Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq12569 870 0.0 seq6089 702 0.0 seq7029 145 2e-30 seq12437 120 1e-22 seq12095 116 1e-21 seq14232 107 6e-19 seq10221 93.3 1e-14 seq6988 91.5 5e-14 seq8050 87.8 6e-13 seq12839 86.0 2e-12 seq9425 80.6 9e-11 >seq12569 Length=80069 Score = 870 bits (964), Expect = 0.0 Identities = 1381/1974 (70%), Gaps = 76/1974 (4%) Strand=Plus/Minus Query 40 CGCCTATGAAGACTTCTTGCGAGCCAAGGT----CCGTCTCGCCGAGCCGAAAGGCTTCG 95 ||||||| | |||||| || |||||||| ||| ||| ||| || |||||| Sbjct 64166 CGCCTATCACGACTTCCTGGCGGCCAAGGTGCCGCCGGCTCCCCGCTGCG----GCTTCG 64111 Query 96 AGGTGAAGCCATCGGCCT--TCCATCCCCTGCTCAAGCCGCACCAGCGAGCCATCGCCAC 153 || | |||| || || || |||| | |||||| || ||||| ||||| | | Sbjct 64110 AGATCGAGCC--CGACCGGGTCAATCCGATCCTCAAGGACCATCAGCGGGCCATGGTCTG 64053 Query 154 CTGGCTGGTGCGCCAAGGCCGCGCGGCCTGTTTCGCGGCCTTCGGCCTGGGCAAGTCGGT 213 |||| ||| || | ||||| || ||| ||||| |||||||||||||| || || Sbjct 64052 CTGGGCGGTCCGTCTCGGCCGGGCCGCCCTGTTCGCCGCCTTCGGCCTGGGGAAAAGCGT 63993 Query 214 AATGCAGCTTGAAGTGGTGCGCGTCACCCGCGACCTGGCCGGCGGCTACGCGCTCATCAC 273 | ||| | || | | ||| ||| ||||| | ||||||| | || ||| Sbjct 63992 CGTCCAGTTGGAGATTGCGCGGATCATGCGCGAGATCTCCGGCGGGATGGGCCTGATCGT 63933 Query 274 CATCCCGCTGGGTGTGCGCCAGGAGTTCTACCGAGACGCCGCGATGCTCGGCATCACCGT 333 ||||||||| || ||||| || |||||| || |||||||| ||||| ||| | ||| Sbjct 63932 CATCCCGCTCGGCGTGCGGCAAGAGTTCATGCGGGACGCCGCCATGCTGGGCGTTCGCGT 63873 Query 334 CCGGTTCATCCGAAGTTTCGACGAGGTAGACGACCCCACCACCATCTACCTGACCAATTA 393 ||||||||| || | |||| |||| ||||| ||| | ||||||||||||| || Sbjct 63872 CCGGTTCATTCGGCGGATCGAGGAGGCGGACGATCCCGGGGGCCTCTACCTGACCAACTA 63813 Query 394 CGAGACCGTCCGCGACGGCAAGCTCGACCCTCGCCGGTTCAGCGTGGCAAGCCTGGACGA 453 |||||| || || ||||||||||||||||| | | ||| || || |||||||||| Sbjct 63812 CGAGACGGTTCGGGACGGCAAGCTCGACCCATCCTGTTTCGCGGTCGCCTGCCTGGACGA 63753 Query 454 AGCCAGTTGCCTTCGCGGCTTCGGCGGCAGCAAGACGTTCCGCGAGTTCATGGCTCTGTT 513 ||||| || || |||||||||||| |||||| || |||||||||||| ||||| Sbjct 63752 GGCCAGCGTTCTGCGAGGCTTCGGCGGCTCCAAGACCTTTCGCGAGTTCATGCGCCTGTT 63693 Query 514 CGCTGGTGACGATCGCGCCGCCGGCATCCGCGGCGATGGCGTCCGGTACCGGTACGTGGC 573 || | | | |||| || || | ||| || Sbjct 63692 CG---------ACCAGGTCGCC------------------------TATCGCTTCGTCGC 63666 Query 574 CACTGCCACGCCAAGCCCGAACGAATACATCGAGCTACTGGCTTACTCGGCCTTCCTCGG 633 ||| |||||||| || ||||| | ||| ||||| || || || ||||| ||||| || Sbjct 63665 CACGGCCACGCCGTCGCCCAACGATTTCATAGAGCTGCTCGCCTATTCGGCGTTCCTGGG 63606 Query 634 CGTGATGGATGTCGGCCAGGCCAAGACCAGGTTCTTCAAACGCAACTCTGAGAAGGCCGA 693 ||||||||||||||| |||||||||||| |||| ||| || || ||| | ||||| Sbjct 63605 CGTGATGGATGTCGGGCAGGCCAAGACCCGGTTTTTCCGGCGAGACAGCGAGCACGCCGA 63546 Query 694 CCAACTCACCATCCATGCCCACAAAGAGGGCGAGTTCTGGATGTGGGTGGCGTCCTGGGC 753 | |||||| | || | ||||||||| ||||||||||| ||||| || ||||| Sbjct 63545 CGCCCTCACCCTGCACCCGCACAAAGAGCGCGAGTTCTGGCTGTGGTGCGCAAGCTGGGG 63486 Query 754 GATCTTCGTTCAGCGCCCCAGCGACCTCGGGTTCAGCGACGAAGGCTACGCGCTACCGGA 813 | ||||| ||||| || ||||| ||||| ||| |||||| ||||||| || ||| Sbjct 63485 TCTGTTCGTCCAGCGGCCGAGCGATCTCGGCTTCTCCGACGACGGCTACGACCTGCCGCC 63426 Query 814 ACTGGACATCCGCTGGCACGAAGTACCGTCCGACCACTCGCACGCTGGCCATGAGCGTAA 873 ||| | | || |||||||| ||| ||||| | ||| || || | Sbjct 63425 CCTGCAGGTGATCTATCACGAAGTGCCGGTGGACCATCGGGCCGCCGGAACCGACAAGAG 63366 Query 874 TGGCCAGGGCCGCCTGCTTCGCAACACCGCCATTGGCGTGCAGGACGCCGCCGCAGAG-- 931 |||||||||||||| | | || || | |||||| | ||| || | || Sbjct 63365 CGGCCAGGGCCGCCTATTCCAGGACGATGCGGTCGGCGTG---GTCGCGGCGTCCAAGGT 63309 Query 932 -AAGCGCGAGAGCCTTCCTGCCAGGATCGCCAAACTGATGGAGATCCGGGCCGAGGCTCC 990 |||||||| | ||| ||| | ||| || || ||||||| || | | || Sbjct 63308 CAAGCGCGACACCCTGGAGGCCCGCATCCGGAAGATGCGCGAGATCCTCGCGGCCGACCC 63249 Query 991 AGATGCTCACCGGATCATCTGGCATGACCTCGAGGCGGAACGCCACGCGATCGAGGCCGC 1050 || | | | ||| | ||||| || || ||||| || || ||||||||| ||| Sbjct 63248 CGAGGGGCGCTACATCCTGTGGCACGATCTGGAGGCCGAGCGGGCGGCGATCGAGCTCGC 63189 Query 1051 TATCCCCGACGCCGTCAGCGTCTACGGCGCCCAGGATCTGGAAGAGCGCGAACGCGCGAT 1110 | || ||| ||||||||| | |||| |||||||||| || | |||||||| ||||| Sbjct 63188 CCTGCCGAACGTCGTCAGCGTGTTCGGCTCCCAGGATCTTGAGGCGCGCGAACAGGCGAT 63129 Query 1111 TGTCCAGTTCAGCGACGGCGAGTTCCAGGAACTGGCTGCCAAGCCGGTGATCGCAGGCAG 1170 |||| ||||||||||||| ||| | | || || ||||||||||||||||| ||| Sbjct 63128 CGTCCTGTTCAGCGACGGCTGGTTTCCCTATCTCGCGGCCAAGCCGGTGATCGCCGGCTC 63069 Query 1171 CGGCTGCAACTTCCAGCGCCACTGCTCGTGGGCCATCTACCTGGGCATCGGCTTCAAGTT 1230 |||||||||||||||||||| ||| ||| ||| |||||| ||||||||||| || Sbjct 63068 AGGCTGCAACTTCCAGCGCCATTGCCACAAGGCGGTCTTCCTGGGGATCGGCTTCAAATT 63009 Query 1231 CAACGACTTCATCCAGTCCATTCACCGCCTGCACCGATTCCTGCAGACCGGC--CGCGTG 1288 |||||||||||||||| | || |||||| | || |||||||||||| ||| | ||| Sbjct 63008 CAACGACTTCATCCAGGCGATCCACCGCATCCAGCGATTCCTGCAG--GGGCATCCCGTC 62951 Query 1289 CGCATCGACCTGATCTATACCGAGGCCGAGCGCGACATCCGCCG---CCAACTCGAACGG 1345 ||| || ||||||| ||||| |||||||| | | | || || || || | Sbjct 62950 GAGATCCACGTGATCTACGCCGAGAGCGAGCGCGCCGTGCTGCGGACCCTGCTGGA---G 62894 Query 1346 AAGTGGCAGCAGCACAACACCATGGTTCAGCGCATGACCGAGATCATCAAGCAGTACGGC 1405 |||||| ||||||| | |||| || ||||| || ||||||| | |||||| Sbjct 62893 AAGTGGGCGCAGCACGAGGAAATGGCGAAGACCATGAGCGCGATCATCCGCGAATACGGC 62834 Query 1406 CTGTCCGTGGCCGCCATGGCACAGACCCTCACCCGCTCCATGGGCGT---GGAGCGCGTC 1462 |||||| |||| |||||| || ||||||||| |||||||||| ||| || || Sbjct 62833 CTGTCCAACGCCGACATGGCGAAGGTGCTCACCCGCGCCATGGGCGTGAAGGATCGGATC 62774 Query 1463 GAGATCAAGGGCAAGGACTACACCATCGTCAACAACGACACCGTGCTCGAAACCCGCCGC 1522 ||| | | ||| | |||| | | || ||| | |||||||| ||||||| || || Sbjct 62773 GAGGTGACCGGCGACAACTATCGCTTGGTGAACGAAGACACCGTCGTCGAAACGCGACGG 62714 Query 1523 ATGGAAAGCAACAGCGTCGGCTTGACCATCACCAGCATCCCCTTCAGCACCCAGTACGAG 1582 ||| ||||||| ||| ||| | ||||| ||||| ||| || ||||||||| Sbjct 62713 ATGCCGGCGGACAGCGTGGGCCTGATCGTCACCTCGATCCCGTTCTCGACGCAGTACGAG 62654 Query 1583 TACTCGCCGAACTACGCCGACTTCGGCCACACCGACGACAACGCGCACTTCT-TCGAGCA 1641 || ||||||||||||||||| ||||| ||||||||||||||||| || |||| ||| || Sbjct 62653 TATTCGCCGAACTACGCCGATTTCGGACACACCGACGACAACGCCCATTTCTGGCGA-CA 62595 Query 1642 GATGGACTATCTGATCCCGGAACTGCTGCGCGTGACCATCCCCGGGCGTCTGGCCTGCAT 1701 |||||||| ||| |||||| |||||||||||| | || || || ||||| ||| Sbjct 62594 GATGGACTTTCTCGCCCCGGAGCTGCTGCGCGTGCTCGCGCCGGGCCGGGTGGCCGCCAT 62535 Query 1702 CCACGTGAAGGATCGCATCATTCCCGGCGGAATGACCGGCCTTGGCTTCCAGACCGTCTA 1761 |||||||||||| || ||| | || || || ||||||||||| ||||| ||||||||||| Sbjct 62534 CCACGTGAAGGACCGGATCGTGCCAGGGGGTATGACCGGCCTCGGCTTTCAGACCGTCTA 62475 Query 1762 CCCCTTCCACATGGAAGTGACT--CGAGC---CTTCGTCAAGCATGGCTGGGCCTATATG 1816 ||| || | ||| |||| || || |||| |||| |||| ||||| | Sbjct 62474 CCCGTT---CGCGGA--CGACTGCCGGGCGTGCTTCCGCAAGGCCGGCTTCGCCTACCTC 62420 Query 1817 GGCATGAAGACCATCGTCACCGACGTGGTTCGCGAGAACGCCCAGACCTACCGCCTTTCG 1876 ||| ||||||| | | |||||||| || ||||||||| ||||||||| || || Sbjct 62419 GGCGAAAAGACCAACCTGACCGACGTCGTCCGCGAGAACAACCAGACCTATCGGCTGGGC 62360 Query 1877 TGGACGGAGCAGTGCAAGGACGGCACCAAGATGGGTGTCGGCATGCCCGAGTACTTGCTG 1936 |||| ||||||||||||||||| | ||||| | ||| |||| || | ||||| Sbjct 62359 TGGAGCGAGCAGTGCAAGGACGGATCGCGCATGGGCGCGGGCCTGCCGGAAAAGGTGCTG 62300 Query 1937 ATCTTCCGCAAGCCGCCCACCGACAACTCCAACGCCTACGGCGACGTGCCGGTG 1990 | ||||||||||||||| ||||| ||||||| |||| |||| ||||||| Sbjct 62299 CTGTTCCGCAAGCCGCCCTCCGACCTGTCCAACGGTTACGCCGACCGGCCGGTG 62246 Score = 190 bits (210), Expect = 7e-44 Identities = 250/344 (73%), Gaps = 2/344 (1%) Strand=Plus/Minus Query 2222 TACGACTTCGAGCACCACGTCCGCATCGGCGAATCGCTGGAGGTCACCGGGAAGCTGCCC 2281 ||||||||||||||||||||| | |||||| ||||||| | | || || |||| Sbjct 62083 TACGACTTCGAGCACCACGTCAAGGTGGGCGAAGCGCTGGACGCAAAAGGCAAATTGCCG 62024 Query 2282 ACCGGCTTCATGCTGCTTCCACCGCAGTCCTGGCACCCGGACGTATGGACCGACGTCGCC 2341 | ||||||| |||| || ||||| |||||| ||||| |||||||| |||||| Sbjct 62023 CCGACCTTCATGTTGCTGCCGCCGCACAGTTGGCACGACGACGTCTGGACCGATGTCGCC 61964 Query 2342 CGCATGCGGACGCTCAACGCCCAGCAGTAC-AGCAAGGGCCAGGAAATGCACCTGTGCCC 2400 | |||| | |||||||| || ||| | |||| |||| ||||| |||||||||||| Sbjct 61963 CAGATGCTGTCGCTCAACACCGTCCAGGCCCAGCA-GGGCGCGGAAAAGCACCTGTGCCC 61905 Query 2401 GCTGCAGTTCGACATCGTCGACCGGGCCATCGTGCAGTACTCCATGGAAGGAGACCTGGT 2460 |||| ||||| |||||||||||| ||| | |||| ||| | || ||| |||| Sbjct 61904 CCTGCCCTTCGATATCGTCGACCGGCTGATCATCCAGTGTTCCGAGCCGGGCGACGTGGT 61845 Query 2461 CTTCGATCCCTTCGGCGGGATCATGACCGTCCCGTACTGCGCGCTGAAGCTCAAGCGCAG 2520 |||||||| |||||||| | |||||||| || || |||| | |||| | |||| Sbjct 61844 GTTCGATCCGTTCGGCGGCCTGATGACCGTGCCCTATCGCGCCATCAAGCACGGGCGCGT 61785 Query 2521 AGCCCGCGCCCACGAACTGAACTCCCGCTACTTCCTGGACGGTG 2564 | | | || |||| |||||| | |||||| || ||||||| Sbjct 61784 CGGCTGGGCGAACGAGCTGAACCCGGCCTACTTTCTCGACGGTG 61741 >seq6089 Length=13452 Score = 702 bits (778), Expect = 0.0 Identities = 1153/1651 (70%), Gaps = 71/1651 (4%) Strand=Plus/Minus Query 380 TACCTGACCAATTACGAGACCGTCCGCGACGGCAAGCTCGACCCTCGCCGGTTCAGCGTG 439 ||||||||||| || || | |||||||| |||||| |||||| | |||| | Sbjct 4512 TACCTGACCAACTATGAATCTGTCCGCGAAGGCAAGATCGACCTGACGCATTTCAATGCC 4453 Query 440 GCAAGCCTGGACGAAGCCAGTTGCCTTCGCGGCTTCGGCGGCAGCAAGACGTTCCGCGAG 499 || ||||||||||| ||||| ||||| || ||||||| |||||| ||||||||| Sbjct 4452 GCGTCGCTGGACGAAGCATCGTGCCTGCGCGGTTTTGGCGGCACCAAGACCTTCCGCGAG 4393 Query 500 TTCATGGCTCTGTTCGCTGGTGACGATCGCGCCGCCGGCATCCGCGGCGATGGCGTCCGG 559 |||||| ||||||| |||||| || || Sbjct 4392 TTCATGCGGCTGTTCGA------------------CGGCAT-----GCAATA-------- 4364 Query 560 TACCGGTACGTGGCCACTGCCACGCCAAGCCCGAACGAATACATCGAGCTACTGGCTTAC 619 || || || ||||| |||||||| |||||||| || |||||||| ||||| || Sbjct 4363 TAA--GTTTGTCGCCACGGCCACGCCGTCGCCGAACGACTATATCGAGCTGCTGGCCTAT 4306 Query 620 TCGGCCTTCCTCGGCGTGATGGATGTCGGCCAGGCCAAGACCAGGTTCTTCAAACGCAAC 679 | |||||||| | | |||||||||||||||||||||||| |||||||||| || ||| Sbjct 4305 GCCGCCTTCCTGGAGATCATGGATGTCGGCCAGGCCAAGACCCGGTTCTTCAAGCGGAAC 4246 Query 680 TCTGAGAAGGCCGACCAACTCACCATCCATGCCCACAAAGAGGGCGAGTTCTGGATGTGG 739 |||||||||||| |||| ||||||||| | ||||| || | || |||||| ||||| Sbjct 4245 AGCGAGAAGGCCGACGAACTGACCATCCATCCGCACAAGGAAGAGGAATTCTGGCTGTGG 4186 Query 740 GTGGCGTCCTGGGCGATCTTCGTTCAGCGCCCCAGCGACCTCGGGTTCAGCGACGAAGGC 799 ||| |||||| ||||| ||||| || ||||| || || || |||||| ||| Sbjct 4185 GTGAATAGCTGGGCCGCATTCGTCCAGCGGCCGAGCGATCTGGGTTTTTCCGACGAGGGC 4126 Query 800 TACGCGCTACCGGAACTGGACATCCGCTGGCACGAAGTACCGTCCGACCACTCGC-ACGC 858 || | || || || |||||| | |||||||| || || || |||||||| | || ||| Sbjct 4125 TATGACCTGCCCGAGCTGGACGTGCGCTGGCATGAGGTGCCATCCGACCA-TAGCGCCGC 4067 Query 859 TGGCCATGAGCGTAATGGCCAGGGCCGCCTGCTTCGCAACACCGCCATTGGCGTGCAGGA 918 ||| | || |||||||| | ||||| || ||| || ||| | || Sbjct 4066 CGGCGAGGACAAGGGCGGCCAGGGACTGCTGCTCAAGAAAGACGCGATCGGCATCGTCGA 4007 Query 919 CGCCGCCGCAGAGAAGCGCGAGAGCCTTCCTGCCAGGATCGCCAAACTGATGGAGATCCG 978 || || || |||||||||||||| || | |||||||| ||||||| ||||| Sbjct 4006 TGCGTCCCGCGAAAAGCGCGAGAGCCTGGACGCGCGCATCGCCAAGATGATGGATATCCG 3947 Query 979 GGCCGAGGCTCCAGATGCTCACCGGATCATCTGGCATGACCTCGAGGCGGAACGCCACGC 1038 || || | || || ||||| ||||||||||| || || ||| || ||| | || Sbjct 3946 AGCGGAAGACCCTACGGCACACCGTATCATCTGGCACGATCTTGAGCGCGAGCGCGAGGC 3887 Query 1039 GATCGAGGCCGCTATCCCCGACGCCGTCAGCGTCTACGGCGCCCAGGATCTGGAAGAGCG 1098 ||||||| || | ||| | | || |||| |||| || || |||| |||||| ||||| Sbjct 3886 GATCGAGCGGGCCGTGCCCAATGTCGCCAGCATCTATGGTGCGCAGGGTCTGGACGAGCG 3827 Query 1099 CGA-ACGCGCGATTGTCCAGTTCAGCGACGGCGAGTTCCAGGAACTGGCTGCCAAGCCGG 1157 ||| | ||| ||| || || |||||| | | ||||| |||||||||||||||| Sbjct 3826 CGAGAAGCG-GATCATCGCCTTTTCCGACGGAAATGTGCAGGAGCTGGCTGCCAAGCCGG 3768 Query 1158 TGATCGCAGGCAGCGGCTGCAACTTCCAGCGCCACTGCTCGTGGGCCATCTACCTGGGCA 1217 || | || ||| ||||||||| ||||||||||| ||| ||||| || | |||||||| Sbjct 3767 TGCTGGCCGGCTCCGGCTGCAATTTCCAGCGCCATTGCCATTGGGCGATATTCCTGGGCA 3708 Query 1218 TCGGCTTCAAGTTCAACGACTTCATCCAGTCCATTCACCGCCTGCACCGATTCCTGCAGA 1277 |||| |||||||||||||||||||| ||| | || |||||| | || || || ||||||| Sbjct 3707 TCGGTTTCAAGTTCAACGACTTCATTCAGGCTATCCACCGCATCCAGCGGTTTCTGCAGA 3648 Query 1278 CCGGCCGCGTGCGCATCGACCTGATCTATACCGAGGCCGAGCGCGACATCCGCCGCCAAC 1337 | ||||| |||||||||||||||||| | |||||||| |||| | || || | Sbjct 3647 CGCATCGCGTCCGCATCGACCTGATCTATTCGGAGGCCGAACGCGCGGTGCGGCGGTCGC 3588 Query 1338 TCGAACGGAAGTGGCAGCAGCACAACACCATGGTTCAGCGCATGACCGAGATCATCAAGC 1397 | ||| || ||| || |||||| | | || |||| |||| |||||||||| || Sbjct 3587 TGGAAGCCAAATGGGCGCGGCACAAGAAGACGGCCGAGCGGATGAGCGAGATCATC-CGC 3529 Query 1398 A-GTACGGCCTGTCCGTGGCCGCC------------ATGGCACAGACCCTCACCCGCTCC 1444 | || || ||| | | |||| | |||| | || ||||| || Sbjct 3528 ACCTATGGTCTGGGCCTTGCCGGCGCGCGCGACGTGCTGGCGCGAACGGTCACCACGGCC 3469 Query 1445 ATGGGCGTGGAGCGCGTCGAGATCAAGGGCAAGGACTACACCATCGTCAACAACGACACC 1504 || ||||| ||| ||| |||| || || | | | ||| ||| Sbjct 3468 CCGGCGGTGGACTGCGCGGAG-----GGGC-CGGGCTGGAAGGTATGGGAAGGCGATACC 3415 Query 1505 GTGCTCGAAACCCGCCGCATGGAAAGCAACAGCGTCGGCTTGACCATCACCAGCATCCCC 1564 || || | ||| ||| ||||| ||| |||||||||| ||| |||||||| | ||| Sbjct 3414 GTCATCCAGACCGGCCAGATGGAGAGCGGCAGCGTCGGCCTGATTGTCACCAGCGTGCCC 3355 Query 1565 TTCAGCACCCAGTACGAGTACTCGCCGAACTACGCCGACTTCGGCCACACCGACGACAAC 1624 || ||||||| || || || ||||||| ||| || |||||||| |||||||| | Sbjct 3354 TTTGGCACCCAATATGAATATTCGCCGAGCTATAATGATTTCGGCCATACCGACGATGCC 3295 Query 1625 GCGCACTTCTTCGAGCAGATGGACTATCTGATCCCGGAACTGCTGCGCGT-GACCATCC- 1682 | || ||||||| ||||||||||||||||| || || ||||||||||| || || Sbjct 3294 GACCATTTCTTCGCGCAGATGGACTATCTGACGCCCGAGCTGCTGCGCGTCTTGCAGCCG 3235 Query 1683 -CCGGGCGTCTGGC-CTGCATCCACGTGAAGGATCGCATCATTCCCGGCGGAATGACCGG 1740 | |||| ||||| ||||| |||||||||||| | |||| || ||||| || Sbjct 3234 GGCCGGCGCCTGGCGGTGCAT----GTGAAGGATCGCGTTGTTCCGTCGGGCATGACGGG 3179 Query 1741 CCTTGGCTTCCAGACCGTCTACCCCTTCCACATG-GAAGTGACTCGAGCCT--TCGTCAA 1797 || ||||||| || || | || ||| |||| | || |||| | | ||| | Sbjct 3178 TCTGGGCTTCCGCACGATCGAGCCGTTC--CATGCGCGCTGCATCGATCATTATCG-CCG 3122 Query 1798 GCATGGCTGGGCCTATATGGGCATGAAGACCATCGTCACCGACGTGGTTCGCGAGAACGC 1857 |||||||| |||||| |||||||| ||| ||||||||||| || ||||||||||| || Sbjct 3121 GCATGGCTTCGCCTATCTGGGCATGGTGACGATCGTCACCGATGTCGTTCGCGAGAATGC 3062 Query 1858 CCAGACCTACCGCCTTTCGTGGACGGAGCAGTGCAAGGACGGCACCAAGATGGGTGTCGG 1917 || || || || ||||| |||||||||||||| | || | ||||| ||||| Sbjct 3061 GGGCACTTATCGGCTGGGCTGGACCGAGCAGTGCAAGGATGCCAGCGGCATGGGCGTCGG 3002 Query 1918 CATGCCCGAGTACTTGCTGATCTTCCGCAAGCCGCCCACCGACAACTCCAACGCCTACGG 1977 | ||||||| || |||| | |||||||||||||| |||||| ||||| ||| | Sbjct 3001 CCTGCCCGAATATCTGCTACTGTTCCGCAAGCCGCCGACCGACCGGAGCAACGGCTATGC 2942 Query 1978 CGACGTGCCGGTGGTCAAGGCAAAGCCTCTG 2008 ||| |||||||| ||||| ||||||| || Sbjct 2941 CGATGTGCCGGTCACCAAGGAAAAGCCTTTG 2911 Score = 104 bits (114), Expect = 7e-18 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 2275 GCTGCCCACCGGCTTCATGCTGCTTCCACCGCAGTCCTGGCACCCGGACGTATGGACCGA 2334 ||||||||||| ||| |||| | || |||| |||||| || || || |||||||| Sbjct 2599 GCTGCCCACCGATTTCGCGCTGATGCCGGTGCAGAGCTGGCATCCAGATGTCTGGACCGA 2540 Query 2335 CGTCGCCCGCATG-CGGACGCTCAACGCCCAGCAGTACAGCAAGGGCCAGGAAATGCACC 2393 ||||| |||||| | ||| |||| | ||||| |||||||| || ||| | Sbjct 2539 TGTCGCGCGCATGTATGGCGC-CAACACGATGCAGTCGGCCAAGGGCCGCGAGCAGCATC 2481 Query 2394 TGTGCCCGCTGCAGTTCGACATCGTCGACCGGGCCATCGTGCAGTACTCCATGGAAGGAG 2453 | ||||| |||| ||||| ||||||||||| |||||| | | | || || | Sbjct 2480 TATGCCCCCTGCCCTTCGATATCGTCGACCGCGCCATCACGAACTGGAGCAACCCGGGCG 2421 Query 2454 ACCTGGTCTTCGATCCCTTCGGCGGGATCATGACCGTCCCGTACTGCGCGCTG 2506 ||||| ||| ||||| |||||||| | ||||| || || |||||||||| Sbjct 2420 ACCTGATCTATGATCCGTTCGGCGGCCTGATGACGGTGCC--CCTGCGCGCTG 2370 Score = 89.7 bits (98), Expect = 2e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 4446 CGAGCCGGTCAGCACCGTGACCACCAAGGACCGGCTGGCCCTGGTCACCGTGTGGATCAG 4505 || |||| | || ||||||| || |||||||| | | |||||||| ||| ||||| Sbjct 10891 CGCGCCGCTGGGCGCCGTGACGACGAAGGACCGTTTCGGCCTGGTCATCGTTACGATCAA 10950 Query 4506 CGGCAGCCCCTACGTGATCGTCGACATCCGATTGCGGATGCTGAAACCGCGTGAGTTGTA 4565 |||| || | ||||||||| ||| | |||| ||||| | ||||| ||| ||| Sbjct 10951 CGGCGAGGATTATGCGATCGTCGATATCGGCATGCGAATGCTCAGCCCGCGCGAGCTGTT 11010 Query 4566 CCGCGCCCAGGGCTTCCCCGACAGCTACATCATCGAGCGGGGCCACAACGGGCAGCGGTT 4625 || || ||||||||||| || ||||||||||| | | ||||| | | | | Sbjct 11011 CCTGGCTCAGGGCTTCCCGCCCACATACATCATCGACCTGATGGTGAACGGCAAACCGCT 11070 Query 4626 CACTCTATCCCAGCAGGTCCACATGTGCGGCAACAGCGT 4664 || | |||||||| |||||||| |||||||| Sbjct 11071 GACCAAGACGGCGCAGGTCCGTATGTGCGGAAACAGCGT 11109 >seq7029 Length=148368 Score = 145 bits (160), Expect = 2e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTG 34046 |||||| || ||||| ||||||| | || || | | | | | || | ||||| || Sbjct 76791 GCCGTTACGCTGCTTGCCGATGATGACTTCGGCGATGTTGGGCTCCTTGCTGTCCTTGTT 76732 Query 34047 ATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGA 34106 ||| || || ||||| | ||||||||| | |||||| ||||||||||| || || || Sbjct 76731 GTAGTAGTCATCGCGGTAGATGAACATGATGATGTCGGCATCCTGCTCGATGGCGCCCGA 76672 Query 34107 CTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAG 34166 ||||||||||| |||||||| || ||||||| | |||||||||| || |||||||| Sbjct 76671 TTCGCGCAGGTCGGACATCATGGGGCGCTTGTCGGTGCGCTGCTCCACCGAACGGTTGAG 76612 Query 34167 CTGCGACAGCACGATCA-CGGGGATACCAAGCTCCATGGCCAGTAGCTT 34214 ||| ||||| | |||| |||| | ||| |||| ||||||| | ||| Sbjct 76611 CTGGGACAGGGCAATCACCGGGCACTGCAA-CTCCTTGGCCAGCATCTT 76564 >seq12437 Length=4626 Score = 120 bits (132), Expect = 1e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 4522 ATCGTCGACATCCGATTGCGGATGCTGAAACCGCGTGAGTTGTACCGCGCCCAGGGCTTC 4581 |||||||||||| | |||| ||||| | ||||| |||||||||||||||||||||||| Sbjct 2216 ATCGTCGACATCGGCCTGCGCATGCTCACGCCGCGCGAGTTGTACCGCGCCCAGGGCTTC 2275 Query 4582 CCCGACAGCTACATCATCGAGCGGGGCCACAACGGGCAGCGGTTCACTCTATCCCAGCAG 4641 ||||||| |||| |||||||||| ||| ||| ||| | | || || ||| Sbjct 2276 CCCGACAACTACGTCATCGAGCGCGGCGCGCGCGGTGAGCCGATGACGAAGACCGCCCAG 2335 Query 4642 GTCCACATGTGCGGCAACAGCGTG 4665 || | ||||||||||||||||||| Sbjct 2336 GTTCGCATGTGCGGCAACAGCGTG 2359 >seq12095 Length=15812 Score = 116 bits (128), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 33994 CGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGG---TGTCCGGGTGATAG 34050 |||||||| ||||||| | ||| |||| ||| || | | | | ||| || ||| Sbjct 1671 CGGTGCTTGCCGATGATGATCTCGGCCAGGCCCTTGTCCGGCGAATTTTCCTTGTTGTAG 1612 Query 34051 ACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCG 34110 ||||| ||||| | ||| | ||||| ||| || ||||||||||| || || || ||| Sbjct 1611 TAATCGTCGCGGTAGATGAAGACGATCATGTCCGCATCCTGCTCGATTGCGCCCGATTCG 1552 Query 34111 CGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGC 34170 || || || | ||| | ||| ||||||| | ||| ||||| ||||||||||||||| Sbjct 1551 CGAAGATCGGCCATTACCGGGCGCTTGTCGGTACGCGTTTCCAGCGAGCGGTTGAGCTGC 1492 Query 34171 GACAGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208 || ||| ||||||| || | || ||| ||||||| Sbjct 1491 GAAAGCGCGATCACCGGCACGTGCAGTTCCTTGGCCAG 1454 >seq14232 Length=72504 Score = 107 bits (118), Expect = 6e-19 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113 || || ||| |||||||| || || ||| |||||||||||||||| || || ||||| Sbjct 61959 TCCTCGCGGAACACGAACCAGACCATGTCCGCGTCCTGCTCGATCGAGCCCGATTCGCGA 61900 Query 34114 AGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGAC 34173 ||||| |||| | ||| ||||||| | || || |||| | ||| ||||||||||| Sbjct 61899 AGGTCGGACAGCTGCGGACGCTTGTCCTCGCGTTGTTCCACCGCACGGCTGAGCTGCGAC 61840 Query 34174 AGCACGATCACGGGGATACCAAGCTCCATGGCCA 34207 ||| | | |||||||| | ||| ||| | |||| Sbjct 61839 AGCGCCAGCACGGGGACATGAAGTTCCTTCGCCA 61806 >seq10221 Length=130382 Score = 93.3 bits (102), Expect = 1e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 34057 TCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGCAGG 34116 || || || |||||| || || |||||||||||||||||||| ||||| || |||||| Sbjct 117757 TCGCGATAGACGAACCAGACCATGTCGGCGTCCTGCTCGATCGAGCCGGATTCACGCAGG 117816 Query 34117 TCCGACATCATCGGTCGCTTGTTCGGC-CGCTGCTCCAGGGAGCGGTTGAGCTGCGACAG 34175 || || | | ||| |||||| ||| | |||||||| | || ||||||||||| Sbjct 117817 TCGGAAAGCTGCGGCCGCTTG-TCGTCGCGCTGCTCGACCTGACGCGACAGCTGCGACAG 117875 Query 34176 CACGATCACGGGGATACCAAGCTCCATGGCCAG 34208 |||| || |||| | |||||| ||||||| Sbjct 117876 GGCGATGACCGGGACGCTCAGCTCCTTGGCCAG 117908 >seq6988 Length=415921 Score = 91.5 bits (100), Expect = 5e-14 Identities = 113/153 (74%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 34057 TCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGCAGG 34116 || |||||||||||| || || |||||| ||||||||||||| || || || |||||| Sbjct 345812 TCGCGGTACACGAACCAGACCATGTCGGCATCCTGCTCGATCGAGCCCGATTCCCGCAGG 345871 Query 34117 TCCGACATCATCGGTCGCTTGT--TCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGACA 34174 ||||||| || ||||| | ||| |||| | | || ||| | ||||| |||| Sbjct 345872 TCCGACAATTGGGGGCGCTTATCGTCGCGCGCTTCGACCTGGCGCGAT--AGCTGGGACA 345929 Query 34175 GCACGATCACGGGGATACCAAGCTCCATGGCCA 34207 | |||| || |||| | ||||||| |||||| Sbjct 345930 GGGCGATGACCGGGACGCTAAGCTCCTTGGCCA 345962 >seq8050 Length=287393 Score = 87.8 bits (96), Expect = 6e-13 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113 || || ||| ||||||||| | ||||||||||||||||||||| | ||||| || ||| Sbjct 96271 TCCTCACGGAACACGAACAGCACCACGTCGGCGTCCTGCTCGATGGAGCCGGATTCACGC 96330 Query 34114 AGGTCCGACATCATCGGTCGCTTGT-TCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGA 34172 ||||| || | | ||| ||||||| | || ||| |||| | ||| |||||| || Sbjct 96331 AGGTCGGAAAGCTGCGGACGCTTGTCTTCGCGGCT-TTCCACCGCACGGGAGAGCTGTGA 96389 Query 34173 CAGCACGATCACGGGGA 34189 |||| |||| | |||| Sbjct 96390 CAGCGCGATGATCGGGA 96406 >seq12839 Length=204338 Score = 86.0 bits (94), Expect = 2e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 34044 GTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103 || ||| ||||| || ||||| | ||||| || | ||||| ||||||||||| || || Sbjct 81754 GTTATAAACCTCATCACGGTAAATAAACATAATTAAATCGGCATCCTGCTCGATTGCACC 81813 Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTT 34163 || || || | ||| ||||| | ||| || || || || || | ||||| || ||||| Sbjct 81814 TGATTCACGTAAGTCGGACATTACCGGACGTTTATTTGGACGGTTTTCCAGAGAACGGTT 81873 Query 34164 GAGCTGCGACAGCACGATCACGGGG 34188 ||||| ||||| | || || ||| Sbjct 81874 AAGCTGTGACAGTGCAATAACAGGG 81898 >seq9425 Length=520298 Score = 80.6 bits (88), Expect = 9e-11 Identities = 74/94 (79%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 47990 ATCGGCTACAACCGCGCAGCCCGCATCATCGAGCGGATGGAGAAAGAAGGCGTAGTCACA 48049 ||||||||||||||||| ||| |||||||||||||||||||| |||||| | ||| Sbjct 177988 ATCGGCTACAACCGCGCTGCCTCGATCATCGAGCGGATGGAGAAGGAAGGCATCGTCGGT 177929 Query 48050 GCGGCCGACAGCAACGGCGGCCGCGAGGTACTGG 48083 |||||| || | |||| |||||| | |||| Sbjct 177928 GCGGCCAACCACGCCGGCAAGCGCGAGATTCTGG 177895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160435304924910