Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_030946.1 Length=33477 Score E Sequences producing significant alignments: (Bits) Value seq8939 86.0 1e-12 >seq8939 Length=223461 Score = 86.0 bits (94), Expect = 1e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24107 ATTTCAAAGAACAAAGTTCCTCGTGTATCTTCAAAACCTCGTCTGTTTCCTGCAATTGAG 24166 || |||||||||| ||||||||| ||||||| |||||| |||| |||||||| ||| Sbjct 25332 ATCTCAAAGAACATAGTTCCTCGAGTATCTTGGAAACCTTGTCTTTTTCCTGCCTGCGAG 25391 Query 24167 AAAGCTTGGCACGGAAATCCTCCACAGATAATGTC 24201 |||||||| || ||||| || || | | |||||| Sbjct 25392 AAAGCTTGACATGGAAAACCGCCTAACAGAATGTC 25426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106985664799762