG-----GGGC-CGGGCTGGAAGGTATGGGAAGGCGATACC 3415
Query 1505 GTGCTCGAAACCCGCCGCATGGAAAGCAACAGCGTCGGCTTGACCATCACCAGCATCCCC 1564
|| || | ||| ||| ||||| ||| |||||||||| ||| |||||||| | |||
Sbjct 3414 GTCATCCAGACCGGCCAGATGGAGAGCGGCAGCGTCGGCCTGATTGTCACCAGCGTGCCC 3355
Query 1565 TTCAGCACCCAGTACGAGTACTCGCCGAACTACGCCGACTTCGGCCACACCGACGACAAC 1624
|| ||||||| || || || ||||||| ||| || |||||||| |||||||| |
Sbjct 3354 TTTGGCACCCAATATGAATATTCGCCGAGCTATAATGATTTCGGCCATACCGACGATGCC 3295
Query 1625 GCGCACTTCTTCGAGCAGATGGACTATCTGATCCCGGAACTGCTGCGCGT-GACCATCC- 1682
| || ||||||| ||||||||||||||||| || || ||||||||||| || ||
Sbjct 3294 GACCATTTCTTCGCGCAGATGGACTATCTGACGCCCGAGCTGCTGCGCGTCTTGCAGCCG 3235
Query 1683 -CCGGGCGTCTGGC-CTGCATCCACGTGAAGGATCGCATCATTCCCGGCGGAATGACCGG 1740
| |||| ||||| ||||| |||||||||||| | |||| || ||||| ||
Sbjct 3234 GGCCGGCGCCTGGCGGTGCAT----GTGAAGGATCGCGTTGTTCCGTCGGGCATGACGGG 3179
Query 1741 CCTTGGCTTCCAGACCGTCTACCCCTTCCACATG-GAAGTGACTCGAGCCT--TCGTCAA 1797
|| ||||||| || || | || ||| |||| | || |||| | | ||| |
Sbjct 3178 TCTGGGCTTCCGCACGATCGAGCCGTTC--CATGCGCGCTGCATCGATCATTATCG-CCG 3122
Query 1798 GCATGGCTGGGCCTATATGGGCATGAAGACCATCGTCACCGACGTGGTTCGCGAGAACGC 1857
|||||||| |||||| |||||||| ||| ||||||||||| || ||||||||||| ||
Sbjct 3121 GCATGGCTTCGCCTATCTGGGCATGGTGACGATCGTCACCGATGTCGTTCGCGAGAATGC 3062
Query 1858 CCAGACCTACCGCCTTTCGTGGACGGAGCAGTGCAAGGACGGCACCAAGATGGGTGTCGG 1917
|| || || || ||||| |||||||||||||| | || | ||||| |||||
Sbjct 3061 GGGCACTTATCGGCTGGGCTGGACCGAGCAGTGCAAGGATGCCAGCGGCATGGGCGTCGG 3002
Query 1918 CATGCCCGAGTACTTGCTGATCTTCCGCAAGCCGCCCACCGACAACTCCAACGCCTACGG 1977
| ||||||| || |||| | |||||||||||||| |||||| ||||| ||| |
Sbjct 3001 CCTGCCCGAATATCTGCTACTGTTCCGCAAGCCGCCGACCGACCGGAGCAACGGCTATGC 2942
Query 1978 CGACGTGCCGGTGGTCAAGGCAAAGCCTCTG 2008
||| |||||||| ||||| ||||||| ||
Sbjct 2941 CGATGTGCCGGTCACCAAGGAAAAGCCTTTG 2911
Score = 104 bits (114), Expect = 7e-18
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 2275 GCTGCCCACCGGCTTCATGCTGCTTCCACCGCAGTCCTGGCACCCGGACGTATGGACCGA 2334
||||||||||| ||| |||| | || |||| |||||| || || || ||||||||
Sbjct 2599 GCTGCCCACCGATTTCGCGCTGATGCCGGTGCAGAGCTGGCATCCAGATGTCTGGACCGA 2540
Query 2335 CGTCGCCCGCATG-CGGACGCTCAACGCCCAGCAGTACAGCAAGGGCCAGGAAATGCACC 2393
||||| |||||| | ||| |||| | ||||| |||||||| || ||| |
Sbjct 2539 TGTCGCGCGCATGTATGGCGC-CAACACGATGCAGTCGGCCAAGGGCCGCGAGCAGCATC 2481
Query 2394 TGTGCCCGCTGCAGTTCGACATCGTCGACCGGGCCATCGTGCAGTACTCCATGGAAGGAG 2453
| ||||| |||| ||||| ||||||||||| |||||| | | | || || |
Sbjct 2480 TATGCCCCCTGCCCTTCGATATCGTCGACCGCGCCATCACGAACTGGAGCAACCCGGGCG 2421
Query 2454 ACCTGGTCTTCGATCCCTTCGGCGGGATCATGACCGTCCCGTACTGCGCGCTG 2506
||||| ||| ||||| |||||||| | ||||| || || ||||||||||
Sbjct 2420 ACCTGATCTATGATCCGTTCGGCGGCCTGATGACGGTGCC--CCTGCGCGCTG 2370
Score = 89.7 bits (98), Expect = 2e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 4446 CGAGCCGGTCAGCACCGTGACCACCAAGGACCGGCTGGCCCTGGTCACCGTGTGGATCAG 4505
|| |||| | || ||||||| || |||||||| | | |||||||| ||| |||||
Sbjct 10891 CGCGCCGCTGGGCGCCGTGACGACGAAGGACCGTTTCGGCCTGGTCATCGTTACGATCAA 10950
Query 4506 CGGCAGCCCCTACGTGATCGTCGACATCCGATTGCGGATGCTGAAACCGCGTGAGTTGTA 4565
|||| || | ||||||||| ||| | |||| ||||| | ||||| ||| |||
Sbjct 10951 CGGCGAGGATTATGCGATCGTCGATATCGGCATGCGAATGCTCAGCCCGCGCGAGCTGTT 11010
Query 4566 CCGCGCCCAGGGCTTCCCCGACAGCTACATCATCGAGCGGGGCCACAACGGGCAGCGGTT 4625
|| || ||||||||||| || ||||||||||| | | ||||| | | | |
Sbjct 11011 CCTGGCTCAGGGCTTCCCGCCCACATACATCATCGACCTGATGGTGAACGGCAAACCGCT 11070
Query 4626 CACTCTATCCCAGCAGGTCCACATGTGCGGCAACAGCGT 4664
|| | |||||||| |||||||| ||||||||
Sbjct 11071 GACCAAGACGGCGCAGGTCCGTATGTGCGGAAACAGCGT 11109
>seq7029
Length=148368
Score = 145 bits (160), Expect = 2e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTG 34046
|||||| || ||||| ||||||| | || || | | | | | || | ||||| ||
Sbjct 76791 GCCGTTACGCTGCTTGCCGATGATGACTTCGGCGATGTTGGGCTCCTTGCTGTCCTTGTT 76732
Query 34047 ATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGA 34106
||| || || ||||| | ||||||||| | |||||| ||||||||||| || || ||
Sbjct 76731 GTAGTAGTCATCGCGGTAGATGAACATGATGATGTCGGCATCCTGCTCGATGGCGCCCGA 76672
Query 34107 CTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAG 34166
||||||||||| |||||||| || ||||||| | |||||||||| || ||||||||
Sbjct 76671 TTCGCGCAGGTCGGACATCATGGGGCGCTTGTCGGTGCGCTGCTCCACCGAACGGTTGAG 76612
Query 34167 CTGCGACAGCACGATCA-CGGGGATACCAAGCTCCATGGCCAGTAGCTT 34214
||| ||||| | |||| |||| | ||| |||| ||||||| | |||
Sbjct 76611 CTGGGACAGGGCAATCACCGGGCACTGCAA-CTCCTTGGCCAGCATCTT 76564
>seq12437
Length=4626
Score = 120 bits (132), Expect = 1e-22
Identities = 113/144 (78%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 4522 ATCGTCGACATCCGATTGCGGATGCTGAAACCGCGTGAGTTGTACCGCGCCCAGGGCTTC 4581
|||||||||||| | |||| ||||| | ||||| ||||||||||||||||||||||||
Sbjct 2216 ATCGTCGACATCGGCCTGCGCATGCTCACGCCGCGCGAGTTGTACCGCGCCCAGGGCTTC 2275
Query 4582 CCCGACAGCTACATCATCGAGCGGGGCCACAACGGGCAGCGGTTCACTCTATCCCAGCAG 4641
||||||| |||| |||||||||| ||| ||| ||| | | || || |||
Sbjct 2276 CCCGACAACTACGTCATCGAGCGCGGCGCGCGCGGTGAGCCGATGACGAAGACCGCCCAG 2335
Query 4642 GTCCACATGTGCGGCAACAGCGTG 4665
|| | |||||||||||||||||||
Sbjct 2336 GTTCGCATGTGCGGCAACAGCGTG 2359
>seq12095
Length=15812
Score = 116 bits (128), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 33994 CGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGG---TGTCCGGGTGATAG 34050
|||||||| ||||||| | ||| |||| ||| || | | | | ||| || |||
Sbjct 1671 CGGTGCTTGCCGATGATGATCTCGGCCAGGCCCTTGTCCGGCGAATTTTCCTTGTTGTAG 1612
Query 34051 ACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCG 34110
||||| ||||| | ||| | ||||| ||| || ||||||||||| || || || |||
Sbjct 1611 TAATCGTCGCGGTAGATGAAGACGATCATGTCCGCATCCTGCTCGATTGCGCCCGATTCG 1552
Query 34111 CGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGC 34170
|| || || | ||| | ||| ||||||| | ||| ||||| |||||||||||||||
Sbjct 1551 CGAAGATCGGCCATTACCGGGCGCTTGTCGGTACGCGTTTCCAGCGAGCGGTTGAGCTGC 1492
Query 34171 GACAGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208
|| ||| ||||||| || | || ||| |||||||
Sbjct 1491 GAAAGCGCGATCACCGGCACGTGCAGTTCCTTGGCCAG 1454
>seq14232
Length=72504
Score = 107 bits (118), Expect = 6e-19
Identities = 116/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113
|| || ||| |||||||| || || ||| |||||||||||||||| || || |||||
Sbjct 61959 TCCTCGCGGAACACGAACCAGACCATGTCCGCGTCCTGCTCGATCGAGCCCGATTCGCGA 61900
Query 34114 AGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGAC 34173
||||| |||| | ||| ||||||| | || || |||| | ||| |||||||||||
Sbjct 61899 AGGTCGGACAGCTGCGGACGCTTGTCCTCGCGTTGTTCCACCGCACGGCTGAGCTGCGAC 61840
Query 34174 AGCACGATCACGGGGATACCAAGCTCCATGGCCA 34207
||| | | |||||||| | ||| ||| | ||||
Sbjct 61839 AGCGCCAGCACGGGGACATGAAGTTCCTTCGCCA 61806
>seq10221
Length=130382
Score = 93.3 bits (102), Expect = 1e-14
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 34057 TCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGCAGG 34116
|| || || |||||| || || |||||||||||||||||||| ||||| || ||||||
Sbjct 117757 TCGCGATAGACGAACCAGACCATGTCGGCGTCCTGCTCGATCGAGCCGGATTCACGCAGG 117816
Query 34117 TCCGACATCATCGGTCGCTTGTTCGGC-CGCTGCTCCAGGGAGCGGTTGAGCTGCGACAG 34175
|| || | | ||| |||||| ||| | |||||||| | || |||||||||||
Sbjct 117817 TCGGAAAGCTGCGGCCGCTTG-TCGTCGCGCTGCTCGACCTGACGCGACAGCTGCGACAG 117875
Query 34176 CACGATCACGGGGATACCAAGCTCCATGGCCAG 34208
|||| || |||| | |||||| |||||||
Sbjct 117876 GGCGATGACCGGGACGCTCAGCTCCTTGGCCAG 117908
>seq6988
Length=415921
Score = 91.5 bits (100), Expect = 5e-14
Identities = 113/153 (74%), Gaps = 4/153 (3%)
Strand=Plus/Plus
Query 34057 TCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGCAGG 34116
|| |||||||||||| || || |||||| ||||||||||||| || || || ||||||
Sbjct 345812 TCGCGGTACACGAACCAGACCATGTCGGCATCCTGCTCGATCGAGCCCGATTCCCGCAGG 345871
Query 34117 TCCGACATCATCGGTCGCTTGT--TCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGACA 34174
||||||| || ||||| | ||| |||| | | || ||| | ||||| ||||
Sbjct 345872 TCCGACAATTGGGGGCGCTTATCGTCGCGCGCTTCGACCTGGCGCGAT--AGCTGGGACA 345929
Query 34175 GCACGATCACGGGGATACCAAGCTCCATGGCCA 34207
| |||| || |||| | ||||||| ||||||
Sbjct 345930 GGGCGATGACCGGGACGCTAAGCTCCTTGGCCA 345962
>seq8050
Length=287393
Score = 87.8 bits (96), Expect = 6e-13
Identities = 103/137 (75%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113
|| || ||| ||||||||| | ||||||||||||||||||||| | ||||| || |||
Sbjct 96271 TCCTCACGGAACACGAACAGCACCACGTCGGCGTCCTGCTCGATGGAGCCGGATTCACGC 96330
Query 34114 AGGTCCGACATCATCGGTCGCTTGT-TCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGA 34172
||||| || | | ||| ||||||| | || ||| |||| | ||| |||||| ||
Sbjct 96331 AGGTCGGAAAGCTGCGGACGCTTGTCTTCGCGGCT-TTCCACCGCACGGGAGAGCTGTGA 96389
Query 34173 CAGCACGATCACGGGGA 34189
|||| |||| | ||||
Sbjct 96390 CAGCGCGATGATCGGGA 96406
>seq12839
Length=204338
Score = 86.0 bits (94), Expect = 2e-12
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 34044 GTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103
|| ||| ||||| || ||||| | ||||| || | ||||| ||||||||||| || ||
Sbjct 81754 GTTATAAACCTCATCACGGTAAATAAACATAATTAAATCGGCATCCTGCTCGATTGCACC 81813
Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTT 34163
|| || || | ||| ||||| | ||| || || || || || | ||||| || |||||
Sbjct 81814 TGATTCACGTAAGTCGGACATTACCGGACGTTTATTTGGACGGTTTTCCAGAGAACGGTT 81873
Query 34164 GAGCTGCGACAGCACGATCACGGGG 34188
||||| ||||| | || || |||
Sbjct 81874 AAGCTGTGACAGTGCAATAACAGGG 81898
>seq9425
Length=520298
Score = 80.6 bits (88), Expect = 9e-11
Identities = 74/94 (79%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 47990 ATCGGCTACAACCGCGCAGCCCGCATCATCGAGCGGATGGAGAAAGAAGGCGTAGTCACA 48049
||||||||||||||||| ||| |||||||||||||||||||| |||||| | |||
Sbjct 177988 ATCGGCTACAACCGCGCTGCCTCGATCATCGAGCGGATGGAGAAGGAAGGCATCGTCGGT 177929
Query 48050 GCGGCCGACAGCAACGGCGGCCGCGAGGTACTGG 48083
|||||| || | |||| |||||| | ||||
Sbjct 177928 GCGGCCAACCACGCCGGCAAGCGCGAGATTCTGG 177895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160435304924910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |