Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_031052.1 Length=57804 Score E Sequences producing significant alignments: (Bits) Value seq11405 114 5e-21 >seq11405 Length=110570 Score = 114 bits (126), Expect = 5e-21 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 44775 GGGACTCGACTGGGTGATCGTCGGCGGCGAATCCGGCCGGGGCGCGCGACCGATGCACCC 44834 || ||| ||||||||||||||||||||||| ||||| || ||||| || ||||| || Sbjct 75398 GGAACTGGACTGGGTGATCGTCGGCGGCGAGAGCGGCCCCGGTGCGCGTCCCATGCATCC 75339 Query 44835 CGACTGGGCGCGGGCCCTGCGCGACCAGTGCGTCGACGCCGGTGTGCCGTTCCTGTTTAA 44894 ||||||||||| ||||||||||||||||| | || || | | ||| |||| || Sbjct 75338 CGACTGGGCGCTCAGCCTGCGCGACCAGTGCGAGGCCGTGGGCACGGCCTTCATGTTCAA 75279 Query 44895 GCAGTTTGGCGAGTGG 44910 ||||| ||||||||| Sbjct 75278 GCAGTGGGGCGAGTGG 75263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184818143868628